RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 NHSQ6T4R5 1651 aa10.02□□□□□ -0.81
ERCC8-202ENST00000381118 LOC102724428A0A0B4J2F2 783 aa10.02□□□□□ -0.81
ERCC8-202ENST00000381118 SIK1P57059 783 aa10.02□□□□□ -0.81
ERCC8-202ENST00000381118 ANKRD44Q8N8A2 993 aa10.02□□□□□ -0.81
ERCC8-202ENST00000381118 ZBTB1Q9Y2K1 713 aa10.02□□□□□ -0.81
ERCC8-202ENST00000381118 MYH14Q7Z406 1995 aaKnown RBP10.01□□□□□ -0.81
ERCC8-202ENST00000381118 ATP5J2-PTCD1G3V325 749 aa10.01□□□□□ -0.81
ERCC8-202ENST00000381118 ONECUT3O60422 494 aaPredicted RBP10.01□□□□□ -0.81
ERCC8-202ENST00000381118 IGKV5-2P06315 115 aa10.01□□□□□ -0.81
ERCC8-202ENST00000381118 CYP19A1P11511 503 aaPredicted RBP10.01□□□□□ -0.81
ERCC8-202ENST00000381118 KCNQ4P56696 695 aa10.01□□□□□ -0.81
ERCC8-202ENST00000381118 RPAP2Q8IXW5 612 aaPredicted RBP10.01□□□□□ -0.81
ERCC8-202ENST00000381118 LINS1Q8NG48 757 aa10.01□□□□□ -0.81
ERCC8-202ENST00000381118 METTL22Q9BUU2 404 aaPredicted RBP10.01□□□□□ -0.81
ERCC8-202ENST00000381118 APBB1O00213 710 aa10.01□□□□□ -0.81
ERCC8-202ENST00000381118 SMC5Q8IY18 1101 aa10.01□□□□□ -0.81
ERCC8-202ENST00000381118 PLBD2Q8NHP8 589 aa10.01□□□□□ -0.81
ERCC8-202ENST00000381118 TSHZ2Q9NRE2 1034 aa10.01□□□□□ -0.81
ERCC8-202ENST00000381118 NEURL1BA8MQ27 555 aa10□□□□□ -0.81
ERCC8-202ENST00000381118 ALDH1L1O75891 902 aa10□□□□□ -0.81
ERCC8-202ENST00000381118 PNMA6EA0A0J9YXQ4 647 aa9.99□□□□□ -0.81
ERCC8-202ENST00000381118 KCNA4P22459 653 aa9.99□□□□□ -0.81
ERCC8-202ENST00000381118 ITPK1Q13572 414 aa9.99□□□□□ -0.81
ERCC8-202ENST00000381118 ANKRD45Q5TZF3 282 aa9.99□□□□□ -0.81
ERCC8-202ENST00000381118 ZNF772Q68DY9 489 aaPredicted RBP9.99□□□□□ -0.81
ERCC8-202ENST00000381118 JARID2Q92833 1246 aaPredicted RBP9.99□□□□□ -0.81
ERCC8-202ENST00000381118 SMARCC1Q92922 1105 aaPredicted RBP9.99□□□□□ -0.81
ERCC8-202ENST00000381118 GCC1Q96CN9 775 aa9.99□□□□□ -0.81
ERCC8-202ENST00000381118 LNPKQ9C0E8 428 aa9.99□□□□□ -0.81
ERCC8-202ENST00000381118 COL5A3P25940 1745 aaPredicted RBP9.99□□□□□ -0.81
ERCC8-202ENST00000381118 NPM2Q86SE8 214 aaKnown RBP9.99□□□□□ -0.81
ERCC8-202ENST00000381118 NUP98P52948 1817 aa9.98□□□□□ -0.81
ERCC8-202ENST00000381118 GRM8O00222 908 aa9.98□□□□□ -0.81
ERCC8-202ENST00000381118 HMMRO75330 724 aa9.98□□□□□ -0.81
ERCC8-202ENST00000381118 CRKLP46109 303 aaKnown RBP9.98□□□□□ -0.81
ERCC8-202ENST00000381118 RTL5Q5HYW3 569 aaPredicted RBP9.98□□□□□ -0.81
ERCC8-202ENST00000381118 KIF6Q6ZMV9 814 aa9.98□□□□□ -0.81
ERCC8-202ENST00000381118 RBM6P78332 1123 aaKnown RBP9.98□□□□□ -0.81
ERCC8-202ENST00000381118 GCKRQ14397 625 aa9.98□□□□□ -0.81
ERCC8-202ENST00000381118 KRT27Q7Z3Y8 459 aa9.98□□□□□ -0.81
ERCC8-202ENST00000381118 TBC1D2BQ9UPU7 963 aa9.98□□□□□ -0.81
ERCC8-202ENST00000381118 EXOC6BQ9Y2D4 811 aa9.98□□□□□ -0.81
ERCC8-202ENST00000381118 PDE4AP27815 886 aa9.97□□□□□ -0.81
ERCC8-202ENST00000381118 ATP8B2P98198 1209 aa9.97□□□□□ -0.81
ERCC8-202ENST00000381118 NUCB1Q02818 461 aa9.97□□□□□ -0.81
ERCC8-202ENST00000381118 PPP1R42Q7Z4L9 355 aa9.97□□□□□ -0.81
ERCC8-202ENST00000381118 CHD1LQ86WJ1 897 aa9.97□□□□□ -0.81
ERCC8-202ENST00000381118 FBXO41Q8TF61 875 aa9.97□□□□□ -0.81
ERCC8-202ENST00000381118 DCTPP1Q9H773 170 aa9.97□□□□□ -0.81
ERCC8-202ENST00000381118 A0A087WZG4 1122 aa9.97□□□□□ -0.81
ERCC8-202ENST00000381118 SRGAP3O43295 1099 aa9.97□□□□□ -0.81
ERCC8-202ENST00000381118 INTS5Q6P9B9 1019 aaKnown RBP9.97□□□□□ -0.81
ERCC8-202ENST00000381118 UBE3BQ7Z3V4 1068 aa9.97□□□□□ -0.81
ERCC8-202ENST00000381118 SUCLG2Q96I99 432 aa9.97□□□□□ -0.81
ERCC8-202ENST00000381118 CCDC87Q9NVE4 849 aa9.97□□□□□ -0.81
ERCC8-202ENST00000381118 CICQ96RK0 1608 aaPredicted RBP9.96□□□□□ -0.81
ERCC8-202ENST00000381118 LY75O60449 1722 aa9.96□□□□□ -0.81
ERCC8-202ENST00000381118 ANKRD36CQ5JPF3 1778 aa9.96□□□□□ -0.81
ERCC8-202ENST00000381118 IL6STP40189 918 aaPredicted RBP9.96□□□□□ -0.82
ERCC8-202ENST00000381118 HLFQ16534 295 aa9.96□□□□□ -0.82
ERCC8-202ENST00000381118 DZIP3Q86Y13 1208 aaKnown RBP9.96□□□□□ -0.82
ERCC8-202ENST00000381118 LINC00116Q8NCU8 138 aa9.96□□□□□ -0.82
ERCC8-202ENST00000381118 BICC1Q9H694 974 aaKnown RBP9.96□□□□□ -0.82
ERCC8-202ENST00000381118 MAP3K15Q6ZN16 1313 aa9.96□□□□□ -0.82
ERCC8-202ENST00000381118 TAF1LQ8IZX4 1826 aa9.96□□□□□ -0.82
ERCC8-202ENST00000381118 ZNF831Q5JPB2 1677 aa9.95□□□□□ -0.82
ERCC8-202ENST00000381118 SMARCA5O60264 1052 aaPredicted RBP9.95□□□□□ -0.82
ERCC8-202ENST00000381118 ZBTB47Q9UFB7 747 aaPredicted RBP9.95□□□□□ -0.82
ERCC8-202ENST00000381118 CCNL1Q9UK58 526 aaPredicted RBP9.95□□□□□ -0.82
ERCC8-202ENST00000381118 RREB1Q92766 1687 aa9.95□□□□□ -0.82
ERCC8-202ENST00000381118 TRIM37O94972 964 aa9.95□□□□□ -0.82
ERCC8-202ENST00000381118 GPTP24298 496 aa9.95□□□□□ -0.82
ERCC8-202ENST00000381118 FAM196AQ6ZSG2 479 aa9.95□□□□□ -0.82
ERCC8-202ENST00000381118 SMIM5Q71RC9 77 aa9.95□□□□□ -0.82
ERCC8-202ENST00000381118 KAZALD1Q96I82 304 aa9.95□□□□□ -0.82
ERCC8-202ENST00000381118 CWC25Q9NXE8 425 aaPredicted RBP9.95□□□□□ -0.82
ERCC8-202ENST00000381118 UTYO14607 1347 aa9.95□□□□□ -0.82
ERCC8-202ENST00000381118 RXRBP28702 533 aa9.94□□□□□ -0.82
ERCC8-202ENST00000381118 EIF5P55010 431 aaKnown RBP9.94□□□□□ -0.82
ERCC8-202ENST00000381118 TCIRG1Q13488 830 aa9.94□□□□□ -0.82
ERCC8-202ENST00000381118 SSH3Q8TE77 659 aa9.94□□□□□ -0.82
ERCC8-202ENST00000381118 SURF6O75683 361 aaKnown RBP9.94□□□□□ -0.82
ERCC8-202ENST00000381118 EPHA10Q5JZY3 1008 aa9.94□□□□□ -0.82
ERCC8-202ENST00000381118 GIGYF2Q6Y7W6 1299 aaKnown RBP9.94□□□□□ -0.82
ERCC8-202ENST00000381118 BCL11BQ9C0K0 894 aaPredicted RBP9.94□□□□□ -0.82
ERCC8-202ENST00000381118 HDAC5Q9UQL6 1122 aa9.94□□□□□ -0.82
ERCC8-202ENST00000381118 COL15A1P39059 1388 aa9.93□□□□□ -0.82
ERCC8-202ENST00000381118 C16orf71Q8IYS4 520 aaPredicted RBP9.93□□□□□ -0.82
ERCC8-202ENST00000381118 CCDC191Q8NCU4 936 aa9.93□□□□□ -0.82
ERCC8-202ENST00000381118 RGS17Q9UGC6 210 aaPredicted RBP9.93□□□□□ -0.82
ERCC8-202ENST00000381118 ISCA1Q9BUE6 129 aa9.92□□□□□ -0.82
ERCC8-202ENST00000381118 PA2G4Q9UQ80 394 aaKnown RBP9.92□□□□□ -0.82
ERCC8-202ENST00000381118 CHMP3Q9Y3E7 222 aa9.92□□□□□ -0.82
ERCC8-202ENST00000381118 POLA2Q14181 598 aa9.92□□□□□ -0.82
ERCC8-202ENST00000381118 POTEAQ6S8J7 498 aa9.92□□□□□ -0.82
ERCC8-202ENST00000381118 KLHDC4Q8TBB5 520 aa9.92□□□□□ -0.82
ERCC8-202ENST00000381118 OTUD7AQ8TE49 926 aaPredicted RBP9.92□□□□□ -0.82
ERCC8-202ENST00000381118 FAM89AQ96GI7 184 aa9.92□□□□□ -0.82
ERCC8-202ENST00000381118 LRRCC1Q9C099 1032 aa9.92□□□□□ -0.82
ERCC8-202ENST00000381118 RBM19Q9Y4C8 960 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 638.8 ms