RNA–Protein interactions for RNA: ENST00000377050.4

UBD-203, Transcript of ubiquitin D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBD, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBD-203ENST00000377050 PXDNLA1KZ92 1463 aa13.85□□□□□ -0.19
UBD-203ENST00000377050 KIF13BQ9NQT8 1826 aa13.85□□□□□ -0.19
UBD-203ENST00000377050 PALLDQ8WX93 1383 aa13.84□□□□□ -0.19
UBD-203ENST00000377050 DLG5Q8TDM6 1919 aa13.84□□□□□ -0.19
UBD-203ENST00000377050 N4BP2Q86UW6 1770 aaPredicted RBP13.84□□□□□ -0.19
UBD-203ENST00000377050 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.84□□□□□ -0.19
UBD-203ENST00000377050 C9orf131Q5VYM1 1079 aa13.84□□□□□ -0.19
UBD-203ENST00000377050 CHD1LQ86WJ1 897 aa13.84□□□□□ -0.19
UBD-203ENST00000377050 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.84□□□□□ -0.19
UBD-203ENST00000377050 COG3Q96JB2 828 aa13.84□□□□□ -0.19
UBD-203ENST00000377050 KCPQ6ZWJ8 1503 aa13.84□□□□□ -0.19
UBD-203ENST00000377050 SSFA2P28290 1259 aa13.83□□□□□ -0.2
UBD-203ENST00000377050 LTV1Q96GA3 475 aaPredicted RBP13.83□□□□□ -0.2
UBD-203ENST00000377050 RRAGCQ9HB90 399 aa13.83□□□□□ -0.2
UBD-203ENST00000377050 CHMP5Q9NZZ3 219 aa13.83□□□□□ -0.2
UBD-203ENST00000377050 CIZ1Q9ULV3 898 aaPredicted RBP13.83□□□□□ -0.2
UBD-203ENST00000377050 TOGARAM1Q9Y4F4 1720 aa13.83□□□□□ -0.2
UBD-203ENST00000377050 L1TD1Q5T7N2 865 aaKnown RBP13.82□□□□□ -0.2
UBD-203ENST00000377050 KIAA1551Q9HCM1 1747 aa13.81□□□□□ -0.2
UBD-203ENST00000377050 IP6K1Q92551 441 aa13.81□□□□□ -0.2
UBD-203ENST00000377050 SMARCC1Q92922 1105 aaPredicted RBP13.81□□□□□ -0.2
UBD-203ENST00000377050 ARFGEF1Q9Y6D6 1849 aa13.8□□□□□ -0.2
UBD-203ENST00000377050 A0A0G2JLW4 131 aa13.8□□□□□ -0.2
UBD-203ENST00000377050 PTMSP20962 102 aa13.8□□□□□ -0.2
UBD-203ENST00000377050 PHACTR3Q96KR7 559 aa13.8□□□□□ -0.2
UBD-203ENST00000377050 MMP10P09238 476 aa13.79□□□□□ -0.2
UBD-203ENST00000377050 TWISTNBQ3B726 338 aaPredicted RBP13.79□□□□□ -0.2
UBD-203ENST00000377050 NME9Q86XW9 330 aa13.79□□□□□ -0.2
UBD-203ENST00000377050 HSCBQ8IWL3 235 aa13.79□□□□□ -0.2
UBD-203ENST00000377050 MBIPQ9NS73 344 aa13.79□□□□□ -0.2
UBD-203ENST00000377050 RNF181Q9P0P0 153 aa13.79□□□□□ -0.2
UBD-203ENST00000377050 ISY1Q9ULR0 285 aaKnown RBP13.79□□□□□ -0.2
UBD-203ENST00000377050 BRCA1P38398 1863 aaKnown RBP13.78□□□□□ -0.2
UBD-203ENST00000377050 DDIT3P35638 169 aa13.78□□□□□ -0.2
UBD-203ENST00000377050 INTS3Q68E01 1043 aaKnown RBP13.78□□□□□ -0.2
UBD-203ENST00000377050 MPRIPQ6WCQ1 1025 aa13.78□□□□□ -0.2
UBD-203ENST00000377050 SP7Q8TDD2 431 aaPredicted RBP13.78□□□□□ -0.2
UBD-203ENST00000377050 CCDC87Q9NVE4 849 aa13.78□□□□□ -0.2
UBD-203ENST00000377050 EMILIN1Q9Y6C2 1016 aa13.78□□□□□ -0.2
UBD-203ENST00000377050 MEGF6O75095 1541 aa13.78□□□□□ -0.2
UBD-203ENST00000377050 MCM4P33991 863 aa13.77□□□□□ -0.21
UBD-203ENST00000377050 PRDM10Q9NQV6 1147 aa13.77□□□□□ -0.21
UBD-203ENST00000377050 PTPRCP08575 1304 aa13.76□□□□□ -0.21
UBD-203ENST00000377050 PCDH11XQ9BZA7 1347 aa13.76□□□□□ -0.21
UBD-203ENST00000377050 PCDH11YQ9BZA8 1340 aa13.76□□□□□ -0.21
UBD-203ENST00000377050 DPEP1P16444 411 aa13.76□□□□□ -0.21
UBD-203ENST00000377050 MFAP1P55081 439 aaKnown RBP13.76□□□□□ -0.21
UBD-203ENST00000377050 AMIGO3Q86WK7 504 aa13.76□□□□□ -0.21
UBD-203ENST00000377050 RPAP2Q8IXW5 612 aaPredicted RBP13.76□□□□□ -0.21
UBD-203ENST00000377050 RAPGEF4Q8WZA2 1011 aa13.76□□□□□ -0.21
UBD-203ENST00000377050 RGPD2P0DJD1 1756 aa13.76□□□□□ -0.21
UBD-203ENST00000377050 ZC3H4Q9UPT8 1303 aaKnown RBP13.75□□□□□ -0.21
UBD-203ENST00000377050 DDX11L8A8MPP1 907 aa13.75□□□□□ -0.21
UBD-203ENST00000377050 CHL1O00533 1208 aa13.75□□□□□ -0.21
UBD-203ENST00000377050 GNPATO15228 680 aa13.75□□□□□ -0.21
UBD-203ENST00000377050 HMOX1P09601 288 aa13.75□□□□□ -0.21
UBD-203ENST00000377050 REM2Q8IYK8 340 aaPredicted RBP13.75□□□□□ -0.21
UBD-203ENST00000377050 NLGN1Q8N2Q7 840 aa13.75□□□□□ -0.21
UBD-203ENST00000377050 AIDAQ96BJ3 306 aa13.75□□□□□ -0.21
UBD-203ENST00000377050 SLKQ9H2G2 1235 aaPredicted RBP13.75□□□□□ -0.21
UBD-203ENST00000377050 DCTPP1Q9H773 170 aa13.75□□□□□ -0.21
UBD-203ENST00000377050 PIM2Q9P1W9 311 aa13.75□□□□□ -0.21
UBD-203ENST00000377050 ITGB4P16144 1822 aa13.74□□□□□ -0.21
UBD-203ENST00000377050 SOS1Q07889 1333 aaPredicted RBP13.74□□□□□ -0.21
UBD-203ENST00000377050 VEGFAP15692 232 aaPredicted RBP13.74□□□□□ -0.21
UBD-203ENST00000377050 AMPHP49418 695 aa13.74□□□□□ -0.21
UBD-203ENST00000377050 SMIM5Q71RC9 77 aa13.74□□□□□ -0.21
UBD-203ENST00000377050 FAM43AQ8N2R8 423 aa13.74□□□□□ -0.21
UBD-203ENST00000377050 TSPYL6Q8N831 410 aa13.74□□□□□ -0.21
UBD-203ENST00000377050 LNPKQ9C0E8 428 aa13.74□□□□□ -0.21
UBD-203ENST00000377050 FSD2A1L4K1 749 aa13.73□□□□□ -0.21
UBD-203ENST00000377050 CDC45O75419 566 aa13.73□□□□□ -0.21
UBD-203ENST00000377050 TATP17735 454 aaPredicted RBP13.73□□□□□ -0.21
UBD-203ENST00000377050 DALRD3Q5D0E6 543 aaKnown RBP13.73□□□□□ -0.21
UBD-203ENST00000377050 ANKRD44Q8N8A2 993 aa13.73□□□□□ -0.21
UBD-203ENST00000377050 IL27Q8NEV9 243 aa13.73□□□□□ -0.21
UBD-203ENST00000377050 SBF1O95248 1867 aa13.73□□□□□ -0.21
UBD-203ENST00000377050 C4AP0C0L4 1744 aa13.73□□□□□ -0.21
UBD-203ENST00000377050 RTL1A6NKG5 1358 aa13.72□□□□□ -0.21
UBD-203ENST00000377050 HOXC9P31274 260 aa13.72□□□□□ -0.21
UBD-203ENST00000377050 CTCFP49711 727 aaPredicted RBP13.72□□□□□ -0.21
UBD-203ENST00000377050 ANKRD45Q5TZF3 282 aa13.72□□□□□ -0.21
UBD-203ENST00000377050 SIRT2Q8IXJ6 389 aa13.72□□□□□ -0.21
UBD-203ENST00000377050 C8orf58Q8NAV2 365 aa13.72□□□□□ -0.21
UBD-203ENST00000377050 DCAF5Q96JK2 942 aa13.72□□□□□ -0.21
UBD-203ENST00000377050 PARP3Q9Y6F1 533 aa13.72□□□□□ -0.21
UBD-203ENST00000377050 LOC102724428A0A0B4J2F2 783 aa13.71□□□□□ -0.21
UBD-203ENST00000377050 FOXN1O15353 648 aa13.71□□□□□ -0.21
UBD-203ENST00000377050 HTATSF1O43719 755 aaKnown RBP13.71□□□□□ -0.21
UBD-203ENST00000377050 SIK1P57059 783 aa13.71□□□□□ -0.21
UBD-203ENST00000377050 MLLT1Q03111 559 aaPredicted RBP13.71□□□□□ -0.21
UBD-203ENST00000377050 EIF4A2Q14240 407 aaKnown RBP13.71□□□□□ -0.21
UBD-203ENST00000377050 CLEC17AQ6ZS10 378 aa13.71□□□□□ -0.21
UBD-203ENST00000377050 LINC00116Q8NCU8 138 aa13.71□□□□□ -0.21
UBD-203ENST00000377050 KDRP35968 1356 aa13.71□□□□□ -0.22
UBD-203ENST00000377050 TRAPPC3LQ5T215 181 aa13.7□□□□□ -0.22
UBD-203ENST00000377050 KIF2CQ99661 725 aa13.7□□□□□ -0.22
UBD-203ENST00000377050 CREBZFQ9NS37 354 aa13.7□□□□□ -0.22
UBD-203ENST00000377050 BABAM1Q9NWV8 329 aa13.7□□□□□ -0.22
UBD-203ENST00000377050 MKRN1Q9UHC7 482 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms