RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 SALL3Q9BXA9 1300 aa11.13□□□□□ -0.63
HMGCLL1-204ENST00000370852 HSPA4P34932 840 aa11.13□□□□□ -0.63
HMGCLL1-204ENST00000370852 ANAPC15P60006 121 aa11.13□□□□□ -0.63
HMGCLL1-204ENST00000370852 CCDC93Q567U6 631 aa11.13□□□□□ -0.63
HMGCLL1-204ENST00000370852 CT47A1Q5JQC4 288 aaPredicted RBP11.13□□□□□ -0.63
HMGCLL1-204ENST00000370852 E4F1Q66K89 784 aaPredicted RBP11.13□□□□□ -0.63
HMGCLL1-204ENST00000370852 SRLQ86TD4 932 aa11.13□□□□□ -0.63
HMGCLL1-204ENST00000370852 OSBPL3Q9H4L5 887 aa11.13□□□□□ -0.63
HMGCLL1-204ENST00000370852 MYOM2P54296 1465 aa11.12□□□□□ -0.63
HMGCLL1-204ENST00000370852 GNAI3P08754 354 aa11.12□□□□□ -0.63
HMGCLL1-204ENST00000370852 ZNF853P0CG23 659 aa11.12□□□□□ -0.63
HMGCLL1-204ENST00000370852 ADCK5Q3MIX3 580 aa11.12□□□□□ -0.63
HMGCLL1-204ENST00000370852 SLC4A10Q6U841 1118 aa11.12□□□□□ -0.63
HMGCLL1-204ENST00000370852 TXLNBQ8N3L3 684 aa11.12□□□□□ -0.63
HMGCLL1-204ENST00000370852 SPG7Q9UQ90 795 aa11.12□□□□□ -0.63
HMGCLL1-204ENST00000370852 PLCH2O75038 1416 aa11.12□□□□□ -0.63
HMGCLL1-204ENST00000370852 TBC1D8O95759 1140 aa11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 CASTP20810 708 aaKnown RBP11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 LMAN1P49257 510 aa11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 SNW1Q13573 536 aaKnown RBP11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 NFE2L2Q16236 605 aa11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 PLEKHA4Q9H4M7 779 aa11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 IL1RAPL2Q9NP60 686 aa11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 ORC3Q9UBD5 711 aaPredicted RBP11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 LIMCH1Q9UPQ0 1083 aa11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 YEATS2Q9ULM3 1422 aa11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 KIAA1210Q9ULL0 1709 aa11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 PNMA6EA0A0J9YXQ4 647 aa11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 H3BQF6 201 aa11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 IQCB1Q15051 598 aa11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 NUTM1Q86Y26 1132 aa11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 PGBD1Q96JS3 809 aa11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 PPP1R13BQ96KQ4 1090 aa11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 UBXN6Q9BZV1 441 aa11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 L2HGDHQ9H9P8 463 aa11.11□□□□□ -0.63
HMGCLL1-204ENST00000370852 GNAI1P63096 354 aa11.1□□□□□ -0.63
HMGCLL1-204ENST00000370852 TEX35Q5T0J7 233 aa11.1□□□□□ -0.63
HMGCLL1-204ENST00000370852 TMCO3Q6UWJ1 677 aa11.1□□□□□ -0.63
HMGCLL1-204ENST00000370852 G2E3Q7L622 706 aa11.1□□□□□ -0.63
HMGCLL1-204ENST00000370852 ZNF428Q96B54 188 aa11.1□□□□□ -0.63
HMGCLL1-204ENST00000370852 INO80Q9ULG1 1556 aaPredicted RBP11.1□□□□□ -0.63
HMGCLL1-204ENST00000370852 FAM193AP78312 1265 aa11.1□□□□□ -0.63
HMGCLL1-204ENST00000370852 SMC1AQ14683 1233 aaKnown RBP11.1□□□□□ -0.63
HMGCLL1-204ENST00000370852 ME3Q16798 604 aa11.1□□□□□ -0.63
HMGCLL1-204ENST00000370852 PTPN21Q16825 1174 aa11.1□□□□□ -0.63
HMGCLL1-204ENST00000370852 AFAP1Q8N556 730 aa11.1□□□□□ -0.63
HMGCLL1-204ENST00000370852 TCEANC2Q96MN5 208 aa11.1□□□□□ -0.63
HMGCLL1-204ENST00000370852 HYPKQ9NX55 129 aa11.1□□□□□ -0.63
HMGCLL1-204ENST00000370852 STAG3Q9UJ98 1225 aa11.1□□□□□ -0.63
HMGCLL1-204ENST00000370852 JRKLQ9Y4A0 524 aa11.1□□□□□ -0.63
HMGCLL1-204ENST00000370852 MYO3AQ8NEV4 1616 aa11.1□□□□□ -0.63
HMGCLL1-204ENST00000370852 USP32Q8NFA0 1604 aa11.1□□□□□ -0.63
HMGCLL1-204ENST00000370852 SBNO2Q9Y2G9 1366 aa11.1□□□□□ -0.63
HMGCLL1-204ENST00000370852 UHRF1BP1LA0JNW5 1464 aa11.09□□□□□ -0.63
HMGCLL1-204ENST00000370852 FCHSD2O94868 740 aa11.09□□□□□ -0.63
HMGCLL1-204ENST00000370852 APPP05067 770 aa11.09□□□□□ -0.63
HMGCLL1-204ENST00000370852 GUCY2CP25092 1073 aa11.09□□□□□ -0.63
HMGCLL1-204ENST00000370852 CHMP7Q8WUX9 453 aaPredicted RBP11.09□□□□□ -0.63
HMGCLL1-204ENST00000370852 CLSTN2Q9H4D0 955 aa11.09□□□□□ -0.63
HMGCLL1-204ENST00000370852 ZC3H13Q5T200 1668 aaKnown RBP11.09□□□□□ -0.63
HMGCLL1-204ENST00000370852 CEBPZQ03701 1054 aaKnown RBP11.09□□□□□ -0.63
HMGCLL1-204ENST00000370852 NBPF11Q86T75 865 aa11.09□□□□□ -0.63
HMGCLL1-204ENST00000370852 CREBRFQ8IUR6 639 aa11.09□□□□□ -0.63
HMGCLL1-204ENST00000370852 FBXO18Q8NFZ0 1043 aa11.09□□□□□ -0.63
HMGCLL1-204ENST00000370852 CARD6Q9BX69 1037 aa11.09□□□□□ -0.63
HMGCLL1-204ENST00000370852 FAM135BQ49AJ0 1406 aa11.09□□□□□ -0.63
HMGCLL1-204ENST00000370852 TULP4Q9NRJ4 1543 aa11.09□□□□□ -0.63
HMGCLL1-204ENST00000370852 MROH2AA6NES4 1674 aa11.09□□□□□ -0.63
HMGCLL1-204ENST00000370852 TPM4P67936 248 aa11.08□□□□□ -0.64
HMGCLL1-204ENST00000370852 NBPF6Q5VWK0 638 aa11.08□□□□□ -0.64
HMGCLL1-204ENST00000370852 DDX11Q96FC9 970 aa11.08□□□□□ -0.64
HMGCLL1-204ENST00000370852 NBPF4Q96M43 638 aa11.08□□□□□ -0.64
HMGCLL1-204ENST00000370852 MIS18AQ9NYP9 233 aa11.08□□□□□ -0.64
HMGCLL1-204ENST00000370852 DNAI1Q9UI46 699 aa11.08□□□□□ -0.64
HMGCLL1-204ENST00000370852 ADAM21Q9UKJ8 722 aa11.08□□□□□ -0.64
HMGCLL1-204ENST00000370852 ATP6V1DQ9Y5K8 247 aa11.08□□□□□ -0.64
HMGCLL1-204ENST00000370852 TUBGCP6Q96RT7 1819 aa11.08□□□□□ -0.64
HMGCLL1-204ENST00000370852 HTATSF1O43719 755 aaKnown RBP11.08□□□□□ -0.64
HMGCLL1-204ENST00000370852 GOLGA8FQ08AF8 430 aa11.08□□□□□ -0.64
HMGCLL1-204ENST00000370852 GOLGA8DPQ0D2H9 430 aa11.08□□□□□ -0.64
HMGCLL1-204ENST00000370852 SKIDA1Q1XH10 827 aa11.08□□□□□ -0.64
HMGCLL1-204ENST00000370852 LARP1BQ659C4 914 aaKnown RBP11.08□□□□□ -0.64
HMGCLL1-204ENST00000370852 FAM177A1Q8N128 213 aaPredicted RBP11.08□□□□□ -0.64
HMGCLL1-204ENST00000370852 NCAPGQ9BPX3 1015 aa11.08□□□□□ -0.64
HMGCLL1-204ENST00000370852 CDC25BP30305 580 aa11.07□□□□□ -0.64
HMGCLL1-204ENST00000370852 ARMCX5Q6P1M9 558 aa11.07□□□□□ -0.64
HMGCLL1-204ENST00000370852 CWC27Q6UX04 472 aaKnown RBP11.07□□□□□ -0.64
HMGCLL1-204ENST00000370852 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.07□□□□□ -0.64
HMGCLL1-204ENST00000370852 DHX40Q8IX18 779 aaKnown RBP11.07□□□□□ -0.64
HMGCLL1-204ENST00000370852 UBXN4Q92575 508 aa11.07□□□□□ -0.64
HMGCLL1-204ENST00000370852 SPATA32Q96LK8 384 aa11.07□□□□□ -0.64
HMGCLL1-204ENST00000370852 PRAM1Q96QH2 718 aa11.07□□□□□ -0.64
HMGCLL1-204ENST00000370852 MYCBPQ99417 103 aaPredicted RBP11.07□□□□□ -0.64
HMGCLL1-204ENST00000370852 LSG1Q9H089 658 aaKnown RBP11.07□□□□□ -0.64
HMGCLL1-204ENST00000370852 STK26Q9P289 416 aa11.07□□□□□ -0.64
HMGCLL1-204ENST00000370852 PLEKHG2Q9H7P9 1386 aa11.07□□□□□ -0.64
HMGCLL1-204ENST00000370852 TTC21AQ8NDW8 1320 aa11.07□□□□□ -0.64
HMGCLL1-204ENST00000370852 GOLGA6L19H0YKK7 550 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms