RNA–Protein interactions for RNA: ENST00000383331.4

HCG27-201, Transcript of HLA complex group 27, humanhuman

TSL 1 (best) BASIC

Gene HCG27, Length 1,720 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-201ENST00000383331 KSR2Q6VAB6 950 aa18.55■□□□□ 0.56
HCG27-201ENST00000383331 DDRGK1Q96HY6 314 aa18.55■□□□□ 0.56
HCG27-201ENST00000383331 IBTKQ9P2D0 1353 aaPredicted RBP18.55■□□□□ 0.56
HCG27-201ENST00000383331 ATP8B2P98198 1209 aa18.54■□□□□ 0.56
HCG27-201ENST00000383331 PTF1AQ7RTS3 328 aa18.54■□□□□ 0.56
HCG27-201ENST00000383331 ZBTB47Q9UFB7 747 aaPredicted RBP18.54■□□□□ 0.56
HCG27-201ENST00000383331 ATG3Q9NT62 314 aa18.54■□□□□ 0.56
HCG27-201ENST00000383331 NUP188Q5SRE5 1749 aa18.54■□□□□ 0.56
HCG27-201ENST00000383331 UBTFL1P0CB47 393 aaPredicted RBP18.53■□□□□ 0.56
HCG27-201ENST00000383331 LRRFIP2Q9Y608 721 aaKnown RBP18.53■□□□□ 0.56
HCG27-201ENST00000383331 SBF2Q86WG5 1849 aa18.53■□□□□ 0.56
HCG27-201ENST00000383331 NBPF14Q5TI25 921 aa18.52■□□□□ 0.56
HCG27-201ENST00000383331 LRP10Q7Z4F1 713 aa18.52■□□□□ 0.56
HCG27-201ENST00000383331 BCL11BQ9C0K0 894 aaPredicted RBP18.52■□□□□ 0.56
HCG27-201ENST00000383331 ASAP1Q9ULH1 1129 aa18.52■□□□□ 0.56
HCG27-201ENST00000383331 PTCD1O75127 700 aaKnown RBP18.52■□□□□ 0.55
HCG27-201ENST00000383331 ALDH1L1O75891 902 aa18.52■□□□□ 0.55
HCG27-201ENST00000383331 PLEKHM2Q8IWE5 1019 aa18.52■□□□□ 0.55
HCG27-201ENST00000383331 PRIM1P49642 420 aaKnown RBP18.51■□□□□ 0.55
HCG27-201ENST00000383331 MAP3K2Q9Y2U5 619 aa18.51■□□□□ 0.55
HCG27-201ENST00000383331 PNMA6EA0A0J9YXQ4 647 aa18.5■□□□□ 0.55
HCG27-201ENST00000383331 PLSCR1O15162 318 aa18.5■□□□□ 0.55
HCG27-201ENST00000383331 ERICH6Q7L0X2 663 aa18.5■□□□□ 0.55
HCG27-201ENST00000383331 MYL6BP14649 208 aa18.49■□□□□ 0.55
HCG27-201ENST00000383331 UPF2Q9HAU5 1272 aaKnown RBP18.49■□□□□ 0.55
HCG27-201ENST00000383331 COPS6Q7L5N1 327 aa18.49■□□□□ 0.55
HCG27-201ENST00000383331 LINS1Q8NG48 757 aa18.49■□□□□ 0.55
HCG27-201ENST00000383331 XAGE3Q8WTP9 111 aa18.49■□□□□ 0.55
HCG27-201ENST00000383331 TBC1D32Q96NH3 1257 aa18.49■□□□□ 0.55
HCG27-201ENST00000383331 HDAC5Q9UQL6 1122 aa18.49■□□□□ 0.55
HCG27-201ENST00000383331 CICQ96RK0 1608 aaPredicted RBP18.48■□□□□ 0.55
HCG27-201ENST00000383331 STARD3NLO95772 234 aa18.48■□□□□ 0.55
HCG27-201ENST00000383331 NBPF7P0C2Y1 421 aaPredicted RBP18.48■□□□□ 0.55
HCG27-201ENST00000383331 C16orf71Q8IYS4 520 aaPredicted RBP18.48■□□□□ 0.55
HCG27-201ENST00000383331 SSH3Q8TE77 659 aa18.48■□□□□ 0.55
HCG27-201ENST00000383331 SYTL4Q96C24 671 aaPredicted RBP18.48■□□□□ 0.55
HCG27-201ENST00000383331 SMARCA5O60264 1052 aaPredicted RBP18.47■□□□□ 0.55
HCG27-201ENST00000383331 POLA2Q14181 598 aa18.47■□□□□ 0.55
HCG27-201ENST00000383331 ANKRD13DQ6ZTN6 518 aa18.47■□□□□ 0.55
HCG27-201ENST00000383331 RIC3Q7Z5B4 369 aa18.47■□□□□ 0.55
HCG27-201ENST00000383331 NEXNQ0ZGT2 675 aa18.46■□□□□ 0.55
HCG27-201ENST00000383331 AIMP1Q12904 312 aaKnown RBP18.46■□□□□ 0.55
HCG27-201ENST00000383331 ANP32EQ9BTT0 268 aa18.46■□□□□ 0.55
HCG27-201ENST00000383331 RGPD3A6NKT7 1758 aaPredicted RBP18.46■□□□□ 0.55
HCG27-201ENST00000383331 RGPD4Q7Z3J3 1758 aa18.46■□□□□ 0.55
HCG27-201ENST00000383331 ARFGEF2Q9Y6D5 1785 aa18.46■□□□□ 0.55
HCG27-201ENST00000383331 NBPF26B4DH59 902 aa18.46■□□□□ 0.55
HCG27-201ENST00000383331 KCNQ2O43526 872 aa18.46■□□□□ 0.55
HCG27-201ENST00000383331 TTC22Q5TAA0 569 aa18.46■□□□□ 0.55
HCG27-201ENST00000383331 NBPF10Q6P3W6 841 aaKnown RBP18.46■□□□□ 0.55
HCG27-201ENST00000383331 NBPF15Q8N660 670 aa18.46■□□□□ 0.55
HCG27-201ENST00000383331 PLBD2Q8NHP8 589 aa18.46■□□□□ 0.55
HCG27-201ENST00000383331 SMARCC1Q92922 1105 aaPredicted RBP18.46■□□□□ 0.55
HCG27-201ENST00000383331 RBM42Q9BTD8 480 aaKnown RBP18.46■□□□□ 0.55
HCG27-201ENST00000383331 EXOC6BQ9Y2D4 811 aa18.46■□□□□ 0.55
HCG27-201ENST00000383331 ZNF831Q5JPB2 1677 aa18.45■□□□□ 0.54
HCG27-201ENST00000383331 UTYO14607 1347 aa18.45■□□□□ 0.54
HCG27-201ENST00000383331 GSPT1P15170 499 aaKnown RBP18.45■□□□□ 0.54
HCG27-201ENST00000383331 OTUD7AQ8TE49 926 aaPredicted RBP18.45■□□□□ 0.54
HCG27-201ENST00000383331 ACSBG1Q96GR2 724 aa18.45■□□□□ 0.54
HCG27-201ENST00000383331 METTL22Q9BUU2 404 aaPredicted RBP18.45■□□□□ 0.54
HCG27-201ENST00000383331 TJP1Q07157 1748 aa18.44■□□□□ 0.54
HCG27-201ENST00000383331 APBB1O00213 710 aa18.44■□□□□ 0.54
HCG27-201ENST00000383331 A1BGP04217 495 aa18.44■□□□□ 0.54
HCG27-201ENST00000383331 PPP1R42Q7Z4L9 355 aa18.44■□□□□ 0.54
HCG27-201ENST00000383331 DNAJC10Q8IXB1 793 aa18.44■□□□□ 0.54
HCG27-201ENST00000383331 PROM2Q8N271 834 aa18.44■□□□□ 0.54
HCG27-201ENST00000383331 MTX1Q13505 466 aa18.43■□□□□ 0.54
HCG27-201ENST00000383331 LRRCC1Q9C099 1032 aa18.43■□□□□ 0.54
HCG27-201ENST00000383331 OSBPL3Q9H4L5 887 aa18.43■□□□□ 0.54
HCG27-201ENST00000383331 ANO8Q9HCE9 1232 aaPredicted RBP18.43■□□□□ 0.54
HCG27-201ENST00000383331 CWF19L2Q2TBE0 894 aaKnown RBP18.43■□□□□ 0.54
HCG27-201ENST00000383331 SALL3Q9BXA9 1300 aa18.42■□□□□ 0.54
HCG27-201ENST00000383331 IGKV5-2P06315 115 aa18.42■□□□□ 0.54
HCG27-201ENST00000383331 MFAP1P55081 439 aaKnown RBP18.42■□□□□ 0.54
HCG27-201ENST00000383331 C9orf78Q9NZ63 289 aaPredicted RBP18.42■□□□□ 0.54
HCG27-201ENST00000383331 NHSQ6T4R5 1651 aa18.41■□□□□ 0.54
HCG27-201ENST00000383331 CYP19A1P11511 503 aaPredicted RBP18.41■□□□□ 0.54
HCG27-201ENST00000383331 TXNRD1Q16881 649 aa18.41■□□□□ 0.54
HCG27-201ENST00000383331 SLC4A9Q96Q91 983 aa18.41■□□□□ 0.54
HCG27-201ENST00000383331 GRM8O00222 908 aa18.4■□□□□ 0.54
HCG27-201ENST00000383331 SRGAP3O43295 1099 aa18.4■□□□□ 0.54
HCG27-201ENST00000383331 RAB11FIP3O75154 756 aa18.4■□□□□ 0.54
HCG27-201ENST00000383331 PIP4K2AP48426 406 aaPredicted RBP18.4■□□□□ 0.54
HCG27-201ENST00000383331 TBC1D9Q6ZT07 1266 aa18.4■□□□□ 0.54
HCG27-201ENST00000383331 C22orf23Q9BZE7 217 aa18.4■□□□□ 0.54
HCG27-201ENST00000383331 AFDNP55196 1824 aaKnown RBP18.4■□□□□ 0.54
HCG27-201ENST00000383331 NEURL1BA8MQ27 555 aa18.4■□□□□ 0.54
HCG27-201ENST00000383331 CDC45O75419 566 aa18.4■□□□□ 0.54
HCG27-201ENST00000383331 PDE1AP54750 535 aa18.4■□□□□ 0.54
HCG27-201ENST00000383331 PALLDQ8WX93 1383 aa18.4■□□□□ 0.54
HCG27-201ENST00000383331 TUBGCP6Q96RT7 1819 aa18.39■□□□□ 0.54
HCG27-201ENST00000383331 MYD88Q99836 296 aa18.39■□□□□ 0.53
HCG27-201ENST00000383331 LOC102724428A0A0B4J2F2 783 aa18.38■□□□□ 0.53
HCG27-201ENST00000383331 SIK1P57059 783 aa18.38■□□□□ 0.53
HCG27-201ENST00000383331 SPON1Q9HCB6 807 aa18.38■□□□□ 0.53
HCG27-201ENST00000383331 COL15A1P39059 1388 aa18.37■□□□□ 0.53
HCG27-201ENST00000383331 SURF6O75683 361 aaKnown RBP18.37■□□□□ 0.53
HCG27-201ENST00000383331 GCKRQ14397 625 aa18.37■□□□□ 0.53
HCG27-201ENST00000383331 KAZALD1Q96I82 304 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms