RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 NKX1-1Q15270 411 aaPredicted RBP24.32■■□□□ 1.48
LHX3-202ENST00000371748 ERC2O15083 957 aa24.31■■□□□ 1.48
LHX3-202ENST00000371748 HSP90AB4PQ58FF6 505 aa24.31■■□□□ 1.48
LHX3-202ENST00000371748 UNC5CLQ8IV45 518 aa24.31■■□□□ 1.48
LHX3-202ENST00000371748 BICC1Q9H694 974 aaKnown RBP24.31■■□□□ 1.48
LHX3-202ENST00000371748 BTG4Q9NY30 223 aa24.31■■□□□ 1.48
LHX3-202ENST00000371748 UBR2Q8IWV8 1755 aa24.31■■□□□ 1.48
LHX3-202ENST00000371748 AOX1Q06278 1338 aa24.3■■□□□ 1.48
LHX3-202ENST00000371748 ARFGEF2Q9Y6D5 1785 aa24.3■■□□□ 1.48
LHX3-202ENST00000371748 ROBO1Q9Y6N7 1651 aa24.3■■□□□ 1.48
LHX3-202ENST00000371748 REC8O95072 547 aa24.3■■□□□ 1.48
LHX3-202ENST00000371748 GCKRQ14397 625 aa24.3■■□□□ 1.48
LHX3-202ENST00000371748 AFDNP55196 1824 aaKnown RBP24.3■■□□□ 1.48
LHX3-202ENST00000371748 AK9Q5TCS8 1911 aa24.28■■□□□ 1.48
LHX3-202ENST00000371748 PAPPAQ13219 1627 aa24.28■■□□□ 1.48
LHX3-202ENST00000371748 KCPQ6ZWJ8 1503 aa24.28■■□□□ 1.48
LHX3-202ENST00000371748 PTCD1O75127 700 aaKnown RBP24.28■■□□□ 1.48
LHX3-202ENST00000371748 PI4K2BQ8TCG2 481 aa24.28■■□□□ 1.48
LHX3-202ENST00000371748 TOGARAM1Q9Y4F4 1720 aa24.28■■□□□ 1.48
LHX3-202ENST00000371748 MAP4K4O95819 1239 aaPredicted RBP24.27■■□□□ 1.48
LHX3-202ENST00000371748 NBPF26B4DH59 902 aa24.27■■□□□ 1.48
LHX3-202ENST00000371748 CHMLP26374 656 aa24.27■■□□□ 1.48
LHX3-202ENST00000371748 NBPF14Q5TI25 921 aa24.27■■□□□ 1.48
LHX3-202ENST00000371748 NBPF10Q6P3W6 841 aaKnown RBP24.27■■□□□ 1.48
LHX3-202ENST00000371748 NBPF15Q8N660 670 aa24.27■■□□□ 1.48
LHX3-202ENST00000371748 JARID2Q92833 1246 aaPredicted RBP24.27■■□□□ 1.48
LHX3-202ENST00000371748 ESYT1Q9BSJ8 1104 aa24.27■■□□□ 1.48
LHX3-202ENST00000371748 FAM43AQ8N2R8 423 aa24.25■■□□□ 1.47
LHX3-202ENST00000371748 RABEP1Q15276 862 aa24.25■■□□□ 1.47
LHX3-202ENST00000371748 ATP5J2-PTCD1G3V325 749 aa24.24■■□□□ 1.47
LHX3-202ENST00000371748 EPHA10Q5JZY3 1008 aa24.24■■□□□ 1.47
LHX3-202ENST00000371748 K7ELQ4 463 aaPredicted RBP24.24■■□□□ 1.47
LHX3-202ENST00000371748 CLASRPQ8N2M8 674 aaKnown RBP24.24■■□□□ 1.47
LHX3-202ENST00000371748 CHMP5Q9NZZ3 219 aa24.24■■□□□ 1.47
LHX3-202ENST00000371748 A1BGP04217 495 aa24.23■■□□□ 1.47
LHX3-202ENST00000371748 PLBD2Q8NHP8 589 aa24.23■■□□□ 1.47
LHX3-202ENST00000371748 ERC1Q8IUD2 1116 aa24.22■■□□□ 1.47
LHX3-202ENST00000371748 COL14A1Q05707 1796 aaKnown RBP24.22■■□□□ 1.47
LHX3-202ENST00000371748 ERBB4Q15303 1308 aa24.22■■□□□ 1.47
LHX3-202ENST00000371748 KLHDC4Q8TBB5 520 aa24.22■■□□□ 1.47
LHX3-202ENST00000371748 TTLL7Q6ZT98 887 aa24.21■■□□□ 1.47
LHX3-202ENST00000371748 SIL1Q9H173 461 aa24.21■■□□□ 1.47
LHX3-202ENST00000371748 FOXD4L1Q9NU39 408 aa24.21■■□□□ 1.47
LHX3-202ENST00000371748 TMOD3Q9NYL9 352 aa24.21■■□□□ 1.47
LHX3-202ENST00000371748 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.21■■□□□ 1.47
LHX3-202ENST00000371748 TNS2Q63HR2 1409 aa24.21■■□□□ 1.47
LHX3-202ENST00000371748 G3BP1Q13283 466 aaKnown RBP eCLIP24.21■■□□□ 1.47
LHX3-202ENST00000371748 UBE3BQ7Z3V4 1068 aa24.21■■□□□ 1.47
LHX3-202ENST00000371748 SASH1O94885 1247 aa24.2■■□□□ 1.46
LHX3-202ENST00000371748 USP42Q9H9J4 1324 aaKnown RBP24.2■■□□□ 1.46
LHX3-202ENST00000371748 DDIT3P35638 169 aa24.2■■□□□ 1.46
LHX3-202ENST00000371748 AHDC1Q5TGY3 1603 aaPredicted RBP24.19■■□□□ 1.46
LHX3-202ENST00000371748 TTC41PQ6P2S7 1318 aa24.19■■□□□ 1.46
LHX3-202ENST00000371748 COL16A1Q07092 1604 aaPredicted RBP24.19■■□□□ 1.46
LHX3-202ENST00000371748 HSP90AA1P07900 732 aaKnown RBP24.19■■□□□ 1.46
LHX3-202ENST00000371748 IL25Q9H293 177 aa24.19■■□□□ 1.46
LHX3-202ENST00000371748 ANO2Q9NQ90 1003 aa24.19■■□□□ 1.46
LHX3-202ENST00000371748 A0A087WZG4 1122 aa24.18■■□□□ 1.46
LHX3-202ENST00000371748 IFIT2P09913 472 aaKnown RBP24.18■■□□□ 1.46
LHX3-202ENST00000371748 AACSQ86V21 672 aa24.18■■□□□ 1.46
LHX3-202ENST00000371748 NUP188Q5SRE5 1749 aa24.18■■□□□ 1.46
LHX3-202ENST00000371748 CNTROBQ8N137 903 aa24.17■■□□□ 1.46
LHX3-202ENST00000371748 COL22A1Q8NFW1 1626 aaPredicted RBP24.17■■□□□ 1.46
LHX3-202ENST00000371748 GLRX3O76003 335 aaKnown RBP24.17■■□□□ 1.46
LHX3-202ENST00000371748 KAT6BQ8WYB5 2073 aa24.17■■□□□ 1.46
LHX3-202ENST00000371748 ITGB4P16144 1822 aa24.16■■□□□ 1.46
LHX3-202ENST00000371748 PIGBQ92521 554 aa24.16■■□□□ 1.46
LHX3-202ENST00000371748 ECHDC1Q9NTX5 307 aa24.16■■□□□ 1.46
LHX3-202ENST00000371748 ASAP1Q9ULH1 1129 aa24.16■■□□□ 1.46
LHX3-202ENST00000371748 EAF2Q96CJ1 260 aaPredicted RBP24.15■■□□□ 1.46
LHX3-202ENST00000371748 ZBTB3Q9H5J0 574 aa24.15■■□□□ 1.46
LHX3-202ENST00000371748 DISP2A7MBM2 1401 aa24.15■■□□□ 1.46
LHX3-202ENST00000371748 L1TD1Q5T7N2 865 aaKnown RBP24.14■■□□□ 1.46
LHX3-202ENST00000371748 CCDC8Q9H0W5 538 aaPredicted RBP24.14■■□□□ 1.46
LHX3-202ENST00000371748 CASP7P55210 303 aa24.14■■□□□ 1.45
LHX3-202ENST00000371748 GPATCH3Q96I76 525 aa24.14■■□□□ 1.45
LHX3-202ENST00000371748 PALD1Q9ULE6 856 aa24.14■■□□□ 1.45
LHX3-202ENST00000371748 LTBP4Q8N2S1 1624 aa24.13■■□□□ 1.45
LHX3-202ENST00000371748 RFX5P48382 616 aaPredicted RBP24.13■■□□□ 1.45
LHX3-202ENST00000371748 TLR7Q9NYK1 1049 aaKnown RBP24.13■■□□□ 1.45
LHX3-202ENST00000371748 ST18O60284 1047 aa24.12■■□□□ 1.45
LHX3-202ENST00000371748 MCCP23508 829 aa24.12■■□□□ 1.45
LHX3-202ENST00000371748 RABL6Q3YEC7 729 aaPredicted RBP24.12■■□□□ 1.45
LHX3-202ENST00000371748 ZNF330Q9Y3S2 320 aaPredicted RBP24.11■■□□□ 1.45
LHX3-202ENST00000371748 MCM4P33991 863 aa24.11■■□□□ 1.45
LHX3-202ENST00000371748 PTPN12Q05209 780 aaKnown RBP24.11■■□□□ 1.45
LHX3-202ENST00000371748 COPRSQ9NQ92 184 aa24.11■■□□□ 1.45
LHX3-202ENST00000371748 ATG3Q9NT62 314 aa24.11■■□□□ 1.45
LHX3-202ENST00000371748 TJP1Q07157 1748 aa24.11■■□□□ 1.45
LHX3-202ENST00000371748 COL15A1P39059 1388 aa24.11■■□□□ 1.45
LHX3-202ENST00000371748 PLCH1Q4KWH8 1693 aa24.11■■□□□ 1.45
LHX3-202ENST00000371748 DNAJC10Q8IXB1 793 aa24.1■■□□□ 1.45
LHX3-202ENST00000371748 CWC25Q9NXE8 425 aaPredicted RBP24.1■■□□□ 1.45
LHX3-202ENST00000371748 SGSM2O43147 1006 aa24.1■■□□□ 1.45
LHX3-202ENST00000371748 ADAMTS2O95450 1211 aa24.1■■□□□ 1.45
LHX3-202ENST00000371748 CIZ1Q9ULV3 898 aaPredicted RBP24.1■■□□□ 1.45
LHX3-202ENST00000371748 H7C1W4 665 aa24.09■■□□□ 1.45
LHX3-202ENST00000371748 CWC27Q6UX04 472 aaKnown RBP24.09■■□□□ 1.45
LHX3-202ENST00000371748 PHLPP1O60346 1717 aa24.09■■□□□ 1.45
LHX3-202ENST00000371748 LMBR1LQ6UX01 489 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms