RNA–Protein interactions for RNA: ENST00000382381.7

ABCA3-202, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 6,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-202ENST00000382381 CRACR2AQ9BSW2 395 aa14.99□□□□□ -0.01
ABCA3-202ENST00000382381 RBM25P49756 843 aaKnown RBP14.99□□□□□ -0.01
ABCA3-202ENST00000382381 TMCO3Q6UWJ1 677 aa14.99□□□□□ -0.01
ABCA3-202ENST00000382381 NUP153P49790 1475 aaKnown RBP14.99□□□□□ -0.01
ABCA3-202ENST00000382381 GRM1Q13255 1194 aa14.99□□□□□ -0.01
ABCA3-202ENST00000382381 ANKRD24Q8TF21 1146 aa14.98□□□□□ -0.01
ABCA3-202ENST00000382381 ADAMTS12P58397 1594 aa14.98□□□□□ -0.01
ABCA3-202ENST00000382381 SFPQP23246 707 aaKnown RBP eCLIP14.98□□□□□ -0.01
ABCA3-202ENST00000382381 PDCL2Q8N4E4 241 aa14.98□□□□□ -0.01
ABCA3-202ENST00000382381 ZNF397Q8NF99 534 aaPredicted RBP14.98□□□□□ -0.01
ABCA3-202ENST00000382381 ZNF518AQ6AHZ1 1483 aa14.98□□□□□ -0.01
ABCA3-202ENST00000382381 PRPF4BQ13523 1007 aaKnown RBP14.98□□□□□ -0.01
ABCA3-202ENST00000382381 CAVIN4Q5BKX8 364 aa14.98□□□□□ -0.01
ABCA3-202ENST00000382381 TCERG1LQ5VWI1 586 aa14.98□□□□□ -0.01
ABCA3-202ENST00000382381 SMTNL1A8MU46 457 aa14.98□□□□□ -0.01
ABCA3-202ENST00000382381 C8orf76Q96K31 380 aa14.98□□□□□ -0.01
ABCA3-202ENST00000382381 TRMT112Q9UI30 125 aaKnown RBP14.98□□□□□ -0.01
ABCA3-202ENST00000382381 ATP5J2-PTCD1G3V325 749 aa14.98□□□□□ -0.01
ABCA3-202ENST00000382381 RAB11FIP3O75154 756 aa14.98□□□□□ -0.01
ABCA3-202ENST00000382381 SSFA2P28290 1259 aa14.98□□□□□ -0.01
ABCA3-202ENST00000382381 ZSCAN31Q96LW9 406 aaPredicted RBP14.98□□□□□ -0.01
ABCA3-202ENST00000382381 USP25Q9UHP3 1055 aa14.98□□□□□ -0.01
ABCA3-202ENST00000382381 SPDYE4A6NLX3 237 aa14.97□□□□□ -0.01
ABCA3-202ENST00000382381 NUP88Q99567 741 aaPredicted RBP14.97□□□□□ -0.01
ABCA3-202ENST00000382381 IDEP14735 1019 aa14.97□□□□□ -0.01
ABCA3-202ENST00000382381 LUZP1Q86V48 1076 aa14.97□□□□□ -0.01
ABCA3-202ENST00000382381 CCDC148Q8NFR7 591 aa14.97□□□□□ -0.01
ABCA3-202ENST00000382381 DRC1Q96MC2 740 aa14.97□□□□□ -0.01
ABCA3-202ENST00000382381 C16orf45Q96MC5 204 aaPredicted RBP14.97□□□□□ -0.01
ABCA3-202ENST00000382381 SRRTQ9BXP5 876 aaKnown RBP14.97□□□□□ -0.01
ABCA3-202ENST00000382381 PTPN14Q15678 1187 aa14.97□□□□□ -0.01
ABCA3-202ENST00000382381 TICAM2Q86XR7 235 aa14.97□□□□□ -0.01
ABCA3-202ENST00000382381 ZMYM3Q14202 1370 aa14.97□□□□□ -0.01
ABCA3-202ENST00000382381 ZNF444Q8N0Y2 327 aaPredicted RBP14.97□□□□□ -0.01
ABCA3-202ENST00000382381 RNF216Q9NWF9 866 aaPredicted RBP14.97□□□□□ -0.01
ABCA3-202ENST00000382381 ANXA1P04083 346 aa14.96□□□□□ -0.01
ABCA3-202ENST00000382381 WDR63Q8IWG1 891 aa14.96□□□□□ -0.01
ABCA3-202ENST00000382381 U3KPZ7 1027 aaPredicted RBP14.96□□□□□ -0.01
ABCA3-202ENST00000382381 IFFO1Q0D2I5 559 aa14.96□□□□□ -0.01
ABCA3-202ENST00000382381 KRT32Q14532 448 aa14.96□□□□□ -0.01
ABCA3-202ENST00000382381 PODXL2Q9NZ53 605 aa14.96□□□□□ -0.01
ABCA3-202ENST00000382381 C6orf229H3BNL8 230 aa14.96□□□□□ -0.01
ABCA3-202ENST00000382381 DESP17661 470 aa14.96□□□□□ -0.01
ABCA3-202ENST00000382381 RIMS2Q9UQ26 1411 aa14.96□□□□□ -0.01
ABCA3-202ENST00000382381 IFIT3O14879 490 aaKnown RBP14.96□□□□□ -0.02
ABCA3-202ENST00000382381 NLRP5P59047 1200 aa14.96□□□□□ -0.02
ABCA3-202ENST00000382381 SSH1Q8WYL5 1049 aa14.96□□□□□ -0.02
ABCA3-202ENST00000382381 C14orf93Q9H972 538 aaKnown RBP14.96□□□□□ -0.02
ABCA3-202ENST00000382381 PUF60Q9UHX1 559 aaKnown RBP14.96□□□□□ -0.02
ABCA3-202ENST00000382381 PPP1R12BO60237 982 aaPredicted RBP14.95□□□□□ -0.02
ABCA3-202ENST00000382381 TOP1P11387 765 aaKnown RBP14.95□□□□□ -0.02
ABCA3-202ENST00000382381 WASF1Q92558 559 aa14.95□□□□□ -0.02
ABCA3-202ENST00000382381 SLC12A7Q9Y666 1083 aa14.95□□□□□ -0.02
ABCA3-202ENST00000382381 NFE2L2Q16236 605 aa14.95□□□□□ -0.02
ABCA3-202ENST00000382381 KIF1BPQ96EK5 621 aa14.95□□□□□ -0.02
ABCA3-202ENST00000382381 GOLGA8BA8MQT2 603 aa14.95□□□□□ -0.02
ABCA3-202ENST00000382381 TMCO5BA8MYB1 307 aa14.95□□□□□ -0.02
ABCA3-202ENST00000382381 PUS7Q96PZ0 661 aaKnown RBP14.95□□□□□ -0.02
ABCA3-202ENST00000382381 CTCFLQ8NI51 663 aaPredicted RBP14.95□□□□□ -0.02
ABCA3-202ENST00000382381 COMMD10Q9Y6G5 202 aa14.95□□□□□ -0.02
ABCA3-202ENST00000382381 CASQ1P31415 396 aa14.95□□□□□ -0.02
ABCA3-202ENST00000382381 TERF1P54274 439 aa14.95□□□□□ -0.02
ABCA3-202ENST00000382381 IQCEQ6IPM2 695 aa14.95□□□□□ -0.02
ABCA3-202ENST00000382381 CLIP2Q9UDT6 1046 aa14.95□□□□□ -0.02
ABCA3-202ENST00000382381 RNF187Q5TA31 235 aaPredicted RBP14.94□□□□□ -0.02
ABCA3-202ENST00000382381 TXLNBQ8N3L3 684 aa14.94□□□□□ -0.02
ABCA3-202ENST00000382381 IQSEC3Q9UPP2 1182 aaPredicted RBP14.94□□□□□ -0.02
ABCA3-202ENST00000382381 ZNF213O14771 459 aa14.94□□□□□ -0.02
ABCA3-202ENST00000382381 IFIT5Q13325 482 aaKnown RBP14.94□□□□□ -0.02
ABCA3-202ENST00000382381 SPECC1Q5M775 1068 aa14.94□□□□□ -0.02
ABCA3-202ENST00000382381 FKBP15Q5T1M5 1219 aa14.94□□□□□ -0.02
ABCA3-202ENST00000382381 FAM107BQ9H098 131 aa14.94□□□□□ -0.02
ABCA3-202ENST00000382381 CEP131Q9UPN4 1083 aa14.94□□□□□ -0.02
ABCA3-202ENST00000382381 POTEJP0CG39 1038 aa14.94□□□□□ -0.02
ABCA3-202ENST00000382381 HLTFQ14527 1009 aaKnown RBP eCLIP14.94□□□□□ -0.02
ABCA3-202ENST00000382381 CNNM3Q8NE01 707 aa14.94□□□□□ -0.02
ABCA3-202ENST00000382381 RBM27Q9P2N5 1060 aaKnown RBP14.94□□□□□ -0.02
ABCA3-202ENST00000382381 GOLIM4O00461 696 aa14.94□□□□□ -0.02
ABCA3-202ENST00000382381 FCHSD2O94868 740 aa14.94□□□□□ -0.02
ABCA3-202ENST00000382381 SAMM50Q9Y512 469 aa14.94□□□□□ -0.02
ABCA3-202ENST00000382381 MYO1BO43795 1136 aa14.93□□□□□ -0.02
ABCA3-202ENST00000382381 CTNNA2P26232 953 aa14.93□□□□□ -0.02
ABCA3-202ENST00000382381 NF2P35240 595 aa14.93□□□□□ -0.02
ABCA3-202ENST00000382381 KIAA0556O60303 1618 aa14.93□□□□□ -0.02
ABCA3-202ENST00000382381 LARP1Q6PKG0 1096 aaKnown RBP14.93□□□□□ -0.02
ABCA3-202ENST00000382381 MICU3Q86XE3 530 aa14.93□□□□□ -0.02
ABCA3-202ENST00000382381 DDX17Q92841 729 aaKnown RBP14.93□□□□□ -0.02
ABCA3-202ENST00000382381 WDR62O43379 1518 aa14.93□□□□□ -0.02
ABCA3-202ENST00000382381 KCNA6P17658 529 aa14.93□□□□□ -0.02
ABCA3-202ENST00000382381 TNIP1Q15025 636 aa14.93□□□□□ -0.02
ABCA3-202ENST00000382381 RPAP2Q8IXW5 612 aaPredicted RBP14.93□□□□□ -0.02
ABCA3-202ENST00000382381 NPHP3Q7Z494 1330 aa14.93□□□□□ -0.02
ABCA3-202ENST00000382381 CA8P35219 290 aa14.93□□□□□ -0.02
ABCA3-202ENST00000382381 TMEM87AQ8NBN3 555 aa14.93□□□□□ -0.02
ABCA3-202ENST00000382381 ZNF652Q9Y2D9 606 aa14.93□□□□□ -0.02
ABCA3-202ENST00000382381 A0A087WZG4 1122 aa14.93□□□□□ -0.02
ABCA3-202ENST00000382381 GOLGA8AA7E2F4 631 aa14.93□□□□□ -0.02
ABCA3-202ENST00000382381 KIF5CO60282 957 aa14.93□□□□□ -0.02
ABCA3-202ENST00000382381 PLCD3Q8N3E9 789 aa14.92□□□□□ -0.02
ABCA3-202ENST00000382381 GLRX3O76003 335 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms