RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 SYT10Q6XYQ8 523 aa10.42□□□□□ -0.74
SMARCA1-203ENST00000371123 EP400NLQ6ZTU2 488 aa10.42□□□□□ -0.74
SMARCA1-203ENST00000371123 NUTM1Q86Y26 1132 aa10.42□□□□□ -0.74
SMARCA1-203ENST00000371123 LOC102724159A0A0B4J2E5 919 aa10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 DNM1Q05193 864 aaKnown RBP10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 PWP2Q15269 919 aaKnown RBP10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 MBIPQ9NS73 344 aa10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 TSPYL4Q9UJ04 414 aa10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 SASH3O75995 380 aa10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 CDK11BP21127 795 aaKnown RBP10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 STK3Q13188 491 aa10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 FAM173BQ6P4H8 233 aa10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 INTS4Q96HW7 963 aaKnown RBP10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 SLIT1O75093 1534 aa10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 ANKRD26Q9UPS8 1709 aa10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 ERC2O15083 957 aa10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 ZNF853P0CG23 659 aa10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 SYT1P21579 422 aa10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 CAMK4Q16566 473 aa10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 REXO1L1PQ8IX06 675 aa10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 ZNF397Q8NF99 534 aaPredicted RBP10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 TCEANC2Q96MN5 208 aa10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 SIL1Q9H173 461 aa10.41□□□□□ -0.74
SMARCA1-203ENST00000371123 HSP90B1P14625 803 aaKnown RBP10.4□□□□□ -0.74
SMARCA1-203ENST00000371123 SMARCE1Q969G3 411 aa10.4□□□□□ -0.74
SMARCA1-203ENST00000371123 CBX8Q9HC52 389 aa10.4□□□□□ -0.74
SMARCA1-203ENST00000371123 PPLO60437 1756 aa10.4□□□□□ -0.74
SMARCA1-203ENST00000371123 ARHGEF28Q8N1W1 1705 aaKnown RBP10.4□□□□□ -0.74
SMARCA1-203ENST00000371123 FAM135BQ49AJ0 1406 aa10.4□□□□□ -0.74
SMARCA1-203ENST00000371123 RUFY3Q7L099 469 aa10.4□□□□□ -0.74
SMARCA1-203ENST00000371123 ANKRD44Q8N8A2 993 aa10.4□□□□□ -0.74
SMARCA1-203ENST00000371123 TTC14Q96N46 770 aa10.4□□□□□ -0.74
SMARCA1-203ENST00000371123 ESYT1Q9BSJ8 1104 aa10.4□□□□□ -0.74
SMARCA1-203ENST00000371123 EPC1Q9H2F5 836 aa10.4□□□□□ -0.74
SMARCA1-203ENST00000371123 KCNG1Q9UIX4 513 aa10.4□□□□□ -0.74
SMARCA1-203ENST00000371123 ARHGAP23Q9P227 1491 aa10.4□□□□□ -0.74
SMARCA1-203ENST00000371123 ZRANB2O95218 330 aaKnown RBP eCLIP10.4□□□□□ -0.74
SMARCA1-203ENST00000371123 CREBRFQ8IUR6 639 aa10.4□□□□□ -0.74
SMARCA1-203ENST00000371123 RSPH14Q9UHP6 348 aa10.4□□□□□ -0.74
SMARCA1-203ENST00000371123 MSH6P52701 1360 aa10.4□□□□□ -0.75
SMARCA1-203ENST00000371123 CLCN6P51797 869 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 UBE2HP62256 183 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 ERCC6LQ2NKX8 1250 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 RASEFQ8IZ41 740 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 ARHGAP45Q92619 1136 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 MEIS3Q99687 375 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 DHX16O60231 1041 aaKnown RBP10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 MMP14P50281 582 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 ZNF75DP51815 510 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 CCZ1BP86790 482 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 CCZ1P86791 482 aaPredicted RBP10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 CDC42BPGQ6DT37 1551 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 MYO5BQ9ULV0 1848 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 A0A1W2PP64 1363 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 PNPLA6Q8IY17 1366 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 KIAA0232Q92628 1395 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 PDE1AP54750 535 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 STRCQ7RTU9 1775 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 SURF6O75683 361 aaKnown RBP10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 ZSCAN22P10073 491 aaPredicted RBP10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 CCDC93Q567U6 631 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 CEP135Q66GS9 1140 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 FOXR1Q6PIV2 292 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 IFT57Q9NWB7 429 aa10.39□□□□□ -0.75
SMARCA1-203ENST00000371123 CEP170BQ9Y4F5 1589 aaPredicted RBP10.38□□□□□ -0.75
SMARCA1-203ENST00000371123 RAD50Q92878 1312 aa10.38□□□□□ -0.75
SMARCA1-203ENST00000371123 KIF1BO60333 1816 aa10.38□□□□□ -0.75
SMARCA1-203ENST00000371123 PNMA6AP0CW24 399 aaPredicted RBP10.38□□□□□ -0.75
SMARCA1-203ENST00000371123 TTC6Q86TZ1 520 aa10.38□□□□□ -0.75
SMARCA1-203ENST00000371123 SETBP1Q9Y6X0 1596 aa10.38□□□□□ -0.75
SMARCA1-203ENST00000371123 SEC31AO94979 1220 aaKnown RBP10.38□□□□□ -0.75
SMARCA1-203ENST00000371123 CKAP2LQ8IYA6 745 aa10.38□□□□□ -0.75
SMARCA1-203ENST00000371123 CCDC66A2RUB6 948 aa10.38□□□□□ -0.75
SMARCA1-203ENST00000371123 FOXO3O43524 673 aa10.38□□□□□ -0.75
SMARCA1-203ENST00000371123 CCDC112Q8NEF3 446 aa10.38□□□□□ -0.75
SMARCA1-203ENST00000371123 CALCOCO1Q9P1Z2 691 aa10.38□□□□□ -0.75
SMARCA1-203ENST00000371123 ADCY9O60503 1353 aa10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 F13A1P00488 732 aa10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 MCCP23508 829 aa10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 CHMLP26374 656 aa10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 HAP1P54257 671 aaPredicted RBP10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 BMS1Q14692 1282 aaKnown RBP10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 CCDC85AQ96PX6 553 aaPredicted RBP10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 MTMR6Q9Y217 621 aa10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 TYRO3Q06418 890 aa10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 IDI1Q13907 227 aa10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 SYAP1Q96A49 352 aaPredicted RBP10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 ANO6Q4KMQ2 910 aa10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 NBPF6Q5VWK0 638 aa10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 LRRC8AQ8IWT6 810 aa10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 NBPF4Q96M43 638 aa10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 FMNL2Q96PY5 1086 aa10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 NOL10Q9BSC4 688 aaKnown RBP10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 OSBPL3Q9H4L5 887 aa10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 TRMT1Q9NXH9 659 aaKnown RBP10.37□□□□□ -0.75
SMARCA1-203ENST00000371123 KDM4FA0A1W2PPD8 638 aa10.36□□□□□ -0.75
SMARCA1-203ENST00000371123 FYB1O15117 783 aa10.36□□□□□ -0.75
SMARCA1-203ENST00000371123 PIP4K2AP48426 406 aaPredicted RBP10.36□□□□□ -0.75
SMARCA1-203ENST00000371123 CFAP65Q6ZU64 1925 aaKnown RBP10.36□□□□□ -0.75
SMARCA1-203ENST00000371123 LMTK3Q96Q04 1460 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms