RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 ECHDC1Q9NTX5 307 aa13.16□□□□□ -0.3
DNMT3A-203ENST00000380746 CNPY2Q9Y2B0 182 aa13.16□□□□□ -0.3
DNMT3A-203ENST00000380746 GRM8O00222 908 aa13.16□□□□□ -0.3
DNMT3A-203ENST00000380746 GADD45BO75293 160 aaPredicted RBP13.16□□□□□ -0.3
DNMT3A-203ENST00000380746 GLRX3O76003 335 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-203ENST00000380746 PTH1RQ03431 593 aa13.16□□□□□ -0.3
DNMT3A-203ENST00000380746 KSR2Q6VAB6 950 aa13.16□□□□□ -0.3
DNMT3A-203ENST00000380746 CCDC129Q6ZRS4 1044 aa13.16□□□□□ -0.3
DNMT3A-203ENST00000380746 TFIP11Q9UBB9 837 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-203ENST00000380746 CEP170BQ9Y4F5 1589 aaPredicted RBP13.15□□□□□ -0.3
DNMT3A-203ENST00000380746 ATP10DQ9P241 1426 aa13.15□□□□□ -0.3
DNMT3A-203ENST00000380746 SLFNL1Q499Z3 407 aa13.15□□□□□ -0.3
DNMT3A-203ENST00000380746 HSP90AB3PQ58FF7 597 aa13.15□□□□□ -0.3
DNMT3A-203ENST00000380746 CWC22Q9HCG8 908 aaKnown RBP13.15□□□□□ -0.3
DNMT3A-203ENST00000380746 AK9Q5TCS8 1911 aa13.15□□□□□ -0.3
DNMT3A-203ENST00000380746 RAB11FIP3O75154 756 aa13.15□□□□□ -0.3
DNMT3A-203ENST00000380746 GIGYF1O75420 1035 aaPredicted RBP13.15□□□□□ -0.3
DNMT3A-203ENST00000380746 CAMK4Q16566 473 aa13.15□□□□□ -0.3
DNMT3A-203ENST00000380746 AMOTQ4VCS5 1084 aa13.15□□□□□ -0.3
DNMT3A-203ENST00000380746 OVOS2A0A0J9YW53 1432 aa13.15□□□□□ -0.3
DNMT3A-203ENST00000380746 OVOS2Q6IE36 1432 aa13.15□□□□□ -0.3
DNMT3A-203ENST00000380746 FKBP4Q02790 459 aaKnown RBP eCLIP13.15□□□□□ -0.3
DNMT3A-203ENST00000380746 CYP46A1Q9Y6A2 500 aa13.14□□□□□ -0.31
DNMT3A-203ENST00000380746 KLHL40Q2TBA0 621 aa13.14□□□□□ -0.31
DNMT3A-203ENST00000380746 ANKRD13DQ6ZTN6 518 aa13.14□□□□□ -0.31
DNMT3A-203ENST00000380746 CHST3Q7LGC8 479 aa13.14□□□□□ -0.31
DNMT3A-203ENST00000380746 RBSNQ9H1K0 784 aa13.14□□□□□ -0.31
DNMT3A-203ENST00000380746 HTATSF1O43719 755 aaKnown RBP13.14□□□□□ -0.31
DNMT3A-203ENST00000380746 NMIQ13287 307 aaPredicted RBP13.14□□□□□ -0.31
DNMT3A-203ENST00000380746 ADCK5Q3MIX3 580 aa13.14□□□□□ -0.31
DNMT3A-203ENST00000380746 ZNF830Q96NB3 372 aaPredicted RBP13.14□□□□□ -0.31
DNMT3A-203ENST00000380746 TULP1O00294 542 aaPredicted RBP13.13□□□□□ -0.31
DNMT3A-203ENST00000380746 GPTP24298 496 aa13.13□□□□□ -0.31
DNMT3A-203ENST00000380746 ZNF790Q6PG37 636 aa13.13□□□□□ -0.31
DNMT3A-203ENST00000380746 SSH3Q8TE77 659 aa13.13□□□□□ -0.31
DNMT3A-203ENST00000380746 EAF2Q96CJ1 260 aaPredicted RBP13.13□□□□□ -0.31
DNMT3A-203ENST00000380746 LMBRD1Q9NUN5 540 aa13.13□□□□□ -0.31
DNMT3A-203ENST00000380746 DLC1Q96QB1 1528 aa13.13□□□□□ -0.31
DNMT3A-203ENST00000380746 GUCY1B3Q02153 619 aa13.13□□□□□ -0.31
DNMT3A-203ENST00000380746 WASHC4Q2M389 1173 aa13.13□□□□□ -0.31
DNMT3A-203ENST00000380746 ZNF594Q96JF6 807 aaPredicted RBP13.13□□□□□ -0.31
DNMT3A-203ENST00000380746 CDC42BPGQ6DT37 1551 aa13.13□□□□□ -0.31
DNMT3A-203ENST00000380746 A1BGP04217 495 aa13.12□□□□□ -0.31
DNMT3A-203ENST00000380746 PTMSP20962 102 aa13.12□□□□□ -0.31
DNMT3A-203ENST00000380746 USP48Q86UV5 1035 aa13.12□□□□□ -0.31
DNMT3A-203ENST00000380746 GPT2Q8TD30 523 aa13.12□□□□□ -0.31
DNMT3A-203ENST00000380746 TMEM63CQ9P1W3 806 aa13.12□□□□□ -0.31
DNMT3A-203ENST00000380746 SNX14Q9Y5W7 946 aa13.12□□□□□ -0.31
DNMT3A-203ENST00000380746 IBTKQ9P2D0 1353 aaPredicted RBP13.12□□□□□ -0.31
DNMT3A-203ENST00000380746 TIMM10P62072 90 aa13.12□□□□□ -0.31
DNMT3A-203ENST00000380746 LARP1BQ659C4 914 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-203ENST00000380746 LMBR1LQ6UX01 489 aa13.12□□□□□ -0.31
DNMT3A-203ENST00000380746 DRC7Q8IY82 874 aa13.12□□□□□ -0.31
DNMT3A-203ENST00000380746 SEC62Q99442 399 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-203ENST00000380746 RBM8AQ9Y5S9 174 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-203ENST00000380746 GJB2P29033 226 aa13.12□□□□□ -0.31
DNMT3A-203ENST00000380746 SPC24Q8NBT2 197 aa13.12□□□□□ -0.31
DNMT3A-203ENST00000380746 R3HCC1Q9Y3T6 440 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-203ENST00000380746 H3BQV1 296 aa13.11□□□□□ -0.31
DNMT3A-203ENST00000380746 IFFO2Q5TF58 517 aa13.11□□□□□ -0.31
DNMT3A-203ENST00000380746 LARP1Q6PKG0 1096 aaKnown RBP13.11□□□□□ -0.31
DNMT3A-203ENST00000380746 ARHGEF25Q86VW2 580 aa13.11□□□□□ -0.31
DNMT3A-203ENST00000380746 HYPKQ9NX55 129 aa13.11□□□□□ -0.31
DNMT3A-203ENST00000380746 ZDHHC9Q9Y397 364 aa13.11□□□□□ -0.31
DNMT3A-203ENST00000380746 TFCP2Q12800 502 aa13.11□□□□□ -0.31
DNMT3A-203ENST00000380746 CHMP4AQ9BY43 222 aa13.11□□□□□ -0.31
DNMT3A-203ENST00000380746 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.11□□□□□ -0.31
DNMT3A-203ENST00000380746 GOLIM4O00461 696 aa13.11□□□□□ -0.31
DNMT3A-203ENST00000380746 LARGE1O95461 756 aa13.11□□□□□ -0.31
DNMT3A-203ENST00000380746 SGSM2O43147 1006 aa13.1□□□□□ -0.31
DNMT3A-203ENST00000380746 DNM1Q05193 864 aaKnown RBP13.1□□□□□ -0.31
DNMT3A-203ENST00000380746 EPHA10Q5JZY3 1008 aa13.1□□□□□ -0.31
DNMT3A-203ENST00000380746 GIMAP6Q6P9H5 292 aa13.1□□□□□ -0.31
DNMT3A-203ENST00000380746 BLOC1S2Q6QNY1 142 aa13.1□□□□□ -0.31
DNMT3A-203ENST00000380746 FAM184AQ8NB25 1140 aa13.1□□□□□ -0.31
DNMT3A-203ENST00000380746 CHMP4CQ96CF2 233 aa13.1□□□□□ -0.31
DNMT3A-203ENST00000380746 APPP05067 770 aa13.1□□□□□ -0.31
DNMT3A-203ENST00000380746 HAND2P61296 217 aa13.1□□□□□ -0.31
DNMT3A-203ENST00000380746 LINS1Q8NG48 757 aa13.1□□□□□ -0.31
DNMT3A-203ENST00000380746 SYAP1Q96A49 352 aaPredicted RBP13.1□□□□□ -0.31
DNMT3A-203ENST00000380746 TOMM22Q9NS69 142 aa13.1□□□□□ -0.31
DNMT3A-203ENST00000380746 LIMCH1Q9UPQ0 1083 aa13.1□□□□□ -0.31
DNMT3A-203ENST00000380746 RGS12O14924 1447 aa13.1□□□□□ -0.31
DNMT3A-203ENST00000380746 CCT2P78371 535 aaKnown RBP13.1□□□□□ -0.31
DNMT3A-203ENST00000380746 IFNL2Q8IZJ0 200 aa13.1□□□□□ -0.31
DNMT3A-203ENST00000380746 RIMS1Q86UR5 1692 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-203ENST00000380746 USP31Q70CQ4 1352 aa13.09□□□□□ -0.31
DNMT3A-203ENST00000380746 WDR33Q9C0J8 1336 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-203ENST00000380746 FSD2A1L4K1 749 aa13.09□□□□□ -0.31
DNMT3A-203ENST00000380746 MCM2P49736 904 aa13.09□□□□□ -0.31
DNMT3A-203ENST00000380746 BICD2Q8TD16 824 aa13.09□□□□□ -0.31
DNMT3A-203ENST00000380746 HDAC5Q9UQL6 1122 aa13.09□□□□□ -0.31
DNMT3A-203ENST00000380746 USP32Q8NFA0 1604 aa13.09□□□□□ -0.31
DNMT3A-203ENST00000380746 SPATA31D1Q6ZQQ2 1576 aa13.09□□□□□ -0.31
DNMT3A-203ENST00000380746 DBNDD2Q9BQY9 259 aa13.09□□□□□ -0.31
DNMT3A-203ENST00000380746 USP25Q9UHP3 1055 aa13.09□□□□□ -0.31
DNMT3A-203ENST00000380746 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.09□□□□□ -0.31
DNMT3A-203ENST00000380746 STX6O43752 255 aa13.09□□□□□ -0.31
DNMT3A-203ENST00000380746 HCLS1P14317 486 aaPredicted RBP13.09□□□□□ -0.31
DNMT3A-203ENST00000380746 CKAP2LQ8IYA6 745 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms