RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 TYRO3Q06418 890 aa14.65□□□□□ -0.06
PHGDH-201ENST00000369407 ANO6Q4KMQ2 910 aa14.65□□□□□ -0.06
PHGDH-201ENST00000369407 TRIM5Q9C035 493 aa14.65□□□□□ -0.06
PHGDH-201ENST00000369407 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.65□□□□□ -0.06
PHGDH-201ENST00000369407 V9GYY5 206 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-201ENST00000369407 GOLGA6L6A8MZA4 724 aa14.65□□□□□ -0.06
PHGDH-201ENST00000369407 NBPF7P0C2Y1 421 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-201ENST00000369407 OS9Q13438 667 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-201ENST00000369407 DACT1Q9NYF0 836 aa14.65□□□□□ -0.06
PHGDH-201ENST00000369407 TAF7LQ5H9L4 462 aa14.65□□□□□ -0.06
PHGDH-201ENST00000369407 CCDC30Q5VVM6 783 aa14.65□□□□□ -0.06
PHGDH-201ENST00000369407 LARP1BQ659C4 914 aaKnown RBP14.65□□□□□ -0.06
PHGDH-201ENST00000369407 NUP62CLQ9H1M0 184 aa14.65□□□□□ -0.06
PHGDH-201ENST00000369407 TTC21BQ7Z4L5 1316 aa14.64□□□□□ -0.07
PHGDH-201ENST00000369407 ANXA1P04083 346 aa14.64□□□□□ -0.07
PHGDH-201ENST00000369407 MAP3K11Q16584 847 aa14.64□□□□□ -0.07
PHGDH-201ENST00000369407 CNTROBQ8N137 903 aa14.64□□□□□ -0.07
PHGDH-201ENST00000369407 FAM200AQ8TCP9 573 aa14.64□□□□□ -0.07
PHGDH-201ENST00000369407 CBX8Q9HC52 389 aa14.64□□□□□ -0.07
PHGDH-201ENST00000369407 TNNT1P13805 278 aa14.64□□□□□ -0.07
PHGDH-201ENST00000369407 STK3Q13188 491 aa14.64□□□□□ -0.07
PHGDH-201ENST00000369407 ARID5BQ14865 1188 aa14.63□□□□□ -0.07
PHGDH-201ENST00000369407 PLPPR3Q6T4P5 718 aa14.63□□□□□ -0.07
PHGDH-201ENST00000369407 CTIFO43310 598 aaKnown RBP14.63□□□□□ -0.07
PHGDH-201ENST00000369407 LTV1Q96GA3 475 aaPredicted RBP14.63□□□□□ -0.07
PHGDH-201ENST00000369407 TRERF1Q96PN7 1200 aa14.63□□□□□ -0.07
PHGDH-201ENST00000369407 TPCN1Q9ULQ1 816 aa14.63□□□□□ -0.07
PHGDH-201ENST00000369407 ACEP12821 1306 aa14.63□□□□□ -0.07
PHGDH-201ENST00000369407 A0A087WWV3 80 aa14.63□□□□□ -0.07
PHGDH-201ENST00000369407 KCNJ4P48050 445 aa14.63□□□□□ -0.07
PHGDH-201ENST00000369407 TNMDQ9H2S6 317 aa14.63□□□□□ -0.07
PHGDH-201ENST00000369407 SSH3Q8TE77 659 aa14.62□□□□□ -0.07
PHGDH-201ENST00000369407 IPO4Q8TEX9 1081 aaKnown RBP14.62□□□□□ -0.07
PHGDH-201ENST00000369407 IL17RAQ96F46 866 aa14.62□□□□□ -0.07
PHGDH-201ENST00000369407 GOLGA6L4A6NEF3 574 aa14.62□□□□□ -0.07
PHGDH-201ENST00000369407 DNAJC25Q9H1X3 360 aa14.62□□□□□ -0.07
PHGDH-201ENST00000369407 CYP46A1Q9Y6A2 500 aa14.62□□□□□ -0.07
PHGDH-201ENST00000369407 TPD52L1Q16890 204 aaPredicted RBP14.61□□□□□ -0.07
PHGDH-201ENST00000369407 NUTM2GQ5VZR2 741 aa14.61□□□□□ -0.07
PHGDH-201ENST00000369407 EYA1Q99502 592 aa14.61□□□□□ -0.07
PHGDH-201ENST00000369407 TAF6LQ9Y6J9 622 aa14.61□□□□□ -0.07
PHGDH-201ENST00000369407 RIMS1Q86UR5 1692 aaKnown RBP14.61□□□□□ -0.07
PHGDH-201ENST00000369407 NPHP1O15259 732 aa14.61□□□□□ -0.07
PHGDH-201ENST00000369407 CCDC144BQ3MJ40 725 aa14.61□□□□□ -0.07
PHGDH-201ENST00000369407 ZSCAN25Q6NSZ9 544 aa14.61□□□□□ -0.07
PHGDH-201ENST00000369407 CCDC144CPQ8IYA2 1237 aa14.61□□□□□ -0.07
PHGDH-201ENST00000369407 CEBPZQ03701 1054 aaKnown RBP14.61□□□□□ -0.07
PHGDH-201ENST00000369407 CACTINQ8WUQ7 758 aaKnown RBP14.61□□□□□ -0.07
PHGDH-201ENST00000369407 FOSBP53539 338 aa14.6□□□□□ -0.07
PHGDH-201ENST00000369407 KRT85P78386 507 aa14.6□□□□□ -0.07
PHGDH-201ENST00000369407 HDGFL1Q5TGJ6 251 aa14.6□□□□□ -0.07
PHGDH-201ENST00000369407 FBXW7Q969H0 707 aa14.6□□□□□ -0.07
PHGDH-201ENST00000369407 DDX11Q96FC9 970 aa14.6□□□□□ -0.07
PHGDH-201ENST00000369407 PA2G4Q9UQ80 394 aaKnown RBP14.6□□□□□ -0.07
PHGDH-201ENST00000369407 USP27XA6NNY8 438 aa14.6□□□□□ -0.07
PHGDH-201ENST00000369407 RAB11FIP3O75154 756 aa14.6□□□□□ -0.07
PHGDH-201ENST00000369407 KIF1BPQ96EK5 621 aa14.6□□□□□ -0.07
PHGDH-201ENST00000369407 FAM227BQ96M60 508 aa14.6□□□□□ -0.07
PHGDH-201ENST00000369407 DIP2CQ9Y2E4 1556 aa14.6□□□□□ -0.07
PHGDH-201ENST00000369407 NR1I2O75469 434 aa14.59□□□□□ -0.07
PHGDH-201ENST00000369407 KIF20AO95235 890 aa14.59□□□□□ -0.07
PHGDH-201ENST00000369407 TPM3P06753 285 aa14.59□□□□□ -0.07
PHGDH-201ENST00000369407 AMPHP49418 695 aa14.59□□□□□ -0.07
PHGDH-201ENST00000369407 TAF7Q15545 349 aaPredicted RBP14.59□□□□□ -0.07
PHGDH-201ENST00000369407 ZNF75DP51815 510 aa14.59□□□□□ -0.07
PHGDH-201ENST00000369407 ZBTB9Q96C00 473 aa14.59□□□□□ -0.07
PHGDH-201ENST00000369407 CTNNA3Q9UI47 895 aa14.59□□□□□ -0.07
PHGDH-201ENST00000369407 LARP1Q6PKG0 1096 aaKnown RBP14.59□□□□□ -0.07
PHGDH-201ENST00000369407 CCDC112Q8NEF3 446 aa14.59□□□□□ -0.07
PHGDH-201ENST00000369407 IL17REQ8NFR9 667 aa14.59□□□□□ -0.07
PHGDH-201ENST00000369407 BICD2Q8TD16 824 aa14.59□□□□□ -0.07
PHGDH-201ENST00000369407 SPATA32Q96LK8 384 aa14.59□□□□□ -0.07
PHGDH-201ENST00000369407 TRMT1Q9NXH9 659 aaKnown RBP14.59□□□□□ -0.07
PHGDH-201ENST00000369407 CLIP2Q9UDT6 1046 aa14.59□□□□□ -0.07
PHGDH-201ENST00000369407 VPS53Q5VIR6 699 aa14.58□□□□□ -0.08
PHGDH-201ENST00000369407 USHBP1Q8N6Y0 703 aa14.58□□□□□ -0.08
PHGDH-201ENST00000369407 PREX1Q8TCU6 1659 aa14.58□□□□□ -0.08
PHGDH-201ENST00000369407 AOX1Q06278 1338 aa14.58□□□□□ -0.08
PHGDH-201ENST00000369407 PPFIA3O75145 1194 aa14.58□□□□□ -0.08
PHGDH-201ENST00000369407 ZNF165P49910 485 aa14.58□□□□□ -0.08
PHGDH-201ENST00000369407 SYTL4Q96C24 671 aaPredicted RBP14.58□□□□□ -0.08
PHGDH-201ENST00000369407 ZSWIM6Q9HCJ5 1215 aa14.58□□□□□ -0.08
PHGDH-201ENST00000369407 RBM8AQ9Y5S9 174 aaKnown RBP14.58□□□□□ -0.08
PHGDH-201ENST00000369407 OGFRQ9NZT2 677 aa14.57□□□□□ -0.08
PHGDH-201ENST00000369407 TUBGCP6Q96RT7 1819 aa14.57□□□□□ -0.08
PHGDH-201ENST00000369407 SMTNL1A8MU46 457 aa14.57□□□□□ -0.08
PHGDH-201ENST00000369407 PI4KAP2A4QPH2 592 aa14.57□□□□□ -0.08
PHGDH-201ENST00000369407 POLA2Q14181 598 aa14.57□□□□□ -0.08
PHGDH-201ENST00000369407 CREB3L3Q68CJ9 461 aa14.57□□□□□ -0.08
PHGDH-201ENST00000369407 PI4KAP1Q8N8J0 262 aa14.57□□□□□ -0.08
PHGDH-201ENST00000369407 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.57□□□□□ -0.08
PHGDH-201ENST00000369407 ERCC4Q92889 916 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-201ENST00000369407 GNAT3A8MTJ3 354 aa14.56□□□□□ -0.08
PHGDH-201ENST00000369407 FILIP1Q7Z7B0 1213 aa14.56□□□□□ -0.08
PHGDH-201ENST00000369407 ST7Q9NRC1 585 aa14.56□□□□□ -0.08
PHGDH-201ENST00000369407 DLC1Q96QB1 1528 aa14.55□□□□□ -0.08
PHGDH-201ENST00000369407 JAK2O60674 1132 aa14.55□□□□□ -0.08
PHGDH-201ENST00000369407 ZKSCAN1P17029 563 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-201ENST00000369407 LEO1Q8WVC0 666 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-201ENST00000369407 PGBD1Q96JS3 809 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms