RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 CCDC112Q8NEF3 446 aa8.92□□□□□ -0.98
CDKL5-201ENST00000379989 DMRT2Q9Y5R5 561 aa8.92□□□□□ -0.98
CDKL5-201ENST00000379989 DCCP43146 1447 aa8.92□□□□□ -0.98
CDKL5-201ENST00000379989 ZNF853P0CG23 659 aa8.92□□□□□ -0.98
CDKL5-201ENST00000379989 LTKP29376 864 aa8.92□□□□□ -0.98
CDKL5-201ENST00000379989 CCDC91Q7Z6B0 441 aa8.92□□□□□ -0.98
CDKL5-201ENST00000379989 GOLGA6L1Q8N7Z2 621 aa8.92□□□□□ -0.98
CDKL5-201ENST00000379989 C16orf45Q96MC5 204 aaPredicted RBP8.92□□□□□ -0.98
CDKL5-201ENST00000379989 BABAM1Q9NWV8 329 aa8.92□□□□□ -0.98
CDKL5-201ENST00000379989 RRP15Q9Y3B9 282 aaKnown RBP8.92□□□□□ -0.98
CDKL5-201ENST00000379989 HTATSF1O43719 755 aaKnown RBP8.91□□□□□ -0.98
CDKL5-201ENST00000379989 ZSCAN26Q16670 478 aa8.91□□□□□ -0.98
CDKL5-201ENST00000379989 TTC31Q49AM3 519 aaPredicted RBP8.91□□□□□ -0.98
CDKL5-201ENST00000379989 ARHGAP45Q92619 1136 aa8.91□□□□□ -0.98
CDKL5-201ENST00000379989 PTPRCP08575 1304 aa8.91□□□□□ -0.98
CDKL5-201ENST00000379989 ADGRL3Q9HAR2 1447 aa8.91□□□□□ -0.98
CDKL5-201ENST00000379989 WAPLQ7Z5K2 1190 aa8.91□□□□□ -0.98
CDKL5-201ENST00000379989 MNS1Q8NEH6 495 aa8.91□□□□□ -0.98
CDKL5-201ENST00000379989 RTF1Q92541 710 aaKnown RBP8.91□□□□□ -0.98
CDKL5-201ENST00000379989 LRRFIP2Q9Y608 721 aaKnown RBP8.91□□□□□ -0.98
CDKL5-201ENST00000379989 SBNO1A3KN83 1393 aa8.91□□□□□ -0.98
CDKL5-201ENST00000379989 NFE2L2Q16236 605 aa8.9□□□□□ -0.98
CDKL5-201ENST00000379989 SLFNL1Q499Z3 407 aa8.9□□□□□ -0.98
CDKL5-201ENST00000379989 GGNBP2Q9H3C7 697 aa8.9□□□□□ -0.98
CDKL5-201ENST00000379989 DEF6Q9H4E7 631 aa8.9□□□□□ -0.98
CDKL5-201ENST00000379989 IFT57Q9NWB7 429 aa8.9□□□□□ -0.98
CDKL5-201ENST00000379989 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.9□□□□□ -0.98
CDKL5-201ENST00000379989 AMOTL2Q9Y2J4 779 aa8.9□□□□□ -0.98
CDKL5-201ENST00000379989 V9GYY5 206 aaPredicted RBP8.9□□□□□ -0.98
CDKL5-201ENST00000379989 GNAI1P63096 354 aa8.9□□□□□ -0.98
CDKL5-201ENST00000379989 PAXBP1Q9Y5B6 917 aa8.9□□□□□ -0.98
CDKL5-201ENST00000379989 FHOD1Q9Y613 1164 aa8.9□□□□□ -0.98
CDKL5-201ENST00000379989 IL13P35225 146 aa8.9□□□□□ -0.99
CDKL5-201ENST00000379989 ST5P78524 1137 aa8.9□□□□□ -0.99
CDKL5-201ENST00000379989 XIRP1Q702N8 1843 aaKnown RBP8.9□□□□□ -0.99
CDKL5-201ENST00000379989 AP5Z1O43299 807 aa8.89□□□□□ -0.99
CDKL5-201ENST00000379989 KDM4AO75164 1064 aa8.89□□□□□ -0.99
CDKL5-201ENST00000379989 PLA2G4AP47712 749 aa8.89□□□□□ -0.99
CDKL5-201ENST00000379989 ELF2Q15723 593 aa8.89□□□□□ -0.99
CDKL5-201ENST00000379989 SWT1Q5T5J6 900 aaKnown RBP8.89□□□□□ -0.99
CDKL5-201ENST00000379989 SMARCE1Q969G3 411 aa8.89□□□□□ -0.99
CDKL5-201ENST00000379989 ZNF215Q9UL58 517 aaPredicted RBP8.89□□□□□ -0.99
CDKL5-201ENST00000379989 ERBB3P21860 1342 aa8.89□□□□□ -0.99
CDKL5-201ENST00000379989 FLT4P35916 1363 aa8.89□□□□□ -0.99
CDKL5-201ENST00000379989 STRCP1A6NGW2 1772 aa8.89□□□□□ -0.99
CDKL5-201ENST00000379989 RARSP54136 660 aaKnown RBP8.89□□□□□ -0.99
CDKL5-201ENST00000379989 NPHP4O75161 1426 aaPredicted RBP8.89□□□□□ -0.99
CDKL5-201ENST00000379989 TPM3P06753 285 aa8.89□□□□□ -0.99
CDKL5-201ENST00000379989 SAFB2Q14151 953 aaKnown RBP eCLIP8.88□□□□□ -0.99
CDKL5-201ENST00000379989 TEX35Q5T0J7 233 aa8.88□□□□□ -0.99
CDKL5-201ENST00000379989 ZNF592Q92610 1267 aa8.88□□□□□ -0.99
CDKL5-201ENST00000379989 CWC15Q9P013 229 aaKnown RBP8.88□□□□□ -0.99
CDKL5-201ENST00000379989 EXOC6BQ9Y2D4 811 aa8.88□□□□□ -0.99
CDKL5-201ENST00000379989 KDRP35968 1356 aa8.88□□□□□ -0.99
CDKL5-201ENST00000379989 KIAA0232Q92628 1395 aa8.88□□□□□ -0.99
CDKL5-201ENST00000379989 ACEP12821 1306 aa8.88□□□□□ -0.99
CDKL5-201ENST00000379989 PRR36Q9H6K5 1346 aa8.88□□□□□ -0.99
CDKL5-201ENST00000379989 CLSTN1O94985 981 aa8.88□□□□□ -0.99
CDKL5-201ENST00000379989 LRCH2Q5VUJ6 765 aa8.88□□□□□ -0.99
CDKL5-201ENST00000379989 SUGP1Q8IWZ8 645 aaKnown RBP8.88□□□□□ -0.99
CDKL5-201ENST00000379989 CCDC146Q8IYE0 955 aa8.88□□□□□ -0.99
CDKL5-201ENST00000379989 ZGPATQ8N5A5 531 aaKnown RBP8.88□□□□□ -0.99
CDKL5-201ENST00000379989 SPC24Q8NBT2 197 aa8.88□□□□□ -0.99
CDKL5-201ENST00000379989 BORCS6Q96GS4 357 aa8.88□□□□□ -0.99
CDKL5-201ENST00000379989 PPP1R12AO14974 1030 aaPredicted RBP8.88□□□□□ -0.99
CDKL5-201ENST00000379989 HCLS1P14317 486 aaPredicted RBP8.88□□□□□ -0.99
CDKL5-201ENST00000379989 ATP6V1AP38606 617 aa8.88□□□□□ -0.99
CDKL5-201ENST00000379989 SYAP1Q96A49 352 aaPredicted RBP8.88□□□□□ -0.99
CDKL5-201ENST00000379989 CALR3Q96L12 384 aaKnown RBP8.88□□□□□ -0.99
CDKL5-201ENST00000379989 MAGEA9P43362 315 aa8.87□□□□□ -0.99
CDKL5-201ENST00000379989 ZKSCAN2Q63HK3 967 aa8.87□□□□□ -0.99
CDKL5-201ENST00000379989 FBXO18Q8NFZ0 1043 aa8.87□□□□□ -0.99
CDKL5-201ENST00000379989 PIK3C2AO00443 1686 aa8.87□□□□□ -0.99
CDKL5-201ENST00000379989 POLR3GO15318 223 aaPredicted RBP8.87□□□□□ -0.99
CDKL5-201ENST00000379989 PNMA6AP0CW24 399 aaPredicted RBP8.87□□□□□ -0.99
CDKL5-201ENST00000379989 MCTP2Q6DN12 878 aa8.87□□□□□ -0.99
CDKL5-201ENST00000379989 NBPF10Q6P3W6 841 aaKnown RBP8.87□□□□□ -0.99
CDKL5-201ENST00000379989 CWC22Q9HCG8 908 aaKnown RBP8.87□□□□□ -0.99
CDKL5-201ENST00000379989 OS9Q13438 667 aaPredicted RBP8.86□□□□□ -0.99
CDKL5-201ENST00000379989 PPP2R5AQ15172 486 aa8.86□□□□□ -0.99
CDKL5-201ENST00000379989 NBPF11Q86T75 865 aa8.86□□□□□ -0.99
CDKL5-201ENST00000379989 H2AFXP16104 143 aaPredicted RBP8.86□□□□□ -0.99
CDKL5-201ENST00000379989 KCNA6P17658 529 aa8.86□□□□□ -0.99
CDKL5-201ENST00000379989 PTGS1P23219 599 aa8.86□□□□□ -0.99
CDKL5-201ENST00000379989 MAP2K2P36507 400 aa8.86□□□□□ -0.99
CDKL5-201ENST00000379989 PLCB2Q00722 1185 aa8.86□□□□□ -0.99
CDKL5-201ENST00000379989 BIRC2Q13490 618 aa8.86□□□□□ -0.99
CDKL5-201ENST00000379989 NBPF9Q3BBW0 867 aa8.86□□□□□ -0.99
CDKL5-201ENST00000379989 CFAP44Q96MT7 982 aa8.86□□□□□ -0.99
CDKL5-201ENST00000379989 DDX19BQ9UMR2 479 aa8.86□□□□□ -0.99
CDKL5-201ENST00000379989 TRIM35Q9UPQ4 493 aa8.86□□□□□ -0.99
CDKL5-201ENST00000379989 OVOS2A0A0G2JMS6 1433 aa8.86□□□□□ -0.99
CDKL5-201ENST00000379989 CACNA1FO60840 1977 aa8.86□□□□□ -0.99
CDKL5-201ENST00000379989 U2SURPO15042 1029 aaKnown RBP8.86□□□□□ -0.99
CDKL5-201ENST00000379989 MAP9Q49MG5 647 aa8.86□□□□□ -0.99
CDKL5-201ENST00000379989 NOM1Q5C9Z4 860 aaKnown RBP8.86□□□□□ -0.99
CDKL5-201ENST00000379989 GOLGA5Q8TBA6 731 aa8.86□□□□□ -0.99
CDKL5-201ENST00000379989 FOXD4L5Q5VV16 416 aaPredicted RBP8.85□□□□□ -0.99
CDKL5-201ENST00000379989 ANKRD20A12PQ8NF67 263 aa8.85□□□□□ -0.99
CDKL5-201ENST00000379989 FOXD4L4Q8WXT5 416 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms