RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 CHMP5Q9NZZ3 219 aa12.2□□□□□ -0.46
PRPF38B-203ENST00000370025 ANP32BQ92688 251 aaKnown RBP12.2□□□□□ -0.46
PRPF38B-203ENST00000370025 TTC22Q5TAA0 569 aa12.19□□□□□ -0.46
PRPF38B-203ENST00000370025 PHLPP1O60346 1717 aa12.19□□□□□ -0.46
PRPF38B-203ENST00000370025 TMOD3Q9NYL9 352 aa12.19□□□□□ -0.46
PRPF38B-203ENST00000370025 SRGAP3O43295 1099 aa12.19□□□□□ -0.46
PRPF38B-203ENST00000370025 CWF19L2Q2TBE0 894 aaKnown RBP12.19□□□□□ -0.46
PRPF38B-203ENST00000370025 ANKRD13DQ6ZTN6 518 aa12.19□□□□□ -0.46
PRPF38B-203ENST00000370025 MPNDQ8N594 471 aa12.19□□□□□ -0.46
PRPF38B-203ENST00000370025 SHANK3Q9BYB0 1731 aa12.19□□□□□ -0.46
PRPF38B-203ENST00000370025 RAB11FIP3O75154 756 aa12.18□□□□□ -0.46
PRPF38B-203ENST00000370025 C22orf23Q9BZE7 217 aa12.18□□□□□ -0.46
PRPF38B-203ENST00000370025 IBTKQ9P2D0 1353 aaPredicted RBP12.18□□□□□ -0.46
PRPF38B-203ENST00000370025 CDC45O75419 566 aa12.18□□□□□ -0.46
PRPF38B-203ENST00000370025 PIP4K2BP78356 416 aa12.18□□□□□ -0.46
PRPF38B-203ENST00000370025 POLA2Q14181 598 aa12.18□□□□□ -0.46
PRPF38B-203ENST00000370025 GRM8O00222 908 aa12.18□□□□□ -0.46
PRPF38B-203ENST00000370025 SURF6O75683 361 aaKnown RBP12.18□□□□□ -0.46
PRPF38B-203ENST00000370025 ADAMTS2O95450 1211 aa12.18□□□□□ -0.46
PRPF38B-203ENST00000370025 HSP90AB4PQ58FF6 505 aa12.18□□□□□ -0.46
PRPF38B-203ENST00000370025 OTUD7AQ8TE49 926 aaPredicted RBP12.18□□□□□ -0.46
PRPF38B-203ENST00000370025 METTL22Q9BUU2 404 aaPredicted RBP12.18□□□□□ -0.46
PRPF38B-203ENST00000370025 EXOC5O00471 708 aa12.17□□□□□ -0.46
PRPF38B-203ENST00000370025 HSCBQ8IWL3 235 aa12.17□□□□□ -0.46
PRPF38B-203ENST00000370025 PTCD1O75127 700 aaKnown RBP12.17□□□□□ -0.46
PRPF38B-203ENST00000370025 GSPT1P15170 499 aaKnown RBP12.17□□□□□ -0.46
PRPF38B-203ENST00000370025 LAMB4A4D0S4 1761 aa12.17□□□□□ -0.46
PRPF38B-203ENST00000370025 COL16A1Q07092 1604 aaPredicted RBP12.17□□□□□ -0.46
PRPF38B-203ENST00000370025 TBC1D9Q6ZT07 1266 aa12.17□□□□□ -0.46
PRPF38B-203ENST00000370025 NASPP49321 788 aaPredicted RBP12.16□□□□□ -0.46
PRPF38B-203ENST00000370025 MYD88Q99836 296 aa12.16□□□□□ -0.46
PRPF38B-203ENST00000370025 OSBPL3Q9H4L5 887 aa12.16□□□□□ -0.46
PRPF38B-203ENST00000370025 UQCRHLA0A096LP55 91 aa12.16□□□□□ -0.46
PRPF38B-203ENST00000370025 UQCRHP07919 91 aa12.16□□□□□ -0.46
PRPF38B-203ENST00000370025 PIP4K2AP48426 406 aaPredicted RBP12.16□□□□□ -0.46
PRPF38B-203ENST00000370025 PDE1AP54750 535 aa12.16□□□□□ -0.46
PRPF38B-203ENST00000370025 MTX1Q13505 466 aa12.16□□□□□ -0.46
PRPF38B-203ENST00000370025 CASC1Q6TDU7 716 aa12.16□□□□□ -0.46
PRPF38B-203ENST00000370025 LRP10Q7Z4F1 713 aa12.16□□□□□ -0.46
PRPF38B-203ENST00000370025 JARID2Q92833 1246 aaPredicted RBP12.16□□□□□ -0.46
PRPF38B-203ENST00000370025 CDCA7Q9BWT1 371 aaPredicted RBP12.16□□□□□ -0.46
PRPF38B-203ENST00000370025 UTYO14607 1347 aa12.16□□□□□ -0.46
PRPF38B-203ENST00000370025 NUTM2BA6NNL0 878 aaPredicted RBP12.15□□□□□ -0.46
PRPF38B-203ENST00000370025 NUTM2EB1AL46 878 aaPredicted RBP12.15□□□□□ -0.46
PRPF38B-203ENST00000370025 NUTM2AQ8IVF1 878 aaPredicted RBP12.15□□□□□ -0.46
PRPF38B-203ENST00000370025 DISP2A7MBM2 1401 aa12.15□□□□□ -0.46
PRPF38B-203ENST00000370025 UBR2Q8IWV8 1755 aa12.15□□□□□ -0.46
PRPF38B-203ENST00000370025 NEURL1BA8MQ27 555 aa12.15□□□□□ -0.46
PRPF38B-203ENST00000370025 IGKV5-2P06315 115 aa12.15□□□□□ -0.46
PRPF38B-203ENST00000370025 FGD1P98174 961 aa12.15□□□□□ -0.46
PRPF38B-203ENST00000370025 PLBD2Q8NHP8 589 aa12.15□□□□□ -0.46
PRPF38B-203ENST00000370025 MAPK8IP2Q13387 824 aaPredicted RBP12.15□□□□□ -0.47
PRPF38B-203ENST00000370025 OS9Q13438 667 aaPredicted RBP12.15□□□□□ -0.47
PRPF38B-203ENST00000370025 TNPO1Q92973 898 aaKnown RBP12.15□□□□□ -0.47
PRPF38B-203ENST00000370025 KIF1BPQ96EK5 621 aa12.15□□□□□ -0.47
PRPF38B-203ENST00000370025 TEX13AQ9BXU3 409 aaPredicted RBP12.15□□□□□ -0.47
PRPF38B-203ENST00000370025 DDX11L8A8MPP1 907 aa12.14□□□□□ -0.47
PRPF38B-203ENST00000370025 MX1P20591 662 aa12.14□□□□□ -0.47
PRPF38B-203ENST00000370025 GCKRQ14397 625 aa12.14□□□□□ -0.47
PRPF38B-203ENST00000370025 TSC1Q92574 1164 aa12.14□□□□□ -0.47
PRPF38B-203ENST00000370025 KCPQ6ZWJ8 1503 aa12.14□□□□□ -0.47
PRPF38B-203ENST00000370025 PAPPAQ13219 1627 aa12.14□□□□□ -0.47
PRPF38B-203ENST00000370025 SDSP20132 328 aa12.14□□□□□ -0.47
PRPF38B-203ENST00000370025 RHPN1Q8TCX5 695 aa12.14□□□□□ -0.47
PRPF38B-203ENST00000370025 TNS2Q63HR2 1409 aa12.14□□□□□ -0.47
PRPF38B-203ENST00000370025 FOXD4L5Q5VV16 416 aaPredicted RBP12.14□□□□□ -0.47
PRPF38B-203ENST00000370025 FOXD4L4Q8WXT5 416 aaPredicted RBP12.14□□□□□ -0.47
PRPF38B-203ENST00000370025 PIGBQ92521 554 aa12.14□□□□□ -0.47
PRPF38B-203ENST00000370025 THRAP3Q9Y2W1 955 aaKnown RBP12.14□□□□□ -0.47
PRPF38B-203ENST00000370025 KAT6BQ8WYB5 2073 aa12.13□□□□□ -0.47
PRPF38B-203ENST00000370025 GLI3P10071 1580 aa12.13□□□□□ -0.47
PRPF38B-203ENST00000370025 SUCLG2Q96I99 432 aa12.13□□□□□ -0.47
PRPF38B-203ENST00000370025 PLCH1Q4KWH8 1693 aa12.13□□□□□ -0.47
PRPF38B-203ENST00000370025 FAM177BA6PVY3 158 aa12.13□□□□□ -0.47
PRPF38B-203ENST00000370025 NBPF26B4DH59 902 aa12.13□□□□□ -0.47
PRPF38B-203ENST00000370025 UBAP1LF5GYI3 381 aa12.13□□□□□ -0.47
PRPF38B-203ENST00000370025 A1BGP04217 495 aa12.13□□□□□ -0.47
PRPF38B-203ENST00000370025 NBPF14Q5TI25 921 aa12.13□□□□□ -0.47
PRPF38B-203ENST00000370025 NBPF10Q6P3W6 841 aaKnown RBP12.13□□□□□ -0.47
PRPF38B-203ENST00000370025 NBPF15Q8N660 670 aa12.13□□□□□ -0.47
PRPF38B-203ENST00000370025 IL1RAPL2Q9NP60 686 aa12.13□□□□□ -0.47
PRPF38B-203ENST00000370025 TOGARAM1Q9Y4F4 1720 aa12.13□□□□□ -0.47
PRPF38B-203ENST00000370025 IGSF3O75054 1194 aa12.13□□□□□ -0.47
PRPF38B-203ENST00000370025 ZSCAN30Q86W11 494 aa12.13□□□□□ -0.47
PRPF38B-203ENST00000370025 RBM25P49756 843 aaKnown RBP12.12□□□□□ -0.47
PRPF38B-203ENST00000370025 PDE4CQ08493 712 aa12.12□□□□□ -0.47
PRPF38B-203ENST00000370025 ERC1Q8IUD2 1116 aa12.12□□□□□ -0.47
PRPF38B-203ENST00000370025 STAP2Q9UGK3 403 aa12.12□□□□□ -0.47
PRPF38B-203ENST00000370025 DDX49Q9Y6V7 483 aaKnown RBP12.12□□□□□ -0.47
PRPF38B-203ENST00000370025 SALL3Q9BXA9 1300 aa12.12□□□□□ -0.47
PRPF38B-203ENST00000370025 DNTTIP2Q5QJE6 756 aaKnown RBP12.12□□□□□ -0.47
PRPF38B-203ENST00000370025 BICC1Q9H694 974 aaKnown RBP12.12□□□□□ -0.47
PRPF38B-203ENST00000370025 ASAP1Q9ULH1 1129 aa12.12□□□□□ -0.47
PRPF38B-203ENST00000370025 AOX1Q06278 1338 aa12.12□□□□□ -0.47
PRPF38B-203ENST00000370025 SPATA31A1Q5TZJ5 1347 aa12.12□□□□□ -0.47
PRPF38B-203ENST00000370025 BBXQ8WY36 941 aaPredicted RBP12.12□□□□□ -0.47
PRPF38B-203ENST00000370025 RBM42Q9BTD8 480 aaKnown RBP12.12□□□□□ -0.47
PRPF38B-203ENST00000370025 ATG3Q9NT62 314 aa12.11□□□□□ -0.47
PRPF38B-203ENST00000370025 CCDC9Q9Y3X0 531 aaKnown RBP12.11□□□□□ -0.47
PRPF38B-203ENST00000370025 STARD3NLO95772 234 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms