RNA–Protein interactions for RNA: ENST00000389463.8

LAMA4-205, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-205ENST00000389463 CLEC11AQ9Y240 323 aa12.89□□□□□ -0.35
LAMA4-205ENST00000389463 TTLL5Q6EMB2 1281 aa12.88□□□□□ -0.35
LAMA4-205ENST00000389463 TPTE2Q6XPS3 522 aa12.88□□□□□ -0.35
LAMA4-205ENST00000389463 ZGPATQ8N5A5 531 aaKnown RBP12.88□□□□□ -0.35
LAMA4-205ENST00000389463 MNS1Q8NEH6 495 aa12.88□□□□□ -0.35
LAMA4-205ENST00000389463 ECHDC1Q9NTX5 307 aa12.88□□□□□ -0.35
LAMA4-205ENST00000389463 MYCNP04198 464 aaPredicted RBP12.88□□□□□ -0.35
LAMA4-205ENST00000389463 ZRANB1Q9UGI0 708 aa12.88□□□□□ -0.35
LAMA4-205ENST00000389463 ASXL1Q8IXJ9 1541 aa12.88□□□□□ -0.35
LAMA4-205ENST00000389463 IFIT3O14879 490 aaKnown RBP12.88□□□□□ -0.35
LAMA4-205ENST00000389463 CATIPQ7Z7H3 387 aa12.88□□□□□ -0.35
LAMA4-205ENST00000389463 SERPINC1P01008 464 aa12.88□□□□□ -0.35
LAMA4-205ENST00000389463 OGFOD1Q8N543 542 aa12.88□□□□□ -0.35
LAMA4-205ENST00000389463 PUS7Q96PZ0 661 aaKnown RBP12.88□□□□□ -0.35
LAMA4-205ENST00000389463 SNRKQ9NRH2 765 aa12.88□□□□□ -0.35
LAMA4-205ENST00000389463 SHANK2Q9UPX8 1470 aa12.88□□□□□ -0.35
LAMA4-205ENST00000389463 TRIM27P14373 513 aa12.88□□□□□ -0.35
LAMA4-205ENST00000389463 DCAF5Q96JK2 942 aa12.88□□□□□ -0.35
LAMA4-205ENST00000389463 RUFY1Q96T51 708 aa12.88□□□□□ -0.35
LAMA4-205ENST00000389463 CRNKL1Q9BZJ0 848 aaKnown RBP12.88□□□□□ -0.35
LAMA4-205ENST00000389463 PRAG1Q86YV5 1406 aa12.88□□□□□ -0.35
LAMA4-205ENST00000389463 TRIM21P19474 475 aaKnown RBP12.87□□□□□ -0.35
LAMA4-205ENST00000389463 NFATC2IPQ8NCF5 419 aa12.87□□□□□ -0.35
LAMA4-205ENST00000389463 STK32BQ9NY57 414 aa12.87□□□□□ -0.35
LAMA4-205ENST00000389463 LUC7LQ9NQ29 371 aaKnown RBP12.87□□□□□ -0.35
LAMA4-205ENST00000389463 YTHDC2Q9H6S0 1430 aaKnown RBP12.87□□□□□ -0.35
LAMA4-205ENST00000389463 C16orf71Q8IYS4 520 aaPredicted RBP12.86□□□□□ -0.35
LAMA4-205ENST00000389463 MYO6Q9UM54 1294 aa12.86□□□□□ -0.35
LAMA4-205ENST00000389463 TRAK2O60296 914 aa12.86□□□□□ -0.35
LAMA4-205ENST00000389463 CDR1P51861 262 aa12.86□□□□□ -0.35
LAMA4-205ENST00000389463 ZNF804AQ7Z570 1209 aa12.86□□□□□ -0.35
LAMA4-205ENST00000389463 IP6K1Q92551 441 aa12.86□□□□□ -0.35
LAMA4-205ENST00000389463 CEP170Q5SW79 1584 aa12.86□□□□□ -0.35
LAMA4-205ENST00000389463 TSPY2A6NKD2 308 aa12.86□□□□□ -0.35
LAMA4-205ENST00000389463 CCDC192P0DO97 292 aa12.86□□□□□ -0.35
LAMA4-205ENST00000389463 PTPRKQ15262 1439 aa12.86□□□□□ -0.35
LAMA4-205ENST00000389463 GOLGA8AA7E2F4 631 aa12.86□□□□□ -0.35
LAMA4-205ENST00000389463 GOLGA8BA8MQT2 603 aa12.86□□□□□ -0.35
LAMA4-205ENST00000389463 PPFIBP1Q86W92 1011 aa12.86□□□□□ -0.35
LAMA4-205ENST00000389463 NASPP49321 788 aaPredicted RBP12.85□□□□□ -0.35
LAMA4-205ENST00000389463 SSRP1Q08945 709 aaKnown RBP12.85□□□□□ -0.35
LAMA4-205ENST00000389463 TCOF1Q13428 1488 aaKnown RBP12.85□□□□□ -0.35
LAMA4-205ENST00000389463 ATP7AQ04656 1500 aa12.85□□□□□ -0.35
LAMA4-205ENST00000389463 MTHFSDQ2M296 383 aaKnown RBP12.85□□□□□ -0.35
LAMA4-205ENST00000389463 DNAI2Q9GZS0 605 aa12.85□□□□□ -0.35
LAMA4-205ENST00000389463 DEF6Q9H4E7 631 aa12.85□□□□□ -0.35
LAMA4-205ENST00000389463 POLKQ9UBT6 870 aa12.85□□□□□ -0.35
LAMA4-205ENST00000389463 HOXC9P31274 260 aa12.85□□□□□ -0.35
LAMA4-205ENST00000389463 TRAPPC3LQ5T215 181 aa12.85□□□□□ -0.35
LAMA4-205ENST00000389463 RAB34Q9BZG1 259 aa12.85□□□□□ -0.35
LAMA4-205ENST00000389463 ALDH1L1O75891 902 aa12.85□□□□□ -0.35
LAMA4-205ENST00000389463 NFKBIBQ15653 356 aa12.85□□□□□ -0.35
LAMA4-205ENST00000389463 KSR2Q6VAB6 950 aa12.85□□□□□ -0.35
LAMA4-205ENST00000389463 KAT14Q9H8E8 782 aa12.85□□□□□ -0.35
LAMA4-205ENST00000389463 CCDC39Q9UFE4 941 aa12.85□□□□□ -0.35
LAMA4-205ENST00000389463 KIF5BP33176 963 aa12.85□□□□□ -0.35
LAMA4-205ENST00000389463 CCDC83Q8IWF9 413 aa12.85□□□□□ -0.35
LAMA4-205ENST00000389463 JDP2Q8WYK2 163 aa12.85□□□□□ -0.35
LAMA4-205ENST00000389463 PHAXQ9H814 394 aaKnown RBP12.85□□□□□ -0.35
LAMA4-205ENST00000389463 DESP17661 470 aa12.84□□□□□ -0.35
LAMA4-205ENST00000389463 MPHOSPH6Q99547 160 aaKnown RBP12.84□□□□□ -0.35
LAMA4-205ENST00000389463 CCP110O43303 1012 aa12.84□□□□□ -0.35
LAMA4-205ENST00000389463 NLRP5P59047 1200 aa12.84□□□□□ -0.35
LAMA4-205ENST00000389463 TMEM266Q2M3C6 531 aa12.84□□□□□ -0.35
LAMA4-205ENST00000389463 MAP3K5Q99683 1374 aa12.84□□□□□ -0.35
LAMA4-205ENST00000389463 ATP2B3Q16720 1220 aa12.84□□□□□ -0.35
LAMA4-205ENST00000389463 CCDC82Q8N4S0 544 aa12.84□□□□□ -0.35
LAMA4-205ENST00000389463 CCDC12Q8WUD4 166 aaPredicted RBP12.84□□□□□ -0.35
LAMA4-205ENST00000389463 F8W031 263 aaPredicted RBP12.84□□□□□ -0.35
LAMA4-205ENST00000389463 TXLNBQ8N3L3 684 aa12.84□□□□□ -0.35
LAMA4-205ENST00000389463 GNPATO15228 680 aa12.84□□□□□ -0.35
LAMA4-205ENST00000389463 NF2P35240 595 aa12.84□□□□□ -0.35
LAMA4-205ENST00000389463 MFSD6Q6ZSS7 791 aa12.84□□□□□ -0.35
LAMA4-205ENST00000389463 CCDC194A0A1B0GVG4 234 aa12.83□□□□□ -0.36
LAMA4-205ENST00000389463 C8orf76Q96K31 380 aa12.83□□□□□ -0.36
LAMA4-205ENST00000389463 ZC3H12CQ9C0D7 883 aaKnown RBP12.83□□□□□ -0.36
LAMA4-205ENST00000389463 PPP1R12BO60237 982 aaPredicted RBP12.83□□□□□ -0.36
LAMA4-205ENST00000389463 GRM8O00222 908 aa12.83□□□□□ -0.36
LAMA4-205ENST00000389463 SLC4A8Q2Y0W8 1093 aa12.83□□□□□ -0.36
LAMA4-205ENST00000389463 SH2B1Q9NRF2 756 aaPredicted RBP12.83□□□□□ -0.36
LAMA4-205ENST00000389463 BAG4O95429 457 aaKnown RBP12.83□□□□□ -0.36
LAMA4-205ENST00000389463 EYA3Q99504 573 aa12.83□□□□□ -0.36
LAMA4-205ENST00000389463 CCNL1Q9UK58 526 aaPredicted RBP12.83□□□□□ -0.36
LAMA4-205ENST00000389463 CBFA2T2O43439 604 aa12.82□□□□□ -0.36
LAMA4-205ENST00000389463 CYP7A1P22680 504 aa12.82□□□□□ -0.36
LAMA4-205ENST00000389463 ACBD3Q9H3P7 528 aa12.82□□□□□ -0.36
LAMA4-205ENST00000389463 SEPT11Q9NVA2 429 aaKnown RBP12.82□□□□□ -0.36
LAMA4-205ENST00000389463 DHX8Q14562 1220 aaKnown RBP12.82□□□□□ -0.36
LAMA4-205ENST00000389463 TMEM67Q5HYA8 995 aa12.82□□□□□ -0.36
LAMA4-205ENST00000389463 LMBR1LQ6UX01 489 aa12.82□□□□□ -0.36
LAMA4-205ENST00000389463 EYA1Q99502 592 aa12.82□□□□□ -0.36
LAMA4-205ENST00000389463 BACH2Q9BYV9 841 aa12.82□□□□□ -0.36
LAMA4-205ENST00000389463 ZFYVE16Q7Z3T8 1539 aa12.82□□□□□ -0.36
LAMA4-205ENST00000389463 ZFYVE9O95405 1425 aa12.82□□□□□ -0.36
LAMA4-205ENST00000389463 MRE11P49959 708 aa12.82□□□□□ -0.36
LAMA4-205ENST00000389463 PPP4R3BQ5MIZ7 849 aa12.82□□□□□ -0.36
LAMA4-205ENST00000389463 ARGLU1Q9NWB6 273 aaPredicted RBP12.82□□□□□ -0.36
LAMA4-205ENST00000389463 ORAI2Q96SN7 254 aa12.82□□□□□ -0.36
LAMA4-205ENST00000389463 RNMTO43148 476 aaKnown RBP12.82□□□□□ -0.36
LAMA4-205ENST00000389463 GRM1Q13255 1194 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms