RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 SUCLG2Q96I99 432 aa35.15■■■■□ 3.22
SSBP3-204ENST00000371320 SGSM2O43147 1006 aa35.15■■■■□ 3.22
SSBP3-204ENST00000371320 LARP1Q6PKG0 1096 aaKnown RBP35.15■■■■□ 3.22
SSBP3-204ENST00000371320 AK9Q5TCS8 1911 aa35.14■■■■□ 3.22
SSBP3-204ENST00000371320 MYL6BP14649 208 aa35.13■■■■□ 3.22
SSBP3-204ENST00000371320 HSPA4P34932 840 aa35.13■■■■□ 3.22
SSBP3-204ENST00000371320 ABCC6O95255 1503 aa35.13■■■■□ 3.21
SSBP3-204ENST00000371320 DCAF5Q96JK2 942 aa35.13■■■■□ 3.21
SSBP3-204ENST00000371320 GPATCH3Q96I76 525 aa35.12■■■■□ 3.21
SSBP3-204ENST00000371320 ZNF496Q96IT1 587 aaPredicted RBP35.12■■■■□ 3.21
SSBP3-204ENST00000371320 BICC1Q9H694 974 aaKnown RBP35.12■■■■□ 3.21
SSBP3-204ENST00000371320 NEXNQ0ZGT2 675 aa35.12■■■■□ 3.21
SSBP3-204ENST00000371320 MCTP1Q6DN14 999 aa35.12■■■■□ 3.21
SSBP3-204ENST00000371320 KAZALD1Q96I82 304 aa35.12■■■■□ 3.21
SSBP3-204ENST00000371320 IGKV5-2P06315 115 aa35.11■■■■□ 3.21
SSBP3-204ENST00000371320 IFIT2P09913 472 aaKnown RBP35.11■■■■□ 3.21
SSBP3-204ENST00000371320 ECHDC1Q9NTX5 307 aa35.11■■■■□ 3.21
SSBP3-204ENST00000371320 SPATA31A3Q5VYP0 1347 aa35.11■■■■□ 3.21
SSBP3-204ENST00000371320 PLEKHG2Q9H7P9 1386 aa35.11■■■■□ 3.21
SSBP3-204ENST00000371320 TTC5Q8N0Z6 440 aa35.1■■■■□ 3.21
SSBP3-204ENST00000371320 XAGE3Q8WTP9 111 aa35.1■■■■□ 3.21
SSBP3-204ENST00000371320 CYP27B1O15528 508 aa35.1■■■■□ 3.21
SSBP3-204ENST00000371320 CUL4AQ13619 759 aa35.1■■■■□ 3.21
SSBP3-204ENST00000371320 RAD50Q92878 1312 aa35.1■■■■□ 3.21
SSBP3-204ENST00000371320 DDX49Q9Y6V7 483 aaKnown RBP35.09■■■■□ 3.21
SSBP3-204ENST00000371320 KLHL40Q2TBA0 621 aa35.09■■■■□ 3.21
SSBP3-204ENST00000371320 COPS6Q7L5N1 327 aa35.09■■■■□ 3.21
SSBP3-204ENST00000371320 UPF3BQ9BZI7 483 aaKnown RBP35.09■■■■□ 3.21
SSBP3-204ENST00000371320 GRPEL1Q9HAV7 217 aa35.09■■■■□ 3.21
SSBP3-204ENST00000371320 ZDHHC9Q9Y397 364 aa35.09■■■■□ 3.21
SSBP3-204ENST00000371320 CRYBG1Q9Y4K1 1723 aa35.08■■■■□ 3.21
SSBP3-204ENST00000371320 C5P01031 1676 aa35.08■■■■□ 3.21
SSBP3-204ENST00000371320 SNRPA1P09661 255 aaKnown RBP35.08■■■■□ 3.21
SSBP3-204ENST00000371320 G3BP1Q13283 466 aaKnown RBP eCLIP35.07■■■■□ 3.21
SSBP3-204ENST00000371320 CWC27Q6UX04 472 aaKnown RBP35.07■■■■□ 3.21
SSBP3-204ENST00000371320 KIAA1211Q6ZU35 1233 aa35.07■■■■□ 3.2
SSBP3-204ENST00000371320 AACSQ86V21 672 aa35.07■■■■□ 3.2
SSBP3-204ENST00000371320 PANK2Q9BZ23 570 aa35.07■■■■□ 3.2
SSBP3-204ENST00000371320 LSG1Q9H089 658 aaKnown RBP35.07■■■■□ 3.2
SSBP3-204ENST00000371320 NEURL1BA8MQ27 555 aa35.06■■■■□ 3.2
SSBP3-204ENST00000371320 NOL8Q76FK4 1167 aaKnown RBP35.06■■■■□ 3.2
SSBP3-204ENST00000371320 INTS4Q96HW7 963 aaKnown RBP35.05■■■■□ 3.2
SSBP3-204ENST00000371320 METTL22Q9BUU2 404 aaPredicted RBP35.05■■■■□ 3.2
SSBP3-204ENST00000371320 DIAPH3Q9NSV4 1193 aa35.05■■■■□ 3.2
SSBP3-204ENST00000371320 USP16Q9Y5T5 823 aa35.05■■■■□ 3.2
SSBP3-204ENST00000371320 CPDO75976 1380 aa35.05■■■■□ 3.2
SSBP3-204ENST00000371320 FMNL2Q96PY5 1086 aa35.04■■■■□ 3.2
SSBP3-204ENST00000371320 MYD88Q99836 296 aa35.04■■■■□ 3.2
SSBP3-204ENST00000371320 MRC1P22897 1456 aa35.04■■■■□ 3.2
SSBP3-204ENST00000371320 GCKRQ14397 625 aa35.04■■■■□ 3.2
SSBP3-204ENST00000371320 RUFY2Q8WXA3 655 aa35.03■■■■□ 3.2
SSBP3-204ENST00000371320 SASH1O94885 1247 aa35.02■■■■□ 3.2
SSBP3-204ENST00000371320 CABP4P57796 275 aa35.02■■■■□ 3.2
SSBP3-204ENST00000371320 ANKRD13DQ6ZTN6 518 aa35.02■■■■□ 3.2
SSBP3-204ENST00000371320 LMBRD1Q9NUN5 540 aa35.02■■■■□ 3.2
SSBP3-204ENST00000371320 GAS2L3Q86XJ1 694 aa35.01■■■■□ 3.2
SSBP3-204ENST00000371320 SNX14Q9Y5W7 946 aa35.01■■■■□ 3.2
SSBP3-204ENST00000371320 FAM43AQ8N2R8 423 aa35.01■■■■□ 3.19
SSBP3-204ENST00000371320 LRP10Q7Z4F1 713 aa35■■■■□ 3.19
SSBP3-204ENST00000371320 EVI5LQ96CN4 794 aa34.99■■■■□ 3.19
SSBP3-204ENST00000371320 EAF2Q96CJ1 260 aaPredicted RBP34.98■■■■□ 3.19
SSBP3-204ENST00000371320 PKD1L3Q7Z443 1732 aa34.98■■■■□ 3.19
SSBP3-204ENST00000371320 SIL1Q9H173 461 aa34.97■■■■□ 3.19
SSBP3-204ENST00000371320 PIP4K2AP48426 406 aaPredicted RBP34.97■■■■□ 3.19
SSBP3-204ENST00000371320 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP34.96■■■■□ 3.19
SSBP3-204ENST00000371320 RASEFQ8IZ41 740 aa34.96■■■■□ 3.19
SSBP3-204ENST00000371320 CCDC8Q9H0W5 538 aaPredicted RBP34.96■■■■□ 3.19
SSBP3-204ENST00000371320 BRD1O95696 1058 aa34.95■■■■□ 3.19
SSBP3-204ENST00000371320 BRINP3Q76B58 766 aa34.95■■■■□ 3.19
SSBP3-204ENST00000371320 PRPF40AO75400 957 aaKnown RBP34.94■■■■□ 3.18
SSBP3-204ENST00000371320 NCLP19338 710 aaKnown RBP34.94■■■■□ 3.18
SSBP3-204ENST00000371320 EPHA10Q5JZY3 1008 aa34.94■■■■□ 3.18
SSBP3-204ENST00000371320 FOXD4L5Q5VV16 416 aaPredicted RBP34.94■■■■□ 3.18
SSBP3-204ENST00000371320 FOXD4L4Q8WXT5 416 aaPredicted RBP34.94■■■■□ 3.18
SSBP3-204ENST00000371320 KLHDC4Q8TBB5 520 aa34.93■■■■□ 3.18
SSBP3-204ENST00000371320 STRCQ7RTU9 1775 aa34.93■■■■□ 3.18
SSBP3-204ENST00000371320 TTC14Q96N46 770 aa34.91■■■■□ 3.18
SSBP3-204ENST00000371320 PRDM11Q9NQV5 511 aa34.91■■■■□ 3.18
SSBP3-204ENST00000371320 TLR7Q9NYK1 1049 aaKnown RBP34.91■■■■□ 3.18
SSBP3-204ENST00000371320 PTH1RQ03431 593 aa34.9■■■■□ 3.18
SSBP3-204ENST00000371320 HIP1O00291 1037 aa34.9■■■■□ 3.18
SSBP3-204ENST00000371320 CAVIN1Q6NZI2 390 aaKnown RBP34.9■■■■□ 3.18
SSBP3-204ENST00000371320 WDR17Q8IZU2 1322 aa34.89■■■■□ 3.18
SSBP3-204ENST00000371320 TOM1L2Q6ZVM7 507 aa34.88■■■■□ 3.17
SSBP3-204ENST00000371320 JARID2Q92833 1246 aaPredicted RBP34.88■■■■□ 3.17
SSBP3-204ENST00000371320 CHAMP1Q96JM3 812 aa34.88■■■■□ 3.17
SSBP3-204ENST00000371320 AK2P54819 239 aa34.87■■■■□ 3.17
SSBP3-204ENST00000371320 UBE3BQ7Z3V4 1068 aa34.87■■■■□ 3.17
SSBP3-204ENST00000371320 ZCRB1Q8TBF4 217 aaKnown RBP34.87■■■■□ 3.17
SSBP3-204ENST00000371320 COPRSQ9NQ92 184 aa34.87■■■■□ 3.17
SSBP3-204ENST00000371320 PCDH11XQ9BZA7 1347 aa34.87■■■■□ 3.17
SSBP3-204ENST00000371320 PCDH11YQ9BZA8 1340 aa34.87■■■■□ 3.17
SSBP3-204ENST00000371320 PLBD2Q8NHP8 589 aa34.86■■■■□ 3.17
SSBP3-204ENST00000371320 BOLA2Q9H3K6 86 aa34.86■■■■□ 3.17
SSBP3-204ENST00000371320 ATP5J2-PTCD1G3V325 749 aa34.85■■■■□ 3.17
SSBP3-204ENST00000371320 PTCD1O75127 700 aaKnown RBP34.85■■■■□ 3.17
SSBP3-204ENST00000371320 CASTP20810 708 aaKnown RBP34.85■■■■□ 3.17
SSBP3-204ENST00000371320 PRPF40BQ6NWY9 871 aaKnown RBP34.85■■■■□ 3.17
SSBP3-204ENST00000371320 LIMCH1Q9UPQ0 1083 aa34.85■■■■□ 3.17
SSBP3-204ENST00000371320 ZNF445P59923 1031 aa34.85■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms