RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 GLI3P10071 1580 aa17.45■□□□□ 0.38
CLCN4-201ENST00000380829 RBM42Q9BTD8 480 aaKnown RBP17.45■□□□□ 0.38
CLCN4-201ENST00000380829 ERVV-2B6SEH9 535 aa17.45■□□□□ 0.38
CLCN4-201ENST00000380829 NEXNQ0ZGT2 675 aa17.45■□□□□ 0.38
CLCN4-201ENST00000380829 MTX1Q13505 466 aa17.45■□□□□ 0.38
CLCN4-201ENST00000380829 ANKRD13DQ6ZTN6 518 aa17.45■□□□□ 0.38
CLCN4-201ENST00000380829 KIF1BPQ96EK5 621 aa17.45■□□□□ 0.38
CLCN4-201ENST00000380829 KAZALD1Q96I82 304 aa17.45■□□□□ 0.38
CLCN4-201ENST00000380829 SHANK3Q9BYB0 1731 aa17.44■□□□□ 0.38
CLCN4-201ENST00000380829 NEURL1BA8MQ27 555 aa17.44■□□□□ 0.38
CLCN4-201ENST00000380829 TRIM6-TRIM34B2RNG4 842 aa17.44■□□□□ 0.38
CLCN4-201ENST00000380829 OS9Q13438 667 aaPredicted RBP17.44■□□□□ 0.38
CLCN4-201ENST00000380829 NKX1-1Q15270 411 aaPredicted RBP17.44■□□□□ 0.38
CLCN4-201ENST00000380829 STAP2Q9UGK3 403 aa17.44■□□□□ 0.38
CLCN4-201ENST00000380829 PA2G4Q9UQ80 394 aaKnown RBP17.44■□□□□ 0.38
CLCN4-201ENST00000380829 PTCD1O75127 700 aaKnown RBP17.43■□□□□ 0.38
CLCN4-201ENST00000380829 ILDR1Q86SU0 546 aaPredicted RBP17.43■□□□□ 0.38
CLCN4-201ENST00000380829 RILPL2Q969X0 211 aa17.43■□□□□ 0.38
CLCN4-201ENST00000380829 METTL22Q9BUU2 404 aaPredicted RBP17.43■□□□□ 0.38
CLCN4-201ENST00000380829 USP26Q9BXU7 913 aa17.43■□□□□ 0.38
CLCN4-201ENST00000380829 BICC1Q9H694 974 aaKnown RBP17.43■□□□□ 0.38
CLCN4-201ENST00000380829 ROBO1Q9Y6N7 1651 aa17.43■□□□□ 0.38
CLCN4-201ENST00000380829 UTYO14607 1347 aa17.42■□□□□ 0.38
CLCN4-201ENST00000380829 ESPNB1AK53 854 aa17.42■□□□□ 0.38
CLCN4-201ENST00000380829 CD2BP2O95400 341 aaKnown RBP17.42■□□□□ 0.38
CLCN4-201ENST00000380829 MCM4P33991 863 aa17.42■□□□□ 0.38
CLCN4-201ENST00000380829 GCKRQ14397 625 aa17.42■□□□□ 0.38
CLCN4-201ENST00000380829 UNC5CLQ8IV45 518 aa17.42■□□□□ 0.38
CLCN4-201ENST00000380829 HSP90AB4PQ58FF6 505 aa17.41■□□□□ 0.38
CLCN4-201ENST00000380829 JARID2Q92833 1246 aaPredicted RBP17.41■□□□□ 0.38
CLCN4-201ENST00000380829 SNX21Q969T3 373 aa17.41■□□□□ 0.38
CLCN4-201ENST00000380829 HDAC5Q9UQL6 1122 aa17.41■□□□□ 0.38
CLCN4-201ENST00000380829 TUBGCP6Q96RT7 1819 aa17.41■□□□□ 0.38
CLCN4-201ENST00000380829 NBPF26B4DH59 902 aa17.41■□□□□ 0.38
CLCN4-201ENST00000380829 NBPF14Q5TI25 921 aa17.41■□□□□ 0.38
CLCN4-201ENST00000380829 NBPF10Q6P3W6 841 aaKnown RBP17.41■□□□□ 0.38
CLCN4-201ENST00000380829 NBPF15Q8N660 670 aa17.41■□□□□ 0.38
CLCN4-201ENST00000380829 ERC2O15083 957 aa17.4■□□□□ 0.38
CLCN4-201ENST00000380829 MAP4K4O95819 1239 aaPredicted RBP17.4■□□□□ 0.38
CLCN4-201ENST00000380829 LAMB4A4D0S4 1761 aa17.4■□□□□ 0.38
CLCN4-201ENST00000380829 KCPQ6ZWJ8 1503 aa17.4■□□□□ 0.38
CLCN4-201ENST00000380829 ATP5J2-PTCD1G3V325 749 aa17.4■□□□□ 0.38
CLCN4-201ENST00000380829 REC8O95072 547 aa17.39■□□□□ 0.37
CLCN4-201ENST00000380829 AOX1Q06278 1338 aa17.39■□□□□ 0.37
CLCN4-201ENST00000380829 A1BGP04217 495 aa17.39■□□□□ 0.37
CLCN4-201ENST00000380829 PI4K2BQ8TCG2 481 aa17.39■□□□□ 0.37
CLCN4-201ENST00000380829 TRAK2O60296 914 aa17.38■□□□□ 0.37
CLCN4-201ENST00000380829 MRE11P49959 708 aa17.38■□□□□ 0.37
CLCN4-201ENST00000380829 EPHA10Q5JZY3 1008 aa17.38■□□□□ 0.37
CLCN4-201ENST00000380829 GRPEL1Q9HAV7 217 aa17.38■□□□□ 0.37
CLCN4-201ENST00000380829 TMOD3Q9NYL9 352 aa17.38■□□□□ 0.37
CLCN4-201ENST00000380829 UBR2Q8IWV8 1755 aa17.38■□□□□ 0.37
CLCN4-201ENST00000380829 TOGARAM1Q9Y4F4 1720 aa17.38■□□□□ 0.37
CLCN4-201ENST00000380829 KLHDC4Q8TBB5 520 aa17.38■□□□□ 0.37
CLCN4-201ENST00000380829 CHMLP26374 656 aa17.37■□□□□ 0.37
CLCN4-201ENST00000380829 TTLL7Q6ZT98 887 aa17.37■□□□□ 0.37
CLCN4-201ENST00000380829 PLBD2Q8NHP8 589 aa17.37■□□□□ 0.37
CLCN4-201ENST00000380829 PAPPAQ13219 1627 aa17.37■□□□□ 0.37
CLCN4-201ENST00000380829 UBE3BQ7Z3V4 1068 aa17.37■□□□□ 0.37
CLCN4-201ENST00000380829 CLASRPQ8N2M8 674 aaKnown RBP17.37■□□□□ 0.37
CLCN4-201ENST00000380829 ESYT1Q9BSJ8 1104 aa17.37■□□□□ 0.37
CLCN4-201ENST00000380829 SIL1Q9H173 461 aa17.37■□□□□ 0.37
CLCN4-201ENST00000380829 ARFGEF2Q9Y6D5 1785 aa17.37■□□□□ 0.37
CLCN4-201ENST00000380829 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.36■□□□□ 0.37
CLCN4-201ENST00000380829 AHDC1Q5TGY3 1603 aaPredicted RBP17.36■□□□□ 0.37
CLCN4-201ENST00000380829 TNS2Q63HR2 1409 aa17.35■□□□□ 0.37
CLCN4-201ENST00000380829 COL14A1Q05707 1796 aaKnown RBP17.35■□□□□ 0.37
CLCN4-201ENST00000380829 ERC1Q8IUD2 1116 aa17.35■□□□□ 0.37
CLCN4-201ENST00000380829 ASAP1Q9ULH1 1129 aa17.35■□□□□ 0.37
CLCN4-201ENST00000380829 AFDNP55196 1824 aaKnown RBP17.35■□□□□ 0.37
CLCN4-201ENST00000380829 A0A087WZG4 1122 aa17.35■□□□□ 0.37
CLCN4-201ENST00000380829 G3BP1Q13283 466 aaKnown RBP eCLIP17.35■□□□□ 0.37
CLCN4-201ENST00000380829 RABEP1Q15276 862 aa17.35■□□□□ 0.37
CLCN4-201ENST00000380829 PIGBQ92521 554 aa17.35■□□□□ 0.37
CLCN4-201ENST00000380829 COL16A1Q07092 1604 aaPredicted RBP17.34■□□□□ 0.37
CLCN4-201ENST00000380829 K7ELQ4 463 aaPredicted RBP17.34■□□□□ 0.37
CLCN4-201ENST00000380829 SASH1O94885 1247 aa17.34■□□□□ 0.37
CLCN4-201ENST00000380829 FOXD4L1Q9NU39 408 aa17.34■□□□□ 0.37
CLCN4-201ENST00000380829 ADAMTS2O95450 1211 aa17.33■□□□□ 0.37
CLCN4-201ENST00000380829 IFIT2P09913 472 aaKnown RBP17.33■□□□□ 0.37
CLCN4-201ENST00000380829 AACSQ86V21 672 aa17.33■□□□□ 0.37
CLCN4-201ENST00000380829 IL25Q9H293 177 aa17.33■□□□□ 0.37
CLCN4-201ENST00000380829 PDCL3Q9H2J4 239 aa17.33■□□□□ 0.37
CLCN4-201ENST00000380829 ZBTB3Q9H5J0 574 aa17.33■□□□□ 0.37
CLCN4-201ENST00000380829 ANO2Q9NQ90 1003 aa17.33■□□□□ 0.37
CLCN4-201ENST00000380829 LTBP4Q8N2S1 1624 aa17.33■□□□□ 0.36
CLCN4-201ENST00000380829 TRIM44Q96DX7 344 aaPredicted RBP17.33■□□□□ 0.36
CLCN4-201ENST00000380829 ZNF330Q9Y3S2 320 aaPredicted RBP17.33■□□□□ 0.36
CLCN4-201ENST00000380829 DISP2A7MBM2 1401 aa17.33■□□□□ 0.36
CLCN4-201ENST00000380829 A0A0U1RQG5 324 aaPredicted RBP17.32■□□□□ 0.36
CLCN4-201ENST00000380829 CHMP5Q9NZZ3 219 aa17.32■□□□□ 0.36
CLCN4-201ENST00000380829 TPM2P07951 284 aa17.32■□□□□ 0.36
CLCN4-201ENST00000380829 TTC41PQ6P2S7 1318 aa17.32■□□□□ 0.36
CLCN4-201ENST00000380829 USP42Q9H9J4 1324 aaKnown RBP17.32■□□□□ 0.36
CLCN4-201ENST00000380829 COL22A1Q8NFW1 1626 aaPredicted RBP17.32■□□□□ 0.36
CLCN4-201ENST00000380829 KIAA1211Q6ZU35 1233 aa17.31■□□□□ 0.36
CLCN4-201ENST00000380829 GLRX3O76003 335 aaKnown RBP17.31■□□□□ 0.36
CLCN4-201ENST00000380829 CNTROBQ8N137 903 aa17.31■□□□□ 0.36
CLCN4-201ENST00000380829 EAF2Q96CJ1 260 aaPredicted RBP17.31■□□□□ 0.36
CLCN4-201ENST00000380829 CCDC8Q9H0W5 538 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms