RNA–Protein interactions for RNA: ENST00000371118.1

ATG4C-202, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-202ENST00000371118 HCSTQ9UBK5 93 aa8.72□□□□□ -1.01
ATG4C-202ENST00000371118 TTC21AQ8NDW8 1320 aa8.72□□□□□ -1.01
ATG4C-202ENST00000371118 UBR3Q6ZT12 1888 aa8.72□□□□□ -1.01
ATG4C-202ENST00000371118 SBF1O95248 1867 aa8.71□□□□□ -1.01
ATG4C-202ENST00000371118 RIMBP2O15034 1052 aa8.71□□□□□ -1.02
ATG4C-202ENST00000371118 SOX10P56693 466 aa8.71□□□□□ -1.02
ATG4C-202ENST00000371118 DEFB115Q30KQ5 88 aa8.71□□□□□ -1.02
ATG4C-202ENST00000371118 PRPF38BQ5VTL8 546 aaKnown RBP8.71□□□□□ -1.02
ATG4C-202ENST00000371118 TMEM92Q6UXU6 159 aa8.71□□□□□ -1.02
ATG4C-202ENST00000371118 ANKRD13DQ6ZTN6 518 aa8.71□□□□□ -1.02
ATG4C-202ENST00000371118 NME9Q86XW9 330 aa8.71□□□□□ -1.02
ATG4C-202ENST00000371118 ABT1Q9ULW3 272 aaKnown RBP8.71□□□□□ -1.02
ATG4C-202ENST00000371118 CENPJQ9HC77 1338 aaPredicted RBP8.71□□□□□ -1.02
ATG4C-202ENST00000371118 KTN1Q86UP2 1357 aaKnown RBP8.71□□□□□ -1.02
ATG4C-202ENST00000371118 KIF13BQ9NQT8 1826 aa8.7□□□□□ -1.02
ATG4C-202ENST00000371118 ARFGEF1Q9Y6D6 1849 aa8.7□□□□□ -1.02
ATG4C-202ENST00000371118 LOC102724428A0A0B4J2F2 783 aa8.7□□□□□ -1.02
ATG4C-202ENST00000371118 ATP6V1AP38606 617 aa8.7□□□□□ -1.02
ATG4C-202ENST00000371118 SIK1P57059 783 aa8.7□□□□□ -1.02
ATG4C-202ENST00000371118 USHBP1Q8N6Y0 703 aa8.7□□□□□ -1.02
ATG4C-202ENST00000371118 IRX2Q9BZI1 471 aaPredicted RBP8.7□□□□□ -1.02
ATG4C-202ENST00000371118 WDR33Q9C0J8 1336 aaKnown RBP8.7□□□□□ -1.02
ATG4C-202ENST00000371118 ZC3H4Q9UPT8 1303 aaKnown RBP8.7□□□□□ -1.02
ATG4C-202ENST00000371118 LTN1O94822 1766 aa8.7□□□□□ -1.02
ATG4C-202ENST00000371118 RFC4P35249 363 aa8.69□□□□□ -1.02
ATG4C-202ENST00000371118 ITPK1Q13572 414 aa8.69□□□□□ -1.02
ATG4C-202ENST00000371118 DGKZQ13574 1117 aa8.69□□□□□ -1.02
ATG4C-202ENST00000371118 NBPF1Q3BBV0 1214 aa8.69□□□□□ -1.02
ATG4C-202ENST00000371118 RTCBQ9Y3I0 505 aaKnown RBP8.69□□□□□ -1.02
ATG4C-202ENST00000371118 BRCA1P38398 1863 aaKnown RBP8.68□□□□□ -1.02
ATG4C-202ENST00000371118 EAPPQ56P03 285 aaPredicted RBP8.68□□□□□ -1.02
ATG4C-202ENST00000371118 SMYD5Q6GMV2 418 aa8.68□□□□□ -1.02
ATG4C-202ENST00000371118 RAPGEF4Q8WZA2 1011 aa8.68□□□□□ -1.02
ATG4C-202ENST00000371118 PIGBQ92521 554 aa8.68□□□□□ -1.02
ATG4C-202ENST00000371118 IP6K1Q92551 441 aa8.68□□□□□ -1.02
ATG4C-202ENST00000371118 EMILIN3Q9NT22 766 aa8.68□□□□□ -1.02
ATG4C-202ENST00000371118 MEGF6O75095 1541 aa8.68□□□□□ -1.02
ATG4C-202ENST00000371118 DPYSL4O14531 572 aa8.67□□□□□ -1.02
ATG4C-202ENST00000371118 DDNO94850 711 aaPredicted RBP8.67□□□□□ -1.02
ATG4C-202ENST00000371118 GYS1P13807 737 aa8.67□□□□□ -1.02
ATG4C-202ENST00000371118 ERFEQ4G0M1 354 aa8.67□□□□□ -1.02
ATG4C-202ENST00000371118 PASKQ96RG2 1323 aa8.67□□□□□ -1.02
ATG4C-202ENST00000371118 VIRMAQ69YN4 1812 aaKnown RBP8.66□□□□□ -1.02
ATG4C-202ENST00000371118 C4AP0C0L4 1744 aa8.66□□□□□ -1.02
ATG4C-202ENST00000371118 EVC2Q86UK5 1308 aa8.66□□□□□ -1.02
ATG4C-202ENST00000371118 RGS20O76081 388 aa8.66□□□□□ -1.02
ATG4C-202ENST00000371118 TATP17735 454 aaPredicted RBP8.66□□□□□ -1.02
ATG4C-202ENST00000371118 AMPHP49418 695 aa8.66□□□□□ -1.02
ATG4C-202ENST00000371118 RASSF10A6NK89 507 aa8.65□□□□□ -1.02
ATG4C-202ENST00000371118 MAP3K9P80192 1104 aa8.65□□□□□ -1.02
ATG4C-202ENST00000371118 LDHDQ86WU2 507 aa8.65□□□□□ -1.02
ATG4C-202ENST00000371118 GPR101Q96P66 508 aaPredicted RBP8.65□□□□□ -1.02
ATG4C-202ENST00000371118 ASAP1Q9ULH1 1129 aa8.65□□□□□ -1.02
ATG4C-202ENST00000371118 CCDC88AQ3V6T2 1871 aa8.65□□□□□ -1.02
ATG4C-202ENST00000371118 TIAM2Q8IVF5 1701 aa8.65□□□□□ -1.03
ATG4C-202ENST00000371118 PCDH11XQ9BZA7 1347 aa8.64□□□□□ -1.03
ATG4C-202ENST00000371118 PCDH11YQ9BZA8 1340 aa8.64□□□□□ -1.03
ATG4C-202ENST00000371118 TBC1D12O60347 775 aa8.64□□□□□ -1.03
ATG4C-202ENST00000371118 ITGBL1O95965 494 aaPredicted RBP8.64□□□□□ -1.03
ATG4C-202ENST00000371118 FBLN1P23142 703 aa8.64□□□□□ -1.03
ATG4C-202ENST00000371118 NBPF6Q5VWK0 638 aa8.64□□□□□ -1.03
ATG4C-202ENST00000371118 CYP4F22Q6NT55 531 aa8.64□□□□□ -1.03
ATG4C-202ENST00000371118 CAPNS2Q96L46 248 aa8.64□□□□□ -1.03
ATG4C-202ENST00000371118 NBPF4Q96M43 638 aa8.64□□□□□ -1.03
ATG4C-202ENST00000371118 STAC3Q96MF2 364 aa8.64□□□□□ -1.03
ATG4C-202ENST00000371118 TMOD3Q9NYL9 352 aa8.64□□□□□ -1.03
ATG4C-202ENST00000371118 SRP68Q9UHB9 627 aaKnown RBP8.64□□□□□ -1.03
ATG4C-202ENST00000371118 KDM6AO15550 1401 aaPredicted RBP8.63□□□□□ -1.03
ATG4C-202ENST00000371118 RGPD2P0DJD1 1756 aa8.63□□□□□ -1.03
ATG4C-202ENST00000371118 CASP8AP2Q9UKL3 1982 aa8.63□□□□□ -1.03
ATG4C-202ENST00000371118 SPDYE16A6NNV3 312 aaPredicted RBP8.63□□□□□ -1.03
ATG4C-202ENST00000371118 NFKBIEO00221 500 aa8.63□□□□□ -1.03
ATG4C-202ENST00000371118 DLL1O00548 723 aa8.63□□□□□ -1.03
ATG4C-202ENST00000371118 MLLT3P42568 568 aaPredicted RBP8.63□□□□□ -1.03
ATG4C-202ENST00000371118 DDR1Q08345 913 aa8.63□□□□□ -1.03
ATG4C-202ENST00000371118 MAP1SQ66K74 1059 aaPredicted RBP8.63□□□□□ -1.03
ATG4C-202ENST00000371118 TTLL6Q8N841 843 aa8.63□□□□□ -1.03
ATG4C-202ENST00000371118 TMC1Q8TDI8 760 aa8.63□□□□□ -1.03
ATG4C-202ENST00000371118 ZC3H15Q8WU90 426 aaKnown RBP8.63□□□□□ -1.03
ATG4C-202ENST00000371118 ZSWIM6Q9HCJ5 1215 aa8.63□□□□□ -1.03
ATG4C-202ENST00000371118 USP31Q70CQ4 1352 aa8.62□□□□□ -1.03
ATG4C-202ENST00000371118 IQCA1LA6NCM1 817 aa8.62□□□□□ -1.03
ATG4C-202ENST00000371118 ZNF316A6NFI3 1004 aaPredicted RBP8.62□□□□□ -1.03
ATG4C-202ENST00000371118 CYP27B1O15528 508 aa8.62□□□□□ -1.03
ATG4C-202ENST00000371118 AOC2O75106 756 aa8.62□□□□□ -1.03
ATG4C-202ENST00000371118 HOXC9P31274 260 aa8.62□□□□□ -1.03
ATG4C-202ENST00000371118 ECE1P42892 770 aa8.62□□□□□ -1.03
ATG4C-202ENST00000371118 LSM11P83369 360 aaKnown RBP eCLIP8.62□□□□□ -1.03
ATG4C-202ENST00000371118 PDIA6Q15084 440 aa8.62□□□□□ -1.03
ATG4C-202ENST00000371118 CNTROBQ8N137 903 aa8.62□□□□□ -1.03
ATG4C-202ENST00000371118 TAF1DQ9H5J8 278 aaPredicted RBP8.62□□□□□ -1.03
ATG4C-202ENST00000371118 CGNL1Q0VF96 1302 aa8.61□□□□□ -1.03
ATG4C-202ENST00000371118 C2CD5Q86YS7 1000 aa8.61□□□□□ -1.03
ATG4C-202ENST00000371118 GCC1Q96CN9 775 aa8.61□□□□□ -1.03
ATG4C-202ENST00000371118 ITGB4P16144 1822 aa8.61□□□□□ -1.03
ATG4C-202ENST00000371118 MAP3K19Q56UN5 1328 aa8.6□□□□□ -1.03
ATG4C-202ENST00000371118 FAM208AQ9UK61 1670 aaKnown RBP8.6□□□□□ -1.03
ATG4C-202ENST00000371118 C21orf2O43822 256 aa8.6□□□□□ -1.03
ATG4C-202ENST00000371118 HABP4Q5JVS0 413 aaKnown RBP8.6□□□□□ -1.03
ATG4C-202ENST00000371118 H0YIN7 160 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms