RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 RABEP1Q15276 862 aa18.18■□□□□ 0.5
PRNP-201ENST00000379440 LRP10Q7Z4F1 713 aa18.18■□□□□ 0.5
PRNP-201ENST00000379440 COL5A2P05997 1499 aaPredicted RBP18.18■□□□□ 0.5
PRNP-201ENST00000379440 LARP1Q6PKG0 1096 aaKnown RBP18.17■□□□□ 0.5
PRNP-201ENST00000379440 ESYT1Q9BSJ8 1104 aa18.17■□□□□ 0.5
PRNP-201ENST00000379440 PLEKHG2Q9H7P9 1386 aa18.17■□□□□ 0.5
PRNP-201ENST00000379440 PI4K2BQ8TCG2 481 aa18.17■□□□□ 0.5
PRNP-201ENST00000379440 MYD88Q99836 296 aa18.17■□□□□ 0.5
PRNP-201ENST00000379440 BICC1Q9H694 974 aaKnown RBP18.17■□□□□ 0.5
PRNP-201ENST00000379440 HSP90AA1P07900 732 aaKnown RBP18.16■□□□□ 0.5
PRNP-201ENST00000379440 HSP90AB4PQ58FF6 505 aa18.16■□□□□ 0.5
PRNP-201ENST00000379440 UTYO14607 1347 aa18.16■□□□□ 0.5
PRNP-201ENST00000379440 AOX1Q06278 1338 aa18.16■□□□□ 0.5
PRNP-201ENST00000379440 NEURL1BA8MQ27 555 aa18.16■□□□□ 0.5
PRNP-201ENST00000379440 ANKRD13DQ6ZTN6 518 aa18.16■□□□□ 0.5
PRNP-201ENST00000379440 DDX54Q8TDD1 881 aaKnown RBP18.16■□□□□ 0.5
PRNP-201ENST00000379440 PCDH11XQ9BZA7 1347 aa18.15■□□□□ 0.5
PRNP-201ENST00000379440 PCDH11YQ9BZA8 1340 aa18.15■□□□□ 0.5
PRNP-201ENST00000379440 NEXNQ0ZGT2 675 aa18.15■□□□□ 0.5
PRNP-201ENST00000379440 JARID2Q92833 1246 aaPredicted RBP18.15■□□□□ 0.5
PRNP-201ENST00000379440 METTL22Q9BUU2 404 aaPredicted RBP18.15■□□□□ 0.5
PRNP-201ENST00000379440 EVA1CP58658 441 aa18.15■□□□□ 0.5
PRNP-201ENST00000379440 IL2RBP14784 551 aa18.14■□□□□ 0.49
PRNP-201ENST00000379440 CARD10Q9BWT7 1032 aa18.14■□□□□ 0.49
PRNP-201ENST00000379440 GCKRQ14397 625 aa18.14■□□□□ 0.49
PRNP-201ENST00000379440 IL25Q9H293 177 aa18.14■□□□□ 0.49
PRNP-201ENST00000379440 HDAC5Q9UQL6 1122 aa18.14■□□□□ 0.49
PRNP-201ENST00000379440 MCM4P33991 863 aa18.13■□□□□ 0.49
PRNP-201ENST00000379440 FAM43AQ8N2R8 423 aa18.13■□□□□ 0.49
PRNP-201ENST00000379440 ANO2Q9NQ90 1003 aa18.13■□□□□ 0.49
PRNP-201ENST00000379440 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.13■□□□□ 0.49
PRNP-201ENST00000379440 CLASRPQ8N2M8 674 aaKnown RBP18.12■□□□□ 0.49
PRNP-201ENST00000379440 PARP4Q9UKK3 1724 aaKnown RBP18.12■□□□□ 0.49
PRNP-201ENST00000379440 EPHA10Q5JZY3 1008 aa18.12■□□□□ 0.49
PRNP-201ENST00000379440 KLHDC4Q8TBB5 520 aa18.11■□□□□ 0.49
PRNP-201ENST00000379440 ABCA3Q99758 1704 aa18.11■□□□□ 0.49
PRNP-201ENST00000379440 ATP5J2-PTCD1G3V325 749 aa18.11■□□□□ 0.49
PRNP-201ENST00000379440 PTCD1O75127 700 aaKnown RBP18.11■□□□□ 0.49
PRNP-201ENST00000379440 NBPF26B4DH59 902 aa18.1■□□□□ 0.49
PRNP-201ENST00000379440 ERVV-2B6SEH9 535 aa18.1■□□□□ 0.49
PRNP-201ENST00000379440 HSP90AA2PQ14568 343 aaPredicted RBP18.1■□□□□ 0.49
PRNP-201ENST00000379440 NBPF14Q5TI25 921 aa18.1■□□□□ 0.49
PRNP-201ENST00000379440 NBPF10Q6P3W6 841 aaKnown RBP18.1■□□□□ 0.49
PRNP-201ENST00000379440 NBPF15Q8N660 670 aa18.1■□□□□ 0.49
PRNP-201ENST00000379440 SIL1Q9H173 461 aa18.1■□□□□ 0.49
PRNP-201ENST00000379440 PALD1Q9ULE6 856 aa18.1■□□□□ 0.49
PRNP-201ENST00000379440 GLI3P10071 1580 aa18.1■□□□□ 0.49
PRNP-201ENST00000379440 SASH1O94885 1247 aa18.1■□□□□ 0.49
PRNP-201ENST00000379440 NKX1-1Q15270 411 aaPredicted RBP18.09■□□□□ 0.49
PRNP-201ENST00000379440 TNPO1Q92973 898 aaKnown RBP18.09■□□□□ 0.49
PRNP-201ENST00000379440 CIZ1Q9ULV3 898 aaPredicted RBP18.09■□□□□ 0.49
PRNP-201ENST00000379440 G3BP1Q13283 466 aaKnown RBP eCLIP18.09■□□□□ 0.49
PRNP-201ENST00000379440 ERC1Q8IUD2 1116 aa18.09■□□□□ 0.49
PRNP-201ENST00000379440 ST18O60284 1047 aa18.08■□□□□ 0.49
PRNP-201ENST00000379440 AACSQ86V21 672 aa18.08■□□□□ 0.49
PRNP-201ENST00000379440 USP42Q9H9J4 1324 aaKnown RBP18.08■□□□□ 0.48
PRNP-201ENST00000379440 A1BGP04217 495 aa18.08■□□□□ 0.48
PRNP-201ENST00000379440 IFIT2P09913 472 aaKnown RBP18.08■□□□□ 0.48
PRNP-201ENST00000379440 CNTROBQ8N137 903 aa18.08■□□□□ 0.48
PRNP-201ENST00000379440 TTC41PQ6P2S7 1318 aa18.08■□□□□ 0.48
PRNP-201ENST00000379440 RRP9O43818 475 aaKnown RBP18.07■□□□□ 0.48
PRNP-201ENST00000379440 RAB3GAP1Q15042 981 aa18.07■□□□□ 0.48
PRNP-201ENST00000379440 GLRX3O76003 335 aaKnown RBP18.07■□□□□ 0.48
PRNP-201ENST00000379440 UBE3BQ7Z3V4 1068 aa18.07■□□□□ 0.48
PRNP-201ENST00000379440 EAF2Q96CJ1 260 aaPredicted RBP18.07■□□□□ 0.48
PRNP-201ENST00000379440 ECHDC1Q9NTX5 307 aa18.07■□□□□ 0.48
PRNP-201ENST00000379440 BTG4Q9NY30 223 aa18.07■□□□□ 0.48
PRNP-201ENST00000379440 NHSL1Q5SYE7 1610 aa18.07■□□□□ 0.48
PRNP-201ENST00000379440 NEK4P51957 841 aa18.06■□□□□ 0.48
PRNP-201ENST00000379440 TTLL7Q6ZT98 887 aa18.06■□□□□ 0.48
PRNP-201ENST00000379440 PLBD2Q8NHP8 589 aa18.06■□□□□ 0.48
PRNP-201ENST00000379440 CCDC8Q9H0W5 538 aaPredicted RBP18.06■□□□□ 0.48
PRNP-201ENST00000379440 A0A087WZG4 1122 aa18.06■□□□□ 0.48
PRNP-201ENST00000379440 MCCP23508 829 aa18.05■□□□□ 0.48
PRNP-201ENST00000379440 TAF7LQ5H9L4 462 aa18.05■□□□□ 0.48
PRNP-201ENST00000379440 TLR7Q9NYK1 1049 aaKnown RBP18.05■□□□□ 0.48
PRNP-201ENST00000379440 AK9Q5TCS8 1911 aa18.05■□□□□ 0.48
PRNP-201ENST00000379440 CWC27Q6UX04 472 aaKnown RBP18.05■□□□□ 0.48
PRNP-201ENST00000379440 SHANK3Q9BYB0 1731 aa18.04■□□□□ 0.48
PRNP-201ENST00000379440 SGSM2O43147 1006 aa18.04■□□□□ 0.48
PRNP-201ENST00000379440 SSFA2P28290 1259 aa18.04■□□□□ 0.48
PRNP-201ENST00000379440 KCPQ6ZWJ8 1503 aa18.04■□□□□ 0.48
PRNP-201ENST00000379440 LAMB4A4D0S4 1761 aa18.04■□□□□ 0.48
PRNP-201ENST00000379440 ARFGEF2Q9Y6D5 1785 aa18.04■□□□□ 0.48
PRNP-201ENST00000379440 ZGPATQ8N5A5 531 aaKnown RBP18.03■□□□□ 0.48
PRNP-201ENST00000379440 GPATCH3Q96I76 525 aa18.03■□□□□ 0.48
PRNP-201ENST00000379440 AFDNP55196 1824 aaKnown RBP18.02■□□□□ 0.48
PRNP-201ENST00000379440 ZBTB3Q9H5J0 574 aa18.02■□□□□ 0.48
PRNP-201ENST00000379440 ERBB4Q15303 1308 aa18.02■□□□□ 0.48
PRNP-201ENST00000379440 UBR2Q8IWV8 1755 aa18.02■□□□□ 0.48
PRNP-201ENST00000379440 RFX5P48382 616 aaPredicted RBP18.02■□□□□ 0.47
PRNP-201ENST00000379440 CASP7P55210 303 aa18.02■□□□□ 0.47
PRNP-201ENST00000379440 ANAPC15P60006 121 aa18.02■□□□□ 0.47
PRNP-201ENST00000379440 TRAK2O60296 914 aa18.01■□□□□ 0.47
PRNP-201ENST00000379440 HSPA4P34932 840 aa18.01■□□□□ 0.47
PRNP-201ENST00000379440 PTPN12Q05209 780 aaKnown RBP18.01■□□□□ 0.47
PRNP-201ENST00000379440 UPF3BQ9BZI7 483 aaKnown RBP18.01■□□□□ 0.47
PRNP-201ENST00000379440 TMOD3Q9NYL9 352 aa18.01■□□□□ 0.47
PRNP-201ENST00000379440 RABL6Q3YEC7 729 aaPredicted RBP18.01■□□□□ 0.47
PRNP-201ENST00000379440 LSG1Q9H089 658 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms