RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 SSRP1Q08945 709 aaKnown RBP12.71□□□□□ -0.37
LINC00654-201ENST00000379053 CCDC83Q8IWF9 413 aa12.71□□□□□ -0.37
LINC00654-201ENST00000379053 ABCC11Q96J66 1382 aa12.71□□□□□ -0.37
LINC00654-201ENST00000379053 HMGB1P09429 215 aaKnown RBP12.71□□□□□ -0.38
LINC00654-201ENST00000379053 ANAPC15P60006 121 aa12.71□□□□□ -0.38
LINC00654-201ENST00000379053 ALDH1L2Q3SY69 923 aa12.71□□□□□ -0.38
LINC00654-201ENST00000379053 TAX1BP1Q86VP1 789 aa12.71□□□□□ -0.38
LINC00654-201ENST00000379053 H0YHG0 523 aa12.7□□□□□ -0.38
LINC00654-201ENST00000379053 PDIA4P13667 645 aaKnown RBP12.7□□□□□ -0.38
LINC00654-201ENST00000379053 EZRP15311 586 aaKnown RBP12.7□□□□□ -0.38
LINC00654-201ENST00000379053 SSH1Q8WYL5 1049 aa12.7□□□□□ -0.38
LINC00654-201ENST00000379053 KIAA1328Q86T90 577 aa12.7□□□□□ -0.38
LINC00654-201ENST00000379053 CRNKL1Q9BZJ0 848 aaKnown RBP12.7□□□□□ -0.38
LINC00654-201ENST00000379053 SMTNL1A8MU46 457 aa12.7□□□□□ -0.38
LINC00654-201ENST00000379053 KIF20AO95235 890 aa12.7□□□□□ -0.38
LINC00654-201ENST00000379053 SLFN5Q08AF3 891 aa12.7□□□□□ -0.38
LINC00654-201ENST00000379053 HMGXB3Q12766 1538 aa12.7□□□□□ -0.38
LINC00654-201ENST00000379053 FANCAO15360 1455 aa12.7□□□□□ -0.38
LINC00654-201ENST00000379053 FKBP15Q5T1M5 1219 aa12.7□□□□□ -0.38
LINC00654-201ENST00000379053 RBM26Q5T8P6 1007 aaKnown RBP12.7□□□□□ -0.38
LINC00654-201ENST00000379053 MTERF4Q7Z6M4 381 aaKnown RBP12.7□□□□□ -0.38
LINC00654-201ENST00000379053 IQGAP2Q13576 1575 aa12.69□□□□□ -0.38
LINC00654-201ENST00000379053 JARID2Q92833 1246 aaPredicted RBP12.69□□□□□ -0.38
LINC00654-201ENST00000379053 CENPHQ9H3R5 247 aa12.69□□□□□ -0.38
LINC00654-201ENST00000379053 SUPT6HQ7KZ85 1726 aaKnown RBP12.69□□□□□ -0.38
LINC00654-201ENST00000379053 EPB41L2O43491 1005 aaKnown RBP12.69□□□□□ -0.38
LINC00654-201ENST00000379053 KLHL10Q6JEL2 608 aa12.69□□□□□ -0.38
LINC00654-201ENST00000379053 GBP2P32456 591 aaPredicted RBP12.69□□□□□ -0.38
LINC00654-201ENST00000379053 NOS1P29475 1434 aa12.69□□□□□ -0.38
LINC00654-201ENST00000379053 VEZTQ9HBM0 779 aa12.69□□□□□ -0.38
LINC00654-201ENST00000379053 NIP7Q9Y221 180 aaKnown RBP eCLIP12.69□□□□□ -0.38
LINC00654-201ENST00000379053 ANKRD13DQ6ZTN6 518 aa12.69□□□□□ -0.38
LINC00654-201ENST00000379053 UQCRFS1P1P0C7P4 283 aa12.68□□□□□ -0.38
LINC00654-201ENST00000379053 GUCY1B3Q02153 619 aa12.68□□□□□ -0.38
LINC00654-201ENST00000379053 CACNA2D4Q7Z3S7 1137 aa12.68□□□□□ -0.38
LINC00654-201ENST00000379053 BRPF3Q9ULD4 1205 aa12.68□□□□□ -0.38
LINC00654-201ENST00000379053 PI4KAP2A4QPH2 592 aa12.68□□□□□ -0.38
LINC00654-201ENST00000379053 PI4KAP1Q8N8J0 262 aa12.68□□□□□ -0.38
LINC00654-201ENST00000379053 CCDC112Q8NEF3 446 aa12.68□□□□□ -0.38
LINC00654-201ENST00000379053 STX8Q9UNK0 236 aa12.68□□□□□ -0.38
LINC00654-201ENST00000379053 CFAP100Q494V2 611 aa12.68□□□□□ -0.38
LINC00654-201ENST00000379053 VPS36Q86VN1 386 aa12.68□□□□□ -0.38
LINC00654-201ENST00000379053 TSPYL1Q9H0U9 437 aa12.68□□□□□ -0.38
LINC00654-201ENST00000379053 RTCBQ9Y3I0 505 aaKnown RBP12.68□□□□□ -0.38
LINC00654-201ENST00000379053 CAMSAP2Q08AD1 1489 aa12.68□□□□□ -0.38
LINC00654-201ENST00000379053 TMEM67Q5HYA8 995 aa12.68□□□□□ -0.38
LINC00654-201ENST00000379053 DPY19L2Q6NUT2 758 aa12.68□□□□□ -0.38
LINC00654-201ENST00000379053 MFSD6Q6ZSS7 791 aa12.68□□□□□ -0.38
LINC00654-201ENST00000379053 CDCA7Q9BWT1 371 aaPredicted RBP12.68□□□□□ -0.38
LINC00654-201ENST00000379053 PRXQ9BXM0 1461 aa12.67□□□□□ -0.38
LINC00654-201ENST00000379053 ECM2O94769 699 aaPredicted RBP12.67□□□□□ -0.38
LINC00654-201ENST00000379053 IQCEQ6IPM2 695 aa12.67□□□□□ -0.38
LINC00654-201ENST00000379053 CABLES1Q8TDN4 633 aa12.67□□□□□ -0.38
LINC00654-201ENST00000379053 CKAP2LQ8IYA6 745 aa12.67□□□□□ -0.38
LINC00654-201ENST00000379053 ANXA1P04083 346 aa12.67□□□□□ -0.38
LINC00654-201ENST00000379053 CETN1Q12798 172 aa12.67□□□□□ -0.38
LINC00654-201ENST00000379053 FILIP1Q7Z7B0 1213 aa12.67□□□□□ -0.38
LINC00654-201ENST00000379053 ZGPATQ8N5A5 531 aaKnown RBP12.67□□□□□ -0.38
LINC00654-201ENST00000379053 FGFR1OPO95684 399 aaKnown RBP12.67□□□□□ -0.38
LINC00654-201ENST00000379053 PICALMQ13492 652 aa12.67□□□□□ -0.38
LINC00654-201ENST00000379053 IQSEC3Q9UPP2 1182 aaPredicted RBP12.67□□□□□ -0.38
LINC00654-201ENST00000379053 CALML4Q96GE6 196 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 ECHDC1Q9NTX5 307 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 KIF14Q15058 1648 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 ARHGAP29Q52LW3 1261 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 MPNDQ8N594 471 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 FERMT2Q96AC1 680 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 ZC3H12CQ9C0D7 883 aaKnown RBP12.66□□□□□ -0.38
LINC00654-201ENST00000379053 TCP11L1Q9NUJ3 509 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 PTPRCP08575 1304 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 IDEP14735 1019 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 CCDC144CPQ8IYA2 1237 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 GRIN2AQ12879 1464 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 IL2RBP14784 551 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 SPA17Q15506 151 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 TPTE2Q6XPS3 522 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 NYXQ9GZU5 481 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 HAND2P61296 217 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 KIF22Q14807 665 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 ZNF804AQ7Z570 1209 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 EVI5LQ96CN4 794 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 TTC21AQ8NDW8 1320 aa12.66□□□□□ -0.38
LINC00654-201ENST00000379053 PIK3R4Q99570 1358 aa12.65□□□□□ -0.38
LINC00654-201ENST00000379053 CCT2P78371 535 aaKnown RBP12.65□□□□□ -0.38
LINC00654-201ENST00000379053 STXBP4Q6ZWJ1 553 aa12.65□□□□□ -0.38
LINC00654-201ENST00000379053 C14orf93Q9H972 538 aaKnown RBP12.65□□□□□ -0.38
LINC00654-201ENST00000379053 MACROD2A1Z1Q3 448 aa12.65□□□□□ -0.38
LINC00654-201ENST00000379053 TSPY3P0CV98 308 aa12.65□□□□□ -0.38
LINC00654-201ENST00000379053 TSPY8P0CW00 308 aa12.65□□□□□ -0.38
LINC00654-201ENST00000379053 SYCP3Q8IZU3 236 aa12.65□□□□□ -0.38
LINC00654-201ENST00000379053 HMGN5P82970 282 aaKnown RBP12.65□□□□□ -0.38
LINC00654-201ENST00000379053 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
LINC00654-201ENST00000379053 BICD1Q96G01 975 aa12.65□□□□□ -0.38
LINC00654-201ENST00000379053 UTP14AQ9BVJ6 771 aaKnown RBP12.65□□□□□ -0.38
LINC00654-201ENST00000379053 PRKCSHP14314 528 aaPredicted RBP12.65□□□□□ -0.39
LINC00654-201ENST00000379053 TCERG1LQ5VWI1 586 aa12.65□□□□□ -0.39
LINC00654-201ENST00000379053 SH2B1Q9NRF2 756 aaPredicted RBP12.65□□□□□ -0.39
LINC00654-201ENST00000379053 CYP7A1P22680 504 aa12.64□□□□□ -0.39
LINC00654-201ENST00000379053 IARSP41252 1262 aaKnown RBP12.64□□□□□ -0.39
LINC00654-201ENST00000379053 TRAF1Q13077 416 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms