RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 SALL2Q9Y467 1007 aaPredicted RBP14.3□□□□□ -0.12
HLA-DQA1-202ENST00000374949 PCNTO95613 3336 aa14.3□□□□□ -0.12
HLA-DQA1-202ENST00000374949 SLX4Q8IY92 1834 aa14.29□□□□□ -0.12
HLA-DQA1-202ENST00000374949 C21orf2O43822 256 aa14.29□□□□□ -0.12
HLA-DQA1-202ENST00000374949 TEFQ10587 303 aa14.29□□□□□ -0.12
HLA-DQA1-202ENST00000374949 TBC1D2BQ9UPU7 963 aa14.29□□□□□ -0.12
HLA-DQA1-202ENST00000374949 POTECB2RU33 542 aa14.28□□□□□ -0.12
HLA-DQA1-202ENST00000374949 ZNF790Q6PG37 636 aa14.28□□□□□ -0.12
HLA-DQA1-202ENST00000374949 TNS4Q8IZW8 715 aa14.28□□□□□ -0.12
HLA-DQA1-202ENST00000374949 IL17REQ8NFR9 667 aa14.28□□□□□ -0.12
HLA-DQA1-202ENST00000374949 GNAT3A8MTJ3 354 aa14.27□□□□□ -0.13
HLA-DQA1-202ENST00000374949 NEFMP07197 916 aa14.27□□□□□ -0.13
HLA-DQA1-202ENST00000374949 HSPA1AP0DMV8 641 aaKnown RBP14.27□□□□□ -0.13
HLA-DQA1-202ENST00000374949 HSPA1BP0DMV9 641 aaKnown RBP14.27□□□□□ -0.13
HLA-DQA1-202ENST00000374949 PDE6BP35913 854 aa14.27□□□□□ -0.13
HLA-DQA1-202ENST00000374949 ERFEQ4G0M1 354 aa14.27□□□□□ -0.13
HLA-DQA1-202ENST00000374949 NCBP3Q53F19 620 aaKnown RBP14.27□□□□□ -0.13
HLA-DQA1-202ENST00000374949 PLEKHF1Q96S99 279 aa14.27□□□□□ -0.13
HLA-DQA1-202ENST00000374949 BRIP1Q9BX63 1249 aa14.27□□□□□ -0.13
HLA-DQA1-202ENST00000374949 MAPK8IP3Q9UPT6 1336 aa14.26□□□□□ -0.13
HLA-DQA1-202ENST00000374949 A1BGP04217 495 aa14.26□□□□□ -0.13
HLA-DQA1-202ENST00000374949 IL6STP40189 918 aaPredicted RBP14.26□□□□□ -0.13
HLA-DQA1-202ENST00000374949 CNBD1Q8NA66 436 aa14.26□□□□□ -0.13
HLA-DQA1-202ENST00000374949 GAS2L2Q8NHY3 880 aa14.26□□□□□ -0.13
HLA-DQA1-202ENST00000374949 RSPH6AQ9H0K4 717 aa14.26□□□□□ -0.13
HLA-DQA1-202ENST00000374949 CEMIPQ8WUJ3 1361 aa14.25□□□□□ -0.13
HLA-DQA1-202ENST00000374949 NPHP1O15259 732 aa14.25□□□□□ -0.13
HLA-DQA1-202ENST00000374949 CAMTA2O94983 1202 aa14.25□□□□□ -0.13
HLA-DQA1-202ENST00000374949 PIP4K2AP48426 406 aaPredicted RBP14.25□□□□□ -0.13
HLA-DQA1-202ENST00000374949 FMNL2Q96PY5 1086 aa14.25□□□□□ -0.13
HLA-DQA1-202ENST00000374949 TAOK3Q9H2K8 898 aa14.25□□□□□ -0.13
HLA-DQA1-202ENST00000374949 LTBP3Q9NS15 1303 aa14.24□□□□□ -0.13
HLA-DQA1-202ENST00000374949 KCNQ3O43525 872 aa14.24□□□□□ -0.13
HLA-DQA1-202ENST00000374949 POTEIP0CG38 1075 aa14.24□□□□□ -0.13
HLA-DQA1-202ENST00000374949 POTEJP0CG39 1038 aa14.24□□□□□ -0.13
HLA-DQA1-202ENST00000374949 PRKAR2BP31323 418 aa14.24□□□□□ -0.13
HLA-DQA1-202ENST00000374949 DPY19L2Q6NUT2 758 aa14.24□□□□□ -0.13
HLA-DQA1-202ENST00000374949 PRPF40BQ6NWY9 871 aaKnown RBP14.24□□□□□ -0.13
HLA-DQA1-202ENST00000374949 TEX13AQ9BXU3 409 aaPredicted RBP14.24□□□□□ -0.13
HLA-DQA1-202ENST00000374949 PDZRN3Q9UPQ7 1066 aa14.24□□□□□ -0.13
HLA-DQA1-202ENST00000374949 DDNO94850 711 aaPredicted RBP14.23□□□□□ -0.13
HLA-DQA1-202ENST00000374949 ST5P78524 1137 aa14.23□□□□□ -0.13
HLA-DQA1-202ENST00000374949 DZIP3Q86Y13 1208 aaKnown RBP14.23□□□□□ -0.13
HLA-DQA1-202ENST00000374949 SETDB2Q96T68 719 aa14.23□□□□□ -0.13
HLA-DQA1-202ENST00000374949 PRAMEF22A3QJZ6 481 aa14.22□□□□□ -0.13
HLA-DQA1-202ENST00000374949 SRGNP10124 158 aa14.22□□□□□ -0.13
HLA-DQA1-202ENST00000374949 TMPOP42166 694 aaKnown RBP14.22□□□□□ -0.13
HLA-DQA1-202ENST00000374949 NEUROD2Q15784 382 aa14.22□□□□□ -0.13
HLA-DQA1-202ENST00000374949 CCDC27Q2M243 656 aa14.22□□□□□ -0.13
HLA-DQA1-202ENST00000374949 STYK1Q6J9G0 422 aa14.22□□□□□ -0.13
HLA-DQA1-202ENST00000374949 NPM2Q86SE8 214 aaKnown RBP14.22□□□□□ -0.13
HLA-DQA1-202ENST00000374949 CNKSR1Q969H4 720 aa14.22□□□□□ -0.13
HLA-DQA1-202ENST00000374949 PHACTR3Q96KR7 559 aa14.22□□□□□ -0.13
HLA-DQA1-202ENST00000374949 ZNF521Q96K83 1311 aa14.21□□□□□ -0.13
HLA-DQA1-202ENST00000374949 SCN4AP35499 1836 aa14.21□□□□□ -0.13
HLA-DQA1-202ENST00000374949 BTBD11A6QL63 1104 aa14.21□□□□□ -0.13
HLA-DQA1-202ENST00000374949 GOLGA2Q08379 1002 aa14.21□□□□□ -0.13
HLA-DQA1-202ENST00000374949 CHADLQ6NUI6 762 aa14.21□□□□□ -0.13
HLA-DQA1-202ENST00000374949 MKRN1Q9UHC7 482 aaKnown RBP14.21□□□□□ -0.13
HLA-DQA1-202ENST00000374949 RRP7AQ9Y3A4 280 aaKnown RBP14.21□□□□□ -0.13
HLA-DQA1-202ENST00000374949 LAMB4A4D0S4 1761 aa14.21□□□□□ -0.13
HLA-DQA1-202ENST00000374949 RIPK4P57078 832 aa14.2□□□□□ -0.14
HLA-DQA1-202ENST00000374949 WDR63Q8IWG1 891 aa14.2□□□□□ -0.14
HLA-DQA1-202ENST00000374949 WWC1Q8IX03 1113 aa14.2□□□□□ -0.14
HLA-DQA1-202ENST00000374949 MASTLQ96GX5 879 aa14.2□□□□□ -0.14
HLA-DQA1-202ENST00000374949 USP16Q9Y5T5 823 aa14.2□□□□□ -0.14
HLA-DQA1-202ENST00000374949 NFE2L2Q16236 605 aa14.19□□□□□ -0.14
HLA-DQA1-202ENST00000374949 SOGA3Q5TF21 947 aa14.19□□□□□ -0.14
HLA-DQA1-202ENST00000374949 NBPF5PQ86XG9 351 aaPredicted RBP14.19□□□□□ -0.14
HLA-DQA1-202ENST00000374949 CREBZFQ9NS37 354 aa14.19□□□□□ -0.14
HLA-DQA1-202ENST00000374949 ZNF541Q9H0D2 1346 aa14.18□□□□□ -0.14
HLA-DQA1-202ENST00000374949 CCDC93Q567U6 631 aa14.18□□□□□ -0.14
HLA-DQA1-202ENST00000374949 OLFM4Q6UX06 510 aa14.18□□□□□ -0.14
HLA-DQA1-202ENST00000374949 MCM10Q7L590 875 aa14.18□□□□□ -0.14
HLA-DQA1-202ENST00000374949 CDCA7LQ96GN5 454 aa14.18□□□□□ -0.14
HLA-DQA1-202ENST00000374949 ADAMTSL1Q8N6G6 1762 aa14.18□□□□□ -0.14
HLA-DQA1-202ENST00000374949 SLFN5Q08AF3 891 aa14.17□□□□□ -0.14
HLA-DQA1-202ENST00000374949 C7orf43Q8WVR3 580 aa14.17□□□□□ -0.14
HLA-DQA1-202ENST00000374949 ZNF277Q9NRM2 450 aaPredicted RBP14.17□□□□□ -0.14
HLA-DQA1-202ENST00000374949 PASKQ96RG2 1323 aa14.16□□□□□ -0.14
HLA-DQA1-202ENST00000374949 IQCA1LA6NCM1 817 aa14.16□□□□□ -0.14
HLA-DQA1-202ENST00000374949 FAM177BA6PVY3 158 aa14.16□□□□□ -0.14
HLA-DQA1-202ENST00000374949 NBPF26B4DH59 902 aa14.16□□□□□ -0.14
HLA-DQA1-202ENST00000374949 E9PSI1 815 aa14.16□□□□□ -0.14
HLA-DQA1-202ENST00000374949 NBPF10Q6P3W6 841 aaKnown RBP14.16□□□□□ -0.14
HLA-DQA1-202ENST00000374949 NBPF15Q8N660 670 aa14.16□□□□□ -0.14
HLA-DQA1-202ENST00000374949 L3MBTL3Q96JM7 780 aaPredicted RBP14.16□□□□□ -0.14
HLA-DQA1-202ENST00000374949 TRIM35Q9UPQ4 493 aa14.16□□□□□ -0.14
HLA-DQA1-202ENST00000374949 ZNF652Q9Y2D9 606 aa14.16□□□□□ -0.14
HLA-DQA1-202ENST00000374949 CNTNAP1P78357 1384 aa14.16□□□□□ -0.14
HLA-DQA1-202ENST00000374949 KDM3BQ7LBC6 1761 aa14.15□□□□□ -0.14
HLA-DQA1-202ENST00000374949 SNRPA1P09661 255 aaKnown RBP14.15□□□□□ -0.14
HLA-DQA1-202ENST00000374949 NPR1P16066 1061 aa14.15□□□□□ -0.14
HLA-DQA1-202ENST00000374949 FKBP4Q02790 459 aaKnown RBP eCLIP14.15□□□□□ -0.14
HLA-DQA1-202ENST00000374949 LMOD3Q0VAK6 560 aa14.15□□□□□ -0.14
HLA-DQA1-202ENST00000374949 DCTN1Q14203 1278 aa14.15□□□□□ -0.14
HLA-DQA1-202ENST00000374949 CLEC4GQ6UXB4 293 aa14.15□□□□□ -0.14
HLA-DQA1-202ENST00000374949 LDHDQ86WU2 507 aa14.15□□□□□ -0.14
HLA-DQA1-202ENST00000374949 TRMT2AQ8IZ69 625 aaKnown RBP14.15□□□□□ -0.14
HLA-DQA1-202ENST00000374949 TAF1DQ9H5J8 278 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms