RNA–Protein interactions for RNA: ENST00000390439.2

TRAV13-2-201, Transcript of T cell receptor alpha variable 13-2, humanhuman

APPRIS P1 BASIC

Gene TRAV13-2, Length 410 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2-201ENST00000390439 DLEC1Q9Y238 1755 aa13.02□□□□□ -0.32
TRAV13-2-201ENST00000390439 PER1O15534 1290 aaPredicted RBP13.02□□□□□ -0.33
TRAV13-2-201ENST00000390439 NPR1P16066 1061 aa13.02□□□□□ -0.33
TRAV13-2-201ENST00000390439 CCDC93Q567U6 631 aa13.02□□□□□ -0.33
TRAV13-2-201ENST00000390439 TPTE2Q6XPS3 522 aa13.02□□□□□ -0.33
TRAV13-2-201ENST00000390439 KIF7Q2M1P5 1343 aa13.02□□□□□ -0.33
TRAV13-2-201ENST00000390439 RTKN2Q8IZC4 609 aa13.01□□□□□ -0.33
TRAV13-2-201ENST00000390439 RTF1Q92541 710 aaKnown RBP13.01□□□□□ -0.33
TRAV13-2-201ENST00000390439 L3MBTL3Q96JM7 780 aaPredicted RBP13.01□□□□□ -0.33
TRAV13-2-201ENST00000390439 CFAP53Q96M91 514 aa13.01□□□□□ -0.33
TRAV13-2-201ENST00000390439 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
TRAV13-2-201ENST00000390439 CCDC88AQ3V6T2 1871 aa13□□□□□ -0.33
TRAV13-2-201ENST00000390439 TMEM88BA6NKF7 163 aa13□□□□□ -0.33
TRAV13-2-201ENST00000390439 SNRPA1P09661 255 aaKnown RBP13□□□□□ -0.33
TRAV13-2-201ENST00000390439 FKBP4Q02790 459 aaKnown RBP eCLIP13□□□□□ -0.33
TRAV13-2-201ENST00000390439 CNGB1Q14028 1251 aaPredicted RBP13□□□□□ -0.33
TRAV13-2-201ENST00000390439 EAPPQ56P03 285 aaPredicted RBP13□□□□□ -0.33
TRAV13-2-201ENST00000390439 TAF1DQ9H5J8 278 aaPredicted RBP13□□□□□ -0.33
TRAV13-2-201ENST00000390439 NUDCQ9Y266 331 aa13□□□□□ -0.33
TRAV13-2-201ENST00000390439 TIAM2Q8IVF5 1701 aa12.99□□□□□ -0.33
TRAV13-2-201ENST00000390439 CNTNAP1P78357 1384 aa12.99□□□□□ -0.33
TRAV13-2-201ENST00000390439 RGL2O15211 777 aa12.99□□□□□ -0.33
TRAV13-2-201ENST00000390439 POTEIP0CG38 1075 aa12.99□□□□□ -0.33
TRAV13-2-201ENST00000390439 POTEJP0CG39 1038 aa12.99□□□□□ -0.33
TRAV13-2-201ENST00000390439 GTF2E1P29083 439 aaPredicted RBP12.99□□□□□ -0.33
TRAV13-2-201ENST00000390439 ALDH1B1P30837 517 aa12.99□□□□□ -0.33
TRAV13-2-201ENST00000390439 CTCFP49711 727 aaPredicted RBP12.99□□□□□ -0.33
TRAV13-2-201ENST00000390439 PNMA8AQ86V59 439 aaPredicted RBP12.99□□□□□ -0.33
TRAV13-2-201ENST00000390439 C7orf43Q8WVR3 580 aa12.99□□□□□ -0.33
TRAV13-2-201ENST00000390439 PRDM10Q9NQV6 1147 aa12.99□□□□□ -0.33
TRAV13-2-201ENST00000390439 HACL1Q9UJ83 578 aa12.99□□□□□ -0.33
TRAV13-2-201ENST00000390439 USP16Q9Y5T5 823 aa12.99□□□□□ -0.33
TRAV13-2-201ENST00000390439 CEMIPQ8WUJ3 1361 aa12.98□□□□□ -0.33
TRAV13-2-201ENST00000390439 NPC1L1Q9UHC9 1359 aa12.98□□□□□ -0.33
TRAV13-2-201ENST00000390439 NIP7Q9Y221 180 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRAV13-2-201ENST00000390439 UBR2Q8IWV8 1755 aa12.98□□□□□ -0.33
TRAV13-2-201ENST00000390439 PASKQ96RG2 1323 aa12.97□□□□□ -0.33
TRAV13-2-201ENST00000390439 KLRG2A4D1S0 409 aaPredicted RBP12.97□□□□□ -0.33
TRAV13-2-201ENST00000390439 FOXN1O15353 648 aa12.97□□□□□ -0.33
TRAV13-2-201ENST00000390439 KCNQ3O43525 872 aa12.97□□□□□ -0.33
TRAV13-2-201ENST00000390439 PRKAR2BP31323 418 aa12.97□□□□□ -0.33
TRAV13-2-201ENST00000390439 ZNF277Q9NRM2 450 aaPredicted RBP12.97□□□□□ -0.33
TRAV13-2-201ENST00000390439 FER1L6Q2WGJ9 1857 aa12.97□□□□□ -0.33
TRAV13-2-201ENST00000390439 DICER1Q9UPY3 1922 aaKnown RBP12.96□□□□□ -0.33
TRAV13-2-201ENST00000390439 EPHX2P34913 555 aa12.96□□□□□ -0.33
TRAV13-2-201ENST00000390439 VEGFBP49765 207 aa12.96□□□□□ -0.33
TRAV13-2-201ENST00000390439 JDP2Q8WYK2 163 aa12.96□□□□□ -0.33
TRAV13-2-201ENST00000390439 PHACTR3Q96KR7 559 aa12.96□□□□□ -0.33
TRAV13-2-201ENST00000390439 ANKRD31Q8N7Z5 1873 aa12.95□□□□□ -0.34
TRAV13-2-201ENST00000390439 SLX4Q8IY92 1834 aa12.95□□□□□ -0.34
TRAV13-2-201ENST00000390439 FAM177BA6PVY3 158 aa12.95□□□□□ -0.34
TRAV13-2-201ENST00000390439 ITGBL1O95965 494 aaPredicted RBP12.95□□□□□ -0.34
TRAV13-2-201ENST00000390439 IARSP41252 1262 aaKnown RBP12.95□□□□□ -0.34
TRAV13-2-201ENST00000390439 PIP4K2AP48426 406 aaPredicted RBP12.95□□□□□ -0.34
TRAV13-2-201ENST00000390439 DEFB115Q30KQ5 88 aa12.95□□□□□ -0.34
TRAV13-2-201ENST00000390439 CC2D2BQ6DHV5 1058 aa12.95□□□□□ -0.34
TRAV13-2-201ENST00000390439 SYNE4Q8N205 404 aa12.95□□□□□ -0.34
TRAV13-2-201ENST00000390439 NYXQ9GZU5 481 aa12.95□□□□□ -0.34
TRAV13-2-201ENST00000390439 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
TRAV13-2-201ENST00000390439 SCN7AQ01118 1682 aa12.95□□□□□ -0.34
TRAV13-2-201ENST00000390439 VIRMAQ69YN4 1812 aaKnown RBP12.95□□□□□ -0.34
TRAV13-2-201ENST00000390439 FZD9O00144 591 aa12.94□□□□□ -0.34
TRAV13-2-201ENST00000390439 HTATSF1O43719 755 aaKnown RBP12.94□□□□□ -0.34
TRAV13-2-201ENST00000390439 U2AF1L5P0DN76 240 aaPredicted RBP12.94□□□□□ -0.34
TRAV13-2-201ENST00000390439 EIF6P56537 245 aaKnown RBP12.94□□□□□ -0.34
TRAV13-2-201ENST00000390439 U2AF1Q01081 240 aaKnown RBP eCLIP12.94□□□□□ -0.34
TRAV13-2-201ENST00000390439 MAP2K1Q02750 393 aaPredicted RBP12.94□□□□□ -0.34
TRAV13-2-201ENST00000390439 GRIPAP1Q4V328 841 aa12.94□□□□□ -0.34
TRAV13-2-201ENST00000390439 CNTROBQ8N137 903 aa12.94□□□□□ -0.34
TRAV13-2-201ENST00000390439 GPC2Q8N158 579 aa12.94□□□□□ -0.34
TRAV13-2-201ENST00000390439 WBP1LQ9NX94 342 aa12.94□□□□□ -0.34
TRAV13-2-201ENST00000390439 ZNF541Q9H0D2 1346 aa12.93□□□□□ -0.34
TRAV13-2-201ENST00000390439 NEFMP07197 916 aa12.93□□□□□ -0.34
TRAV13-2-201ENST00000390439 LMOD1P29536 600 aaPredicted RBP12.93□□□□□ -0.34
TRAV13-2-201ENST00000390439 TAF7Q15545 349 aaPredicted RBP12.93□□□□□ -0.34
TRAV13-2-201ENST00000390439 MCM10Q7L590 875 aa12.93□□□□□ -0.34
TRAV13-2-201ENST00000390439 TMX4Q9H1E5 349 aaPredicted RBP12.93□□□□□ -0.34
TRAV13-2-201ENST00000390439 ABT1Q9ULW3 272 aaKnown RBP12.93□□□□□ -0.34
TRAV13-2-201ENST00000390439 COL3A1P02461 1466 aaPredicted RBP12.92□□□□□ -0.34
TRAV13-2-201ENST00000390439 PRAMEF22A3QJZ6 481 aa12.92□□□□□ -0.34
TRAV13-2-201ENST00000390439 COL11A2P13942 1736 aaPredicted RBP12.92□□□□□ -0.34
TRAV13-2-201ENST00000390439 MAP1SQ66K74 1059 aaPredicted RBP12.92□□□□□ -0.34
TRAV13-2-201ENST00000390439 PSMD1Q99460 953 aa12.92□□□□□ -0.34
TRAV13-2-201ENST00000390439 BEGAINQ9BUH8 593 aa12.92□□□□□ -0.34
TRAV13-2-201ENST00000390439 SCN4AP35499 1836 aa12.92□□□□□ -0.34
TRAV13-2-201ENST00000390439 RNF123Q5XPI4 1314 aa12.91□□□□□ -0.34
TRAV13-2-201ENST00000390439 RASSF10A6NK89 507 aa12.91□□□□□ -0.34
TRAV13-2-201ENST00000390439 NBPF26B4DH59 902 aa12.91□□□□□ -0.34
TRAV13-2-201ENST00000390439 ERVV-1B6SEH8 477 aa12.91□□□□□ -0.34
TRAV13-2-201ENST00000390439 LBX1P52954 281 aa12.91□□□□□ -0.34
TRAV13-2-201ENST00000390439 NBPF10Q6P3W6 841 aaKnown RBP12.91□□□□□ -0.34
TRAV13-2-201ENST00000390439 OLFM4Q6UX06 510 aa12.91□□□□□ -0.34
TRAV13-2-201ENST00000390439 NBPF15Q8N660 670 aa12.91□□□□□ -0.34
TRAV13-2-201ENST00000390439 RPGRQ92834 1020 aaKnown RBP12.91□□□□□ -0.34
TRAV13-2-201ENST00000390439 GJA3Q9Y6H8 435 aa12.91□□□□□ -0.34
TRAV13-2-201ENST00000390439 HLFQ16534 295 aa12.9□□□□□ -0.34
TRAV13-2-201ENST00000390439 KIF6Q6ZMV9 814 aa12.9□□□□□ -0.34
TRAV13-2-201ENST00000390439 NGEFQ8N5V2 710 aa12.9□□□□□ -0.34
TRAV13-2-201ENST00000390439 PNISRQ8TF01 805 aaKnown RBP12.9□□□□□ -0.34
TRAV13-2-201ENST00000390439 WDR33Q9C0J8 1336 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms