RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 UTYO14607 1347 aa24.56■■□□□ 1.52
CCM2-202ENST00000381112 DCTPP1Q9H773 170 aa24.55■■□□□ 1.52
CCM2-202ENST00000381112 RGS3P49796 1198 aa24.55■■□□□ 1.52
CCM2-202ENST00000381112 NUCB1Q02818 461 aa24.55■■□□□ 1.52
CCM2-202ENST00000381112 TSHZ2Q9NRE2 1034 aa24.55■■□□□ 1.52
CCM2-202ENST00000381112 C9orf78Q9NZ63 289 aaPredicted RBP24.55■■□□□ 1.52
CCM2-202ENST00000381112 GRM8O00222 908 aa24.54■■□□□ 1.52
CCM2-202ENST00000381112 HMMRO75330 724 aa24.54■■□□□ 1.52
CCM2-202ENST00000381112 ATP8B2P98198 1209 aa24.54■■□□□ 1.52
CCM2-202ENST00000381112 ITPK1Q13572 414 aa24.54■■□□□ 1.52
CCM2-202ENST00000381112 ZBTB1Q9Y2K1 713 aa24.54■■□□□ 1.52
CCM2-202ENST00000381112 CICQ96RK0 1608 aaPredicted RBP24.54■■□□□ 1.52
CCM2-202ENST00000381112 GCKRQ14397 625 aa24.53■■□□□ 1.52
CCM2-202ENST00000381112 FBXO41Q8TF61 875 aa24.53■■□□□ 1.52
CCM2-202ENST00000381112 NHSQ6T4R5 1651 aa24.53■■□□□ 1.52
CCM2-202ENST00000381112 ZBTB3Q9H5J0 574 aa24.52■■□□□ 1.52
CCM2-202ENST00000381112 ARFGEF2Q9Y6D5 1785 aa24.52■■□□□ 1.52
CCM2-202ENST00000381112 RBM6P78332 1123 aaKnown RBP24.51■■□□□ 1.51
CCM2-202ENST00000381112 INTS5Q6P9B9 1019 aaKnown RBP24.51■■□□□ 1.51
CCM2-202ENST00000381112 HDAC5Q9UQL6 1122 aa24.51■■□□□ 1.51
CCM2-202ENST00000381112 ZNF330Q9Y3S2 320 aaPredicted RBP24.51■■□□□ 1.51
CCM2-202ENST00000381112 PNMA6EA0A0J9YXQ4 647 aa24.51■■□□□ 1.51
CCM2-202ENST00000381112 IL6STP40189 918 aaPredicted RBP24.51■■□□□ 1.51
CCM2-202ENST00000381112 CHD1LQ86WJ1 897 aa24.5■■□□□ 1.51
CCM2-202ENST00000381112 CCDC87Q9NVE4 849 aa24.5■■□□□ 1.51
CCM2-202ENST00000381112 ATP5J2-PTCD1G3V325 749 aa24.49■■□□□ 1.51
CCM2-202ENST00000381112 CRKLP46109 303 aaKnown RBP24.49■■□□□ 1.51
CCM2-202ENST00000381112 KIF6Q6ZMV9 814 aa24.49■■□□□ 1.51
CCM2-202ENST00000381112 NUP188Q5SRE5 1749 aa24.49■■□□□ 1.51
CCM2-202ENST00000381112 ANKRD45Q5TZF3 282 aa24.49■■□□□ 1.51
CCM2-202ENST00000381112 ZNF831Q5JPB2 1677 aa24.48■■□□□ 1.51
CCM2-202ENST00000381112 PDE4AP27815 886 aa24.48■■□□□ 1.51
CCM2-202ENST00000381112 KRT27Q7Z3Y8 459 aa24.48■■□□□ 1.51
CCM2-202ENST00000381112 SSH3Q8TE77 659 aa24.48■■□□□ 1.51
CCM2-202ENST00000381112 PPP1R42Q7Z4L9 355 aa24.47■■□□□ 1.51
CCM2-202ENST00000381112 MAP3K15Q6ZN16 1313 aa24.47■■□□□ 1.51
CCM2-202ENST00000381112 EIF5P55010 431 aaKnown RBP24.47■■□□□ 1.51
CCM2-202ENST00000381112 MTX1Q13505 466 aa24.47■■□□□ 1.51
CCM2-202ENST00000381112 POLA2Q14181 598 aa24.47■■□□□ 1.51
CCM2-202ENST00000381112 KAZALD1Q96I82 304 aa24.47■■□□□ 1.51
CCM2-202ENST00000381112 LNPKQ9C0E8 428 aa24.47■■□□□ 1.51
CCM2-202ENST00000381112 SUCLG2Q96I99 432 aa24.46■■□□□ 1.51
CCM2-202ENST00000381112 BTAF1O14981 1849 aa24.46■■□□□ 1.51
CCM2-202ENST00000381112 FAM196AQ6ZSG2 479 aa24.45■■□□□ 1.51
CCM2-202ENST00000381112 ISCA1Q9BUE6 129 aa24.45■■□□□ 1.51
CCM2-202ENST00000381112 BCL11BQ9C0K0 894 aaPredicted RBP24.45■■□□□ 1.51
CCM2-202ENST00000381112 RREB1Q92766 1687 aa24.45■■□□□ 1.5
CCM2-202ENST00000381112 TCIRG1Q13488 830 aa24.45■■□□□ 1.5
CCM2-202ENST00000381112 CCDC191Q8NCU4 936 aa24.45■■□□□ 1.5
CCM2-202ENST00000381112 TRIM28Q13263 835 aaKnown RBP24.44■■□□□ 1.5
CCM2-202ENST00000381112 GIGYF2Q6Y7W6 1299 aaKnown RBP24.44■■□□□ 1.5
CCM2-202ENST00000381112 LINC00116Q8NCU8 138 aa24.44■■□□□ 1.5
CCM2-202ENST00000381112 CWC25Q9NXE8 425 aaPredicted RBP24.44■■□□□ 1.5
CCM2-202ENST00000381112 A0A087WZG4 1122 aa24.43■■□□□ 1.5
CCM2-202ENST00000381112 SRGAP3O43295 1099 aa24.43■■□□□ 1.5
CCM2-202ENST00000381112 COL15A1P39059 1388 aa24.43■■□□□ 1.5
CCM2-202ENST00000381112 CASP7P55210 303 aa24.43■■□□□ 1.5
CCM2-202ENST00000381112 NPM2Q86SE8 214 aaKnown RBP24.43■■□□□ 1.5
CCM2-202ENST00000381112 DZIP3Q86Y13 1208 aaKnown RBP24.43■■□□□ 1.5
CCM2-202ENST00000381112 ARXQ96QS3 562 aa24.43■■□□□ 1.5
CCM2-202ENST00000381112 ERVV-1B6SEH8 477 aa24.42■■□□□ 1.5
CCM2-202ENST00000381112 H7C1W4 665 aa24.42■■□□□ 1.5
CCM2-202ENST00000381112 BICC1Q9H694 974 aaKnown RBP24.42■■□□□ 1.5
CCM2-202ENST00000381112 SBF2Q86WG5 1849 aa24.42■■□□□ 1.5
CCM2-202ENST00000381112 KCNQ4P56696 695 aa24.41■■□□□ 1.5
CCM2-202ENST00000381112 HLFQ16534 295 aa24.41■■□□□ 1.5
CCM2-202ENST00000381112 UBE3BQ7Z3V4 1068 aa24.41■■□□□ 1.5
CCM2-202ENST00000381112 CNTNAP4Q9C0A0 1308 aa24.41■■□□□ 1.5
CCM2-202ENST00000381112 COL5A3P25940 1745 aaPredicted RBP24.41■■□□□ 1.5
CCM2-202ENST00000381112 TBC1D2BQ9UPU7 963 aa24.41■■□□□ 1.5
CCM2-202ENST00000381112 EXOC6BQ9Y2D4 811 aa24.41■■□□□ 1.5
CCM2-202ENST00000381112 RXRBP28702 533 aa24.4■■□□□ 1.5
CCM2-202ENST00000381112 JARID2Q92833 1246 aaPredicted RBP24.4■■□□□ 1.5
CCM2-202ENST00000381112 BRWD3Q6RI45 1802 aa24.39■■□□□ 1.5
CCM2-202ENST00000381112 HSP90AB3PQ58FF7 597 aa24.39■■□□□ 1.5
CCM2-202ENST00000381112 RGS17Q9UGC6 210 aaPredicted RBP24.39■■□□□ 1.5
CCM2-202ENST00000381112 CCNL1Q9UK58 526 aaPredicted RBP24.39■■□□□ 1.5
CCM2-202ENST00000381112 EPHA10Q5JZY3 1008 aa24.38■■□□□ 1.49
CCM2-202ENST00000381112 AFDNP55196 1824 aaKnown RBP24.38■■□□□ 1.49
CCM2-202ENST00000381112 RC3H1Q5TC82 1133 aaKnown RBP24.38■■□□□ 1.49
CCM2-202ENST00000381112 APBB1O00213 710 aa24.37■■□□□ 1.49
CCM2-202ENST00000381112 ZBTB47Q9UFB7 747 aaPredicted RBP24.37■■□□□ 1.49
CCM2-202ENST00000381112 MYH14Q7Z406 1995 aaKnown RBP24.37■■□□□ 1.49
CCM2-202ENST00000381112 BACH2Q9BYV9 841 aa24.36■■□□□ 1.49
CCM2-202ENST00000381112 SMARCA5O60264 1052 aaPredicted RBP24.36■■□□□ 1.49
CCM2-202ENST00000381112 RABL6Q3YEC7 729 aaPredicted RBP24.36■■□□□ 1.49
CCM2-202ENST00000381112 NOP58Q9Y2X3 529 aaKnown RBP24.36■■□□□ 1.49
CCM2-202ENST00000381112 SURF6O75683 361 aaKnown RBP24.35■■□□□ 1.49
CCM2-202ENST00000381112 CAMTA2O94983 1202 aa24.35■■□□□ 1.49
CCM2-202ENST00000381112 FAM161AQ3B820 660 aa24.35■■□□□ 1.49
CCM2-202ENST00000381112 RAB11FIP3O75154 756 aa24.34■■□□□ 1.49
CCM2-202ENST00000381112 NLRP10Q86W26 655 aa24.34■■□□□ 1.49
CCM2-202ENST00000381112 LRRCC1Q9C099 1032 aa24.34■■□□□ 1.49
CCM2-202ENST00000381112 LY75O60449 1722 aa24.34■■□□□ 1.49
CCM2-202ENST00000381112 TRIM37O94972 964 aa24.34■■□□□ 1.49
CCM2-202ENST00000381112 C8orf34Q49A92 452 aa24.33■■□□□ 1.49
CCM2-202ENST00000381112 C16orf71Q8IYS4 520 aaPredicted RBP24.33■■□□□ 1.49
CCM2-202ENST00000381112 ZNF34Q8IZ26 560 aa24.33■■□□□ 1.49
CCM2-202ENST00000381112 PCCAP05165 728 aaPredicted RBP24.32■■□□□ 1.48
CCM2-202ENST00000381112 GPTP24298 496 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms