RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 CEBPZQ03701 1054 aaKnown RBP15.54■□□□□ 0.08
RAPGEF1-201ENST00000372189 TTLL12Q14166 644 aaPredicted RBP15.54■□□□□ 0.08
RAPGEF1-201ENST00000372189 MINDY4BA8MYZ0 360 aa15.54■□□□□ 0.08
RAPGEF1-201ENST00000372189 DACH1Q9UI36 760 aa15.54■□□□□ 0.08
RAPGEF1-201ENST00000372189 IL16Q14005 1332 aa15.54■□□□□ 0.08
RAPGEF1-201ENST00000372189 GOLGA6L7A0A1B0GV03 622 aa15.54■□□□□ 0.08
RAPGEF1-201ENST00000372189 ERLIN1O75477 346 aa15.54■□□□□ 0.08
RAPGEF1-201ENST00000372189 EIF3JO75822 258 aaKnown RBP15.54■□□□□ 0.08
RAPGEF1-201ENST00000372189 SETDB2Q96T68 719 aa15.54■□□□□ 0.08
RAPGEF1-201ENST00000372189 CBFA2T2O43439 604 aa15.54■□□□□ 0.08
RAPGEF1-201ENST00000372189 ZSCAN31Q96LW9 406 aaPredicted RBP15.54■□□□□ 0.08
RAPGEF1-201ENST00000372189 CCDC8Q9H0W5 538 aaPredicted RBP15.54■□□□□ 0.08
RAPGEF1-201ENST00000372189 FLT4P35916 1363 aa15.53■□□□□ 0.08
RAPGEF1-201ENST00000372189 NPATQ14207 1427 aa15.53■□□□□ 0.08
RAPGEF1-201ENST00000372189 YTHDC2Q9H6S0 1430 aaKnown RBP15.53■□□□□ 0.08
RAPGEF1-201ENST00000372189 KIAA0754O94854 1291 aa15.53■□□□□ 0.08
RAPGEF1-201ENST00000372189 ZNF76P36508 570 aa15.53■□□□□ 0.08
RAPGEF1-201ENST00000372189 WASF1Q92558 559 aa15.53■□□□□ 0.08
RAPGEF1-201ENST00000372189 U3KPZ7 1027 aaPredicted RBP15.53■□□□□ 0.08
RAPGEF1-201ENST00000372189 CCDC152Q4G0S7 254 aa15.53■□□□□ 0.08
RAPGEF1-201ENST00000372189 LDHAL6AQ6ZMR3 332 aa15.53■□□□□ 0.08
RAPGEF1-201ENST00000372189 ANKRD13DQ6ZTN6 518 aa15.53■□□□□ 0.08
RAPGEF1-201ENST00000372189 PUS7Q96PZ0 661 aaKnown RBP15.53■□□□□ 0.08
RAPGEF1-201ENST00000372189 EIF4A2Q14240 407 aaKnown RBP15.53■□□□□ 0.08
RAPGEF1-201ENST00000372189 NAPBQ9H115 298 aa15.53■□□□□ 0.08
RAPGEF1-201ENST00000372189 SH3BGRP55822 239 aaPredicted RBP15.53■□□□□ 0.08
RAPGEF1-201ENST00000372189 PDCL2Q8N4E4 241 aa15.53■□□□□ 0.08
RAPGEF1-201ENST00000372189 GCP02774 474 aa15.52■□□□□ 0.08
RAPGEF1-201ENST00000372189 PI4KAP2A4QPH2 592 aa15.52■□□□□ 0.08
RAPGEF1-201ENST00000372189 PI4KAP1Q8N8J0 262 aa15.52■□□□□ 0.08
RAPGEF1-201ENST00000372189 TCHPQ9BT92 498 aa15.52■□□□□ 0.08
RAPGEF1-201ENST00000372189 ZRANB1Q9UGI0 708 aa15.52■□□□□ 0.08
RAPGEF1-201ENST00000372189 MAST1Q9Y2H9 1570 aa15.52■□□□□ 0.08
RAPGEF1-201ENST00000372189 ENOX2Q16206 610 aaKnown RBP15.52■□□□□ 0.08
RAPGEF1-201ENST00000372189 ZFYVE16Q7Z3T8 1539 aa15.52■□□□□ 0.08
RAPGEF1-201ENST00000372189 UBE3BQ7Z3V4 1068 aa15.52■□□□□ 0.07
RAPGEF1-201ENST00000372189 ODF2Q5BJF6 829 aa15.52■□□□□ 0.07
RAPGEF1-201ENST00000372189 PPFIBP1Q86W92 1011 aa15.52■□□□□ 0.07
RAPGEF1-201ENST00000372189 NEO1Q92859 1461 aa15.51■□□□□ 0.07
RAPGEF1-201ENST00000372189 KRI1Q8N9T8 703 aaKnown RBP15.51■□□□□ 0.07
RAPGEF1-201ENST00000372189 PIBF1Q8WXW3 757 aa15.51■□□□□ 0.07
RAPGEF1-201ENST00000372189 ZNHIT6Q9NWK9 470 aaKnown RBP15.51■□□□□ 0.07
RAPGEF1-201ENST00000372189 CFAP74Q9C0B2 1584 aa15.51■□□□□ 0.07
RAPGEF1-201ENST00000372189 LARP1BQ659C4 914 aaKnown RBP15.51■□□□□ 0.07
RAPGEF1-201ENST00000372189 SLC39A6Q13433 755 aa15.51■□□□□ 0.07
RAPGEF1-201ENST00000372189 SEPT14Q6ZU15 432 aa15.51■□□□□ 0.07
RAPGEF1-201ENST00000372189 NUP62CLQ9H1M0 184 aa15.51■□□□□ 0.07
RAPGEF1-201ENST00000372189 ZNF444Q8N0Y2 327 aaPredicted RBP15.5■□□□□ 0.07
RAPGEF1-201ENST00000372189 SEC63Q9UGP8 760 aaKnown RBP15.5■□□□□ 0.07
RAPGEF1-201ENST00000372189 DNMT1P26358 1616 aaKnown RBP15.5■□□□□ 0.07
RAPGEF1-201ENST00000372189 TTF1Q15361 905 aaPredicted RBP15.5■□□□□ 0.07
RAPGEF1-201ENST00000372189 TICAM2Q86XR7 235 aa15.5■□□□□ 0.07
RAPGEF1-201ENST00000372189 BTG4Q9NY30 223 aa15.5■□□□□ 0.07
RAPGEF1-201ENST00000372189 BRPF1P55201 1214 aaPredicted RBP15.5■□□□□ 0.07
RAPGEF1-201ENST00000372189 MPNDQ8N594 471 aa15.5■□□□□ 0.07
RAPGEF1-201ENST00000372189 ME1P48163 572 aa15.5■□□□□ 0.07
RAPGEF1-201ENST00000372189 CHPF2Q9P2E5 772 aa15.5■□□□□ 0.07
RAPGEF1-201ENST00000372189 NBPF14Q5TI25 921 aa15.5■□□□□ 0.07
RAPGEF1-201ENST00000372189 LDHCP07864 332 aa15.49■□□□□ 0.07
RAPGEF1-201ENST00000372189 ZHX3Q9H4I2 956 aa15.49■□□□□ 0.07
RAPGEF1-201ENST00000372189 CASTP20810 708 aaKnown RBP15.49■□□□□ 0.07
RAPGEF1-201ENST00000372189 SPATA32Q96LK8 384 aa15.49■□□□□ 0.07
RAPGEF1-201ENST00000372189 SPTY2D1Q68D10 685 aaPredicted RBP15.49■□□□□ 0.07
RAPGEF1-201ENST00000372189 CALCOCO1Q9P1Z2 691 aa15.49■□□□□ 0.07
RAPGEF1-201ENST00000372189 PCDH11XQ9BZA7 1347 aa15.49■□□□□ 0.07
RAPGEF1-201ENST00000372189 PCDH11YQ9BZA8 1340 aa15.49■□□□□ 0.07
RAPGEF1-201ENST00000372189 CEP57L1Q8IYX8 460 aa15.48■□□□□ 0.07
RAPGEF1-201ENST00000372189 XAGE3Q8WTP9 111 aa15.48■□□□□ 0.07
RAPGEF1-201ENST00000372189 TRIM27P14373 513 aa15.48■□□□□ 0.07
RAPGEF1-201ENST00000372189 WDR66Q8TBY9 1149 aa15.48■□□□□ 0.07
RAPGEF1-201ENST00000372189 CPSF2Q9P2I0 782 aaKnown RBP15.48■□□□□ 0.07
RAPGEF1-201ENST00000372189 POLKQ9UBT6 870 aa15.48■□□□□ 0.07
RAPGEF1-201ENST00000372189 CFAP45Q9UL16 551 aa15.48■□□□□ 0.07
RAPGEF1-201ENST00000372189 ANXA1P04083 346 aa15.48■□□□□ 0.07
RAPGEF1-201ENST00000372189 SIRT1Q96EB6 747 aa15.48■□□□□ 0.07
RAPGEF1-201ENST00000372189 TFCP2L1Q9NZI6 479 aa15.48■□□□□ 0.07
RAPGEF1-201ENST00000372189 ERLIN2O94905 339 aa15.47■□□□□ 0.07
RAPGEF1-201ENST00000372189 ANKRD18AQ8IVF6 992 aa15.47■□□□□ 0.07
RAPGEF1-201ENST00000372189 TXLNBQ8N3L3 684 aa15.47■□□□□ 0.07
RAPGEF1-201ENST00000372189 NYXQ9GZU5 481 aa15.47■□□□□ 0.07
RAPGEF1-201ENST00000372189 RTCBQ9Y3I0 505 aaKnown RBP15.47■□□□□ 0.07
RAPGEF1-201ENST00000372189 POLD1P28340 1107 aa15.47■□□□□ 0.07
RAPGEF1-201ENST00000372189 CDCA7Q9BWT1 371 aaPredicted RBP15.47■□□□□ 0.07
RAPGEF1-201ENST00000372189 SYCE3A1L190 88 aa15.47■□□□□ 0.07
RAPGEF1-201ENST00000372189 HOXC9P31274 260 aa15.47■□□□□ 0.07
RAPGEF1-201ENST00000372189 PRPF40BQ6NWY9 871 aaKnown RBP15.47■□□□□ 0.07
RAPGEF1-201ENST00000372189 IP6K1Q92551 441 aa15.47■□□□□ 0.07
RAPGEF1-201ENST00000372189 RNF41Q9H4P4 317 aaPredicted RBP15.47■□□□□ 0.07
RAPGEF1-201ENST00000372189 RANBP6O60518 1105 aaKnown RBP15.47■□□□□ 0.07
RAPGEF1-201ENST00000372189 COPS6Q7L5N1 327 aa15.47■□□□□ 0.07
RAPGEF1-201ENST00000372189 JARID2Q92833 1246 aaPredicted RBP15.47■□□□□ 0.07
RAPGEF1-201ENST00000372189 NIP7Q9Y221 180 aaKnown RBP eCLIP15.47■□□□□ 0.07
RAPGEF1-201ENST00000372189 BAG3O95817 575 aa15.46■□□□□ 0.07
RAPGEF1-201ENST00000372189 MTHFSDQ2M296 383 aaKnown RBP15.46■□□□□ 0.07
RAPGEF1-201ENST00000372189 DCAF5Q96JK2 942 aa15.46■□□□□ 0.07
RAPGEF1-201ENST00000372189 NLRP3Q96P20 1036 aa15.46■□□□□ 0.07
RAPGEF1-201ENST00000372189 CGNQ9P2M7 1197 aaKnown RBP15.46■□□□□ 0.07
RAPGEF1-201ENST00000372189 KIF2AO00139 706 aaPredicted RBP15.46■□□□□ 0.07
RAPGEF1-201ENST00000372189 SEPT6Q14141 434 aa15.46■□□□□ 0.07
RAPGEF1-201ENST00000372189 UTP14AQ9BVJ6 771 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms