RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 ADCY9O60503 1353 aa24.55■■□□□ 1.52
CSNK1D-203ENST00000392334 GCC1Q96CN9 775 aa24.55■■□□□ 1.52
CSNK1D-203ENST00000392334 DDIT3P35638 169 aa24.54■■□□□ 1.52
CSNK1D-203ENST00000392334 CACNA1FO60840 1977 aa24.54■■□□□ 1.52
CSNK1D-203ENST00000392334 RXRBP28702 533 aa24.53■■□□□ 1.52
CSNK1D-203ENST00000392334 COPS6Q7L5N1 327 aa24.53■■□□□ 1.52
CSNK1D-203ENST00000392334 XAGE3Q8WTP9 111 aa24.53■■□□□ 1.52
CSNK1D-203ENST00000392334 SRCIN1Q9C0H9 1055 aa24.53■■□□□ 1.52
CSNK1D-203ENST00000392334 ILDR1Q86SU0 546 aaPredicted RBP24.52■■□□□ 1.52
CSNK1D-203ENST00000392334 RBM42Q9BTD8 480 aaKnown RBP24.52■■□□□ 1.52
CSNK1D-203ENST00000392334 BEND3Q5T5X7 828 aa24.52■■□□□ 1.52
CSNK1D-203ENST00000392334 CEP85Q6P2H3 762 aa24.52■■□□□ 1.52
CSNK1D-203ENST00000392334 KSR2Q6VAB6 950 aa24.52■■□□□ 1.52
CSNK1D-203ENST00000392334 USP44Q9H0E7 712 aa24.52■■□□□ 1.52
CSNK1D-203ENST00000392334 A1BGP04217 495 aa24.51■■□□□ 1.51
CSNK1D-203ENST00000392334 LNPKQ9C0E8 428 aa24.51■■□□□ 1.51
CSNK1D-203ENST00000392334 KRT27Q7Z3Y8 459 aa24.5■■□□□ 1.51
CSNK1D-203ENST00000392334 CIZ1Q9ULV3 898 aaPredicted RBP24.5■■□□□ 1.51
CSNK1D-203ENST00000392334 CWF19L2Q2TBE0 894 aaKnown RBP24.49■■□□□ 1.51
CSNK1D-203ENST00000392334 RIC3Q7Z5B4 369 aa24.49■■□□□ 1.51
CSNK1D-203ENST00000392334 ANKRD44Q8N8A2 993 aa24.49■■□□□ 1.51
CSNK1D-203ENST00000392334 SPRYD3Q8NCJ5 442 aa24.49■■□□□ 1.51
CSNK1D-203ENST00000392334 ATP10DQ9P241 1426 aa24.49■■□□□ 1.51
CSNK1D-203ENST00000392334 GOLGA6L3A6NEY3 463 aa24.49■■□□□ 1.51
CSNK1D-203ENST00000392334 DDX11L8A8MPP1 907 aa24.49■■□□□ 1.51
CSNK1D-203ENST00000392334 GNAI2P04899 355 aa24.49■■□□□ 1.51
CSNK1D-203ENST00000392334 LRP10Q7Z4F1 713 aa24.49■■□□□ 1.51
CSNK1D-203ENST00000392334 SLC4A9Q96Q91 983 aa24.49■■□□□ 1.51
CSNK1D-203ENST00000392334 SBF2Q86WG5 1849 aa24.48■■□□□ 1.51
CSNK1D-203ENST00000392334 NBPF26B4DH59 902 aa24.48■■□□□ 1.51
CSNK1D-203ENST00000392334 DDX58O95786 925 aaKnown RBP24.48■■□□□ 1.51
CSNK1D-203ENST00000392334 NBPF14Q5TI25 921 aa24.48■■□□□ 1.51
CSNK1D-203ENST00000392334 NBPF10Q6P3W6 841 aaKnown RBP24.48■■□□□ 1.51
CSNK1D-203ENST00000392334 NBPF15Q8N660 670 aa24.48■■□□□ 1.51
CSNK1D-203ENST00000392334 GNAI3P08754 354 aa24.47■■□□□ 1.51
CSNK1D-203ENST00000392334 NBPF7P0C2Y1 421 aaPredicted RBP24.47■■□□□ 1.51
CSNK1D-203ENST00000392334 ANKRD45Q5TZF3 282 aa24.47■■□□□ 1.51
CSNK1D-203ENST00000392334 RPAP2Q8IXW5 612 aaPredicted RBP24.47■■□□□ 1.51
CSNK1D-203ENST00000392334 LRRFIP2Q9Y608 721 aaKnown RBP24.47■■□□□ 1.51
CSNK1D-203ENST00000392334 TRAK2O60296 914 aa24.47■■□□□ 1.51
CSNK1D-203ENST00000392334 PXDNLA1KZ92 1463 aa24.46■■□□□ 1.51
CSNK1D-203ENST00000392334 UBTFL1P0CB47 393 aaPredicted RBP24.46■■□□□ 1.51
CSNK1D-203ENST00000392334 APBB1O00213 710 aa24.45■■□□□ 1.51
CSNK1D-203ENST00000392334 DNAJC10Q8IXB1 793 aa24.45■■□□□ 1.51
CSNK1D-203ENST00000392334 ZNF330Q9Y3S2 320 aaPredicted RBP24.45■■□□□ 1.5
CSNK1D-203ENST00000392334 XRCC6P12956 609 aaKnown RBP eCLIP24.44■■□□□ 1.53e-10■□□□□ 9.9
CSNK1D-203ENST00000392334 ANKRD13DQ6ZTN6 518 aa24.44■■□□□ 1.5
CSNK1D-203ENST00000392334 ISY1Q9ULR0 285 aaKnown RBP24.44■■□□□ 1.5
CSNK1D-203ENST00000392334 NHSQ6T4R5 1651 aa24.44■■□□□ 1.5
CSNK1D-203ENST00000392334 LAMB4A4D0S4 1761 aa24.44■■□□□ 1.5
CSNK1D-203ENST00000392334 BTAF1O14981 1849 aa24.44■■□□□ 1.5
CSNK1D-203ENST00000392334 PALLDQ8WX93 1383 aa24.43■■□□□ 1.5
CSNK1D-203ENST00000392334 PNMA6EA0A0J9YXQ4 647 aa24.42■■□□□ 1.5
CSNK1D-203ENST00000392334 KIF2CQ99661 725 aa24.42■■□□□ 1.5
CSNK1D-203ENST00000392334 MYD88Q99836 296 aa24.42■■□□□ 1.5
CSNK1D-203ENST00000392334 DCTPP1Q9H773 170 aa24.42■■□□□ 1.5
CSNK1D-203ENST00000392334 EIF5BO60841 1220 aaKnown RBP24.41■■□□□ 1.5
CSNK1D-203ENST00000392334 TTLL7Q6ZT98 887 aa24.41■■□□□ 1.5
CSNK1D-203ENST00000392334 VSIG10Q8N0Z9 540 aa24.41■■□□□ 1.5
CSNK1D-203ENST00000392334 C9orf78Q9NZ63 289 aaPredicted RBP24.41■■□□□ 1.5
CSNK1D-203ENST00000392334 IGKV5-2P06315 115 aa24.4■■□□□ 1.5
CSNK1D-203ENST00000392334 FAM196AQ6ZSG2 479 aa24.4■■□□□ 1.5
CSNK1D-203ENST00000392334 LOC102724428A0A0B4J2F2 783 aa24.4■■□□□ 1.5
CSNK1D-203ENST00000392334 KCNQ4P56696 695 aa24.4■■□□□ 1.5
CSNK1D-203ENST00000392334 SIK1P57059 783 aa24.4■■□□□ 1.5
CSNK1D-203ENST00000392334 LINS1Q8NG48 757 aa24.4■■□□□ 1.5
CSNK1D-203ENST00000392334 ATP5J2-PTCD1G3V325 749 aa24.39■■□□□ 1.49
CSNK1D-203ENST00000392334 PTMSP20962 102 aa24.39■■□□□ 1.49
CSNK1D-203ENST00000392334 MRE11P49959 708 aa24.39■■□□□ 1.49
CSNK1D-203ENST00000392334 TRIM37O94972 964 aa24.38■■□□□ 1.49
CSNK1D-203ENST00000392334 ATP6V1AP38606 617 aa24.38■■□□□ 1.49
CSNK1D-203ENST00000392334 NEXNQ0ZGT2 675 aa24.38■■□□□ 1.49
CSNK1D-203ENST00000392334 RAB3GAP1Q15042 981 aa24.38■■□□□ 1.49
CSNK1D-203ENST00000392334 ARXQ96QS3 562 aa24.38■■□□□ 1.49
CSNK1D-203ENST00000392334 METTL22Q9BUU2 404 aaPredicted RBP24.38■■□□□ 1.49
CSNK1D-203ENST00000392334 HMMRO75330 724 aa24.37■■□□□ 1.49
CSNK1D-203ENST00000392334 ALDH1L1O75891 902 aa24.37■■□□□ 1.49
CSNK1D-203ENST00000392334 ATP8B2P98198 1209 aa24.37■■□□□ 1.49
CSNK1D-203ENST00000392334 TBC1D9Q6ZT07 1266 aa24.37■■□□□ 1.49
CSNK1D-203ENST00000392334 JARID2Q92833 1246 aaPredicted RBP24.37■■□□□ 1.49
CSNK1D-203ENST00000392334 ZBTB3Q9H5J0 574 aa24.37■■□□□ 1.49
CSNK1D-203ENST00000392334 TJP1Q07157 1748 aa24.37■■□□□ 1.49
CSNK1D-203ENST00000392334 SMARCA5O60264 1052 aaPredicted RBP24.37■■□□□ 1.49
CSNK1D-203ENST00000392334 SMARCC1Q92922 1105 aaPredicted RBP24.37■■□□□ 1.49
CSNK1D-203ENST00000392334 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.37■■□□□ 1.49
CSNK1D-203ENST00000392334 EXOC6BQ9Y2D4 811 aa24.37■■□□□ 1.49
CSNK1D-203ENST00000392334 ERBB4Q15303 1308 aa24.36■■□□□ 1.49
CSNK1D-203ENST00000392334 STARD3NLO95772 234 aa24.36■■□□□ 1.49
CSNK1D-203ENST00000392334 ITPK1Q13572 414 aa24.36■■□□□ 1.49
CSNK1D-203ENST00000392334 BCL11BQ9C0K0 894 aaPredicted RBP24.36■■□□□ 1.49
CSNK1D-203ENST00000392334 NEURL1BA8MQ27 555 aa24.35■■□□□ 1.49
CSNK1D-203ENST00000392334 CYP19A1P11511 503 aaPredicted RBP24.35■■□□□ 1.49
CSNK1D-203ENST00000392334 RRAGDQ9NQL2 400 aaPredicted RBP24.35■■□□□ 1.49
CSNK1D-203ENST00000392334 PPP1R42Q7Z4L9 355 aa24.35■■□□□ 1.49
CSNK1D-203ENST00000392334 C16orf71Q8IYS4 520 aaPredicted RBP24.35■■□□□ 1.49
CSNK1D-203ENST00000392334 PLBD2Q8NHP8 589 aa24.35■■□□□ 1.49
CSNK1D-203ENST00000392334 TNPO1Q92973 898 aaKnown RBP24.35■■□□□ 1.49
CSNK1D-203ENST00000392334 GBP4Q96PP9 640 aa24.35■■□□□ 1.49
CSNK1D-203ENST00000392334 TEX13AQ9BXU3 409 aaPredicted RBP24.35■■□□□ 1.49
CSNK1D-203ENST00000392334 N4BP2Q86UW6 1770 aaPredicted RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms