RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 METTL22Q9BUU2 404 aaPredicted RBP15.64■□□□□ 0.09
CLCN6-206ENST00000376496 NEXNQ0ZGT2 675 aa15.63■□□□□ 0.09
CLCN6-206ENST00000376496 SSH3Q8TE77 659 aa15.63■□□□□ 0.09
CLCN6-206ENST00000376496 PA2G4Q9UQ80 394 aaKnown RBP15.63■□□□□ 0.09
CLCN6-206ENST00000376496 LAMB4A4D0S4 1761 aa15.63■□□□□ 0.09
CLCN6-206ENST00000376496 JCADQ9P266 1359 aa15.63■□□□□ 0.09
CLCN6-206ENST00000376496 WNK3Q9BYP7 1800 aa15.63■□□□□ 0.09
CLCN6-206ENST00000376496 HSPA1LP34931 641 aa15.63■□□□□ 0.09
CLCN6-206ENST00000376496 UNC5CLQ8IV45 518 aa15.63■□□□□ 0.09
CLCN6-206ENST00000376496 BICC1Q9H694 974 aaKnown RBP15.62■□□□□ 0.09
CLCN6-206ENST00000376496 BCL9O00512 1426 aa15.62■□□□□ 0.09
CLCN6-206ENST00000376496 GCKRQ14397 625 aa15.62■□□□□ 0.09
CLCN6-206ENST00000376496 EPHA10Q5JZY3 1008 aa15.62■□□□□ 0.09
CLCN6-206ENST00000376496 LRP6O75581 1613 aa15.62■□□□□ 0.09
CLCN6-206ENST00000376496 BMP2KLQ5H9B9 411 aa15.61■□□□□ 0.09
CLCN6-206ENST00000376496 FAM182BQ5T319 152 aa15.61■□□□□ 0.09
CLCN6-206ENST00000376496 LRRCC1Q9C099 1032 aa15.61■□□□□ 0.09
CLCN6-206ENST00000376496 BCL9LQ86UU0 1499 aa15.61■□□□□ 0.09
CLCN6-206ENST00000376496 IBTKQ9P2D0 1353 aaPredicted RBP15.61■□□□□ 0.09
CLCN6-206ENST00000376496 KCNQ2O43526 872 aa15.61■□□□□ 0.09
CLCN6-206ENST00000376496 POLA2Q14181 598 aa15.61■□□□□ 0.09
CLCN6-206ENST00000376496 DOT1LQ8TEK3 1739 aa15.61■□□□□ 0.09
CLCN6-206ENST00000376496 UBE3BQ7Z3V4 1068 aa15.61■□□□□ 0.09
CLCN6-206ENST00000376496 KLHDC4Q8TBB5 520 aa15.61■□□□□ 0.09
CLCN6-206ENST00000376496 PLBD2Q8NHP8 589 aa15.6■□□□□ 0.09
CLCN6-206ENST00000376496 TTC22Q5TAA0 569 aa15.6■□□□□ 0.09
CLCN6-206ENST00000376496 NUTM1Q86Y26 1132 aa15.6■□□□□ 0.09
CLCN6-206ENST00000376496 THRAP3Q9Y2W1 955 aaKnown RBP15.6■□□□□ 0.09
CLCN6-206ENST00000376496 ARFGEF2Q9Y6D5 1785 aa15.6■□□□□ 0.09
CLCN6-206ENST00000376496 A0A087WZG4 1122 aa15.58■□□□□ 0.09
CLCN6-206ENST00000376496 PTF1AQ7RTS3 328 aa15.58■□□□□ 0.09
CLCN6-206ENST00000376496 USP21Q9UK80 565 aa15.58■□□□□ 0.09
CLCN6-206ENST00000376496 OS9Q13438 667 aaPredicted RBP15.58■□□□□ 0.08
CLCN6-206ENST00000376496 TBC1D9Q6ZT07 1266 aa15.58■□□□□ 0.08
CLCN6-206ENST00000376496 CDCA7Q9BWT1 371 aaPredicted RBP15.58■□□□□ 0.08
CLCN6-206ENST00000376496 SIL1Q9H173 461 aa15.58■□□□□ 0.08
CLCN6-206ENST00000376496 NOP58Q9Y2X3 529 aaKnown RBP15.58■□□□□ 0.08
CLCN6-206ENST00000376496 PDE1AP54750 535 aa15.57■□□□□ 0.08
CLCN6-206ENST00000376496 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.57■□□□□ 0.08
CLCN6-206ENST00000376496 NWD2Q9ULI1 1742 aa15.57■□□□□ 0.08
CLCN6-206ENST00000376496 AFDNP55196 1824 aaKnown RBP15.57■□□□□ 0.08
CLCN6-206ENST00000376496 BARGINQ6ZT62 677 aa15.57■□□□□ 0.08
CLCN6-206ENST00000376496 RHPN1Q8TCX5 695 aa15.57■□□□□ 0.08
CLCN6-206ENST00000376496 ZBTB1Q9Y2K1 713 aa15.57■□□□□ 0.08
CLCN6-206ENST00000376496 SDSP20132 328 aa15.57■□□□□ 0.08
CLCN6-206ENST00000376496 KCNQ4P56696 695 aa15.57■□□□□ 0.08
CLCN6-206ENST00000376496 MEX3CQ5U5Q3 659 aaKnown RBP15.57■□□□□ 0.08
CLCN6-206ENST00000376496 UTYO14607 1347 aa15.57■□□□□ 0.08
CLCN6-206ENST00000376496 ERBB4Q15303 1308 aa15.57■□□□□ 0.08
CLCN6-206ENST00000376496 CYP19A1P11511 503 aaPredicted RBP15.56■□□□□ 0.08
CLCN6-206ENST00000376496 VPS72Q15906 364 aa15.56■□□□□ 0.08
CLCN6-206ENST00000376496 STARD3NLO95772 234 aa15.55■□□□□ 0.08
CLCN6-206ENST00000376496 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.55■□□□□ 0.08
CLCN6-206ENST00000376496 ERICH6Q7L0X2 663 aa15.55■□□□□ 0.08
CLCN6-206ENST00000376496 UPF2Q9HAU5 1272 aaKnown RBP15.55■□□□□ 0.08
CLCN6-206ENST00000376496 SALL3Q9BXA9 1300 aa15.54■□□□□ 0.08
CLCN6-206ENST00000376496 MAP4K4O95819 1239 aaPredicted RBP15.54■□□□□ 0.08
CLCN6-206ENST00000376496 MX1P20591 662 aa15.54■□□□□ 0.08
CLCN6-206ENST00000376496 MTX1Q13505 466 aa15.54■□□□□ 0.08
CLCN6-206ENST00000376496 FNBP4Q8N3X1 1017 aaPredicted RBP15.54■□□□□ 0.08
CLCN6-206ENST00000376496 TBC1D32Q96NH3 1257 aa15.54■□□□□ 0.08
CLCN6-206ENST00000376496 HLFQ16534 295 aa15.54■□□□□ 0.08
CLCN6-206ENST00000376496 VSIG10Q8N0Z9 540 aa15.54■□□□□ 0.08
CLCN6-206ENST00000376496 TBC1D2BQ9UPU7 963 aa15.54■□□□□ 0.08
CLCN6-206ENST00000376496 GPTP24298 496 aa15.53■□□□□ 0.08
CLCN6-206ENST00000376496 C22orf23Q9BZE7 217 aa15.53■□□□□ 0.08
CLCN6-206ENST00000376496 CHMP3Q9Y3E7 222 aa15.53■□□□□ 0.08
CLCN6-206ENST00000376496 CDC45O75419 566 aa15.53■□□□□ 0.08
CLCN6-206ENST00000376496 ATP6V1AP38606 617 aa15.53■□□□□ 0.08
CLCN6-206ENST00000376496 TEX13AQ9BXU3 409 aaPredicted RBP15.53■□□□□ 0.08
CLCN6-206ENST00000376496 NUP188Q5SRE5 1749 aa15.53■□□□□ 0.08
CLCN6-206ENST00000376496 CASP7P55210 303 aa15.52■□□□□ 0.08
CLCN6-206ENST00000376496 ITPK1Q13572 414 aa15.52■□□□□ 0.08
CLCN6-206ENST00000376496 SYNE4Q8N205 404 aa15.52■□□□□ 0.08
CLCN6-206ENST00000376496 CWC25Q9NXE8 425 aaPredicted RBP15.52■□□□□ 0.08
CLCN6-206ENST00000376496 SPATA31A6Q5VVP1 1343 aa15.52■□□□□ 0.07
CLCN6-206ENST00000376496 KIF1BPQ96EK5 621 aa15.52■□□□□ 0.07
CLCN6-206ENST00000376496 RAB11FIP3O75154 756 aa15.51■□□□□ 0.07
CLCN6-206ENST00000376496 CCDC85AQ96PX6 553 aaPredicted RBP15.51■□□□□ 0.07
CLCN6-206ENST00000376496 SASH1O94885 1247 aa15.51■□□□□ 0.07
CLCN6-206ENST00000376496 LMBR1LQ6UX01 489 aa15.51■□□□□ 0.07
CLCN6-206ENST00000376496 KIF6Q6ZMV9 814 aa15.51■□□□□ 0.07
CLCN6-206ENST00000376496 SMIM5Q71RC9 77 aa15.51■□□□□ 0.07
CLCN6-206ENST00000376496 RILPL2Q969X0 211 aa15.51■□□□□ 0.07
CLCN6-206ENST00000376496 AFF2P51816 1311 aa15.51■□□□□ 0.07
CLCN6-206ENST00000376496 LOC102724428A0A0B4J2F2 783 aa15.5■□□□□ 0.07
CLCN6-206ENST00000376496 TRIM6-TRIM34B2RNG4 842 aa15.5■□□□□ 0.07
CLCN6-206ENST00000376496 SIK1P57059 783 aa15.5■□□□□ 0.07
CLCN6-206ENST00000376496 TJP1Q07157 1748 aa15.5■□□□□ 0.07
CLCN6-206ENST00000376496 H7C1W4 665 aa15.5■□□□□ 0.07
CLCN6-206ENST00000376496 FAM89AQ96GI7 184 aa15.5■□□□□ 0.07
CLCN6-206ENST00000376496 DDRGK1Q96HY6 314 aa15.5■□□□□ 0.07
CLCN6-206ENST00000376496 OSBPL3Q9H4L5 887 aa15.5■□□□□ 0.07
CLCN6-206ENST00000376496 PALLDQ8WX93 1383 aa15.49■□□□□ 0.07
CLCN6-206ENST00000376496 FOXO4P98177 505 aa15.49■□□□□ 0.07
CLCN6-206ENST00000376496 TCIRG1Q13488 830 aa15.49■□□□□ 0.07
CLCN6-206ENST00000376496 HDAC5Q9UQL6 1122 aa15.49■□□□□ 0.07
CLCN6-206ENST00000376496 G3BP1Q13283 466 aaKnown RBP eCLIP15.49■□□□□ 0.07
CLCN6-206ENST00000376496 CCDC8Q9H0W5 538 aaPredicted RBP15.49■□□□□ 0.07
CLCN6-206ENST00000376496 CRKLP46109 303 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms