RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 ACEP12821 1306 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 SLC39A6Q13433 755 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 PLS1Q14651 629 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 C20orf194Q5TEA3 1177 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 CCDC113Q9H0I3 377 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 EHMT1Q9H9B1 1298 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 PUF60Q9UHX1 559 aaKnown RBP9.93□□□□□ -0.82
ABCA4-201ENST00000370225 NOS1P29475 1434 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 TOP2BQ02880 1626 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 SMTNL1A8MU46 457 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 TMEM67Q5HYA8 995 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 CPLX3Q8WVH0 158 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 SETDB2Q96T68 719 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 CCDC178Q5BJE1 867 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 C16orf71Q8IYS4 520 aaPredicted RBP9.93□□□□□ -0.82
ABCA4-201ENST00000370225 FLIIQ13045 1269 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 LEKR1Q6ZMV7 388 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 GOPCQ9HD26 462 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 MSH6P52701 1360 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 PCF11O94913 1555 aaKnown RBP9.93□□□□□ -0.82
ABCA4-201ENST00000370225 CCDC196A0A1B0GTZ2 297 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 HLA-DOAP06340 250 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 CCDC112Q8NEF3 446 aa9.93□□□□□ -0.82
ABCA4-201ENST00000370225 MICU3Q86XE3 530 aa9.92□□□□□ -0.82
ABCA4-201ENST00000370225 PTPN23Q9H3S7 1636 aa9.92□□□□□ -0.82
ABCA4-201ENST00000370225 VEZTQ9HBM0 779 aa9.92□□□□□ -0.82
ABCA4-201ENST00000370225 MAP3K11Q16584 847 aa9.92□□□□□ -0.82
ABCA4-201ENST00000370225 FKBP15Q5T1M5 1219 aa9.92□□□□□ -0.82
ABCA4-201ENST00000370225 DNAI2Q9GZS0 605 aa9.92□□□□□ -0.82
ABCA4-201ENST00000370225 JAG2Q9Y219 1238 aa9.92□□□□□ -0.82
ABCA4-201ENST00000370225 PI4KAP2A4QPH2 592 aa9.92□□□□□ -0.82
ABCA4-201ENST00000370225 BAG3O95817 575 aa9.92□□□□□ -0.82
ABCA4-201ENST00000370225 ARHGAP29Q52LW3 1261 aa9.92□□□□□ -0.82
ABCA4-201ENST00000370225 PI4KAP1Q8N8J0 262 aa9.92□□□□□ -0.82
ABCA4-201ENST00000370225 FERMT2Q96AC1 680 aa9.92□□□□□ -0.82
ABCA4-201ENST00000370225 BAG4O95429 457 aaKnown RBP9.92□□□□□ -0.82
ABCA4-201ENST00000370225 RIMBP2O15034 1052 aa9.92□□□□□ -0.82
ABCA4-201ENST00000370225 SPA17Q15506 151 aa9.92□□□□□ -0.82
ABCA4-201ENST00000370225 TCERG1LQ5VWI1 586 aa9.92□□□□□ -0.82
ABCA4-201ENST00000370225 CKAP2LQ8IYA6 745 aa9.92□□□□□ -0.82
ABCA4-201ENST00000370225 SYCP3Q8IZU3 236 aa9.92□□□□□ -0.82
ABCA4-201ENST00000370225 BICD1Q96G01 975 aa9.92□□□□□ -0.82
ABCA4-201ENST00000370225 RNF41Q9H4P4 317 aaPredicted RBP9.91□□□□□ -0.82
ABCA4-201ENST00000370225 PKNOX2Q96KN3 472 aa9.91□□□□□ -0.82
ABCA4-201ENST00000370225 STX8Q9UNK0 236 aa9.91□□□□□ -0.82
ABCA4-201ENST00000370225 BIN1O00499 593 aa9.91□□□□□ -0.82
ABCA4-201ENST00000370225 PDE4BQ07343 736 aa9.91□□□□□ -0.82
ABCA4-201ENST00000370225 CCDC152Q4G0S7 254 aa9.91□□□□□ -0.82
ABCA4-201ENST00000370225 RARSP54136 660 aaKnown RBP9.91□□□□□ -0.82
ABCA4-201ENST00000370225 MFSD6Q6ZSS7 791 aa9.91□□□□□ -0.82
ABCA4-201ENST00000370225 RAB34Q9BZG1 259 aa9.91□□□□□ -0.82
ABCA4-201ENST00000370225 TFCP2L1Q9NZI6 479 aa9.91□□□□□ -0.82
ABCA4-201ENST00000370225 CWC15Q9P013 229 aaKnown RBP9.91□□□□□ -0.82
ABCA4-201ENST00000370225 ABCC5O15440 1437 aa9.91□□□□□ -0.82
ABCA4-201ENST00000370225 ZCRB1Q8TBF4 217 aaKnown RBP9.91□□□□□ -0.82
ABCA4-201ENST00000370225 CHPF2Q9P2E5 772 aa9.91□□□□□ -0.82
ABCA4-201ENST00000370225 NUP88Q99567 741 aaPredicted RBP9.91□□□□□ -0.82
ABCA4-201ENST00000370225 SLC26A6Q9BXS9 759 aa9.91□□□□□ -0.82
ABCA4-201ENST00000370225 TSPY3P0CV98 308 aa9.9□□□□□ -0.82
ABCA4-201ENST00000370225 TSPY8P0CW00 308 aa9.9□□□□□ -0.82
ABCA4-201ENST00000370225 IDEP14735 1019 aa9.9□□□□□ -0.82
ABCA4-201ENST00000370225 CNNM3Q8NE01 707 aa9.9□□□□□ -0.82
ABCA4-201ENST00000370225 CCDC102AQ96A19 550 aa9.9□□□□□ -0.82
ABCA4-201ENST00000370225 GRPEL1Q9HAV7 217 aa9.9□□□□□ -0.82
ABCA4-201ENST00000370225 TOM1O60784 492 aa9.9□□□□□ -0.82
ABCA4-201ENST00000370225 TDRD12Q587J7 1177 aaKnown RBP9.9□□□□□ -0.82
ABCA4-201ENST00000370225 BACH2Q9BYV9 841 aa9.9□□□□□ -0.82
ABCA4-201ENST00000370225 DNAJC5BQ9UF47 199 aa9.9□□□□□ -0.82
ABCA4-201ENST00000370225 HSPA2P54652 639 aa9.9□□□□□ -0.82
ABCA4-201ENST00000370225 NIP7Q9Y221 180 aaKnown RBP eCLIP9.9□□□□□ -0.82
ABCA4-201ENST00000370225 SNRPA1P09661 255 aaKnown RBP9.9□□□□□ -0.83
ABCA4-201ENST00000370225 CADPS2Q86UW7 1296 aa9.9□□□□□ -0.83
ABCA4-201ENST00000370225 TTF1Q15361 905 aaPredicted RBP9.9□□□□□ -0.83
ABCA4-201ENST00000370225 EZRP15311 586 aaKnown RBP9.89□□□□□ -0.83
ABCA4-201ENST00000370225 IQCEQ6IPM2 695 aa9.89□□□□□ -0.83
ABCA4-201ENST00000370225 TEX13AQ9BXU3 409 aaPredicted RBP9.89□□□□□ -0.83
ABCA4-201ENST00000370225 MBIPQ9NS73 344 aa9.89□□□□□ -0.83
ABCA4-201ENST00000370225 COMMD10Q9Y6G5 202 aa9.89□□□□□ -0.83
ABCA4-201ENST00000370225 CCDC148Q8NFR7 591 aa9.89□□□□□ -0.83
ABCA4-201ENST00000370225 CTNNA2P26232 953 aa9.89□□□□□ -0.83
ABCA4-201ENST00000370225 LRRC59Q96AG4 307 aaKnown RBP9.89□□□□□ -0.83
ABCA4-201ENST00000370225 CALML4Q96GE6 196 aa9.89□□□□□ -0.83
ABCA4-201ENST00000370225 TFIP11Q9UBB9 837 aaKnown RBP9.89□□□□□ -0.83
ABCA4-201ENST00000370225 USP16Q9Y5T5 823 aa9.89□□□□□ -0.83
ABCA4-201ENST00000370225 FANCAO15360 1455 aa9.89□□□□□ -0.83
ABCA4-201ENST00000370225 CYP7A1P22680 504 aa9.89□□□□□ -0.83
ABCA4-201ENST00000370225 CETN2P41208 172 aa9.89□□□□□ -0.83
ABCA4-201ENST00000370225 ALDH1L2Q3SY69 923 aa9.89□□□□□ -0.83
ABCA4-201ENST00000370225 LRRC2Q9BYS8 371 aa9.89□□□□□ -0.83
ABCA4-201ENST00000370225 CRNKL1Q9BZJ0 848 aaKnown RBP9.89□□□□□ -0.83
ABCA4-201ENST00000370225 GDPD2Q9HCC8 539 aa9.89□□□□□ -0.83
ABCA4-201ENST00000370225 KIAA0586Q9BVV6 1533 aa9.89□□□□□ -0.83
ABCA4-201ENST00000370225 LDHCP07864 332 aa9.88□□□□□ -0.83
ABCA4-201ENST00000370225 METAP2P50579 478 aaKnown RBP eCLIP9.88□□□□□ -0.83
ABCA4-201ENST00000370225 DDB1Q16531 1140 aa9.88□□□□□ -0.83
ABCA4-201ENST00000370225 ZNF354CQ86Y25 554 aa9.88□□□□□ -0.83
ABCA4-201ENST00000370225 EVI5LQ96CN4 794 aa9.88□□□□□ -0.83
ABCA4-201ENST00000370225 GSTTP1A0A1W2PQM5 241 aa9.88□□□□□ -0.83
ABCA4-201ENST00000370225 PRC1O43663 620 aa9.88□□□□□ -0.83
ABCA4-201ENST00000370225 ANKRD13DQ6ZTN6 518 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms