RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 METTL22Q9BUU2 404 aaPredicted RBP17.65■□□□□ 0.42
HMGCS2-201ENST00000369406 DDX58O95786 925 aaKnown RBP17.64■□□□□ 0.42
HMGCS2-201ENST00000369406 VSIG10Q8N0Z9 540 aa17.64■□□□□ 0.42
HMGCS2-201ENST00000369406 KAZALD1Q96I82 304 aa17.64■□□□□ 0.42
HMGCS2-201ENST00000369406 CICQ96RK0 1608 aaPredicted RBP17.64■□□□□ 0.42
HMGCS2-201ENST00000369406 NHSQ6T4R5 1651 aa17.64■□□□□ 0.41
HMGCS2-201ENST00000369406 NEURL1BA8MQ27 555 aa17.64■□□□□ 0.41
HMGCS2-201ENST00000369406 SMARCA5O60264 1052 aaPredicted RBP17.64■□□□□ 0.41
HMGCS2-201ENST00000369406 ALDH1L1O75891 902 aa17.64■□□□□ 0.41
HMGCS2-201ENST00000369406 CYP19A1P11511 503 aaPredicted RBP17.64■□□□□ 0.41
HMGCS2-201ENST00000369406 JARID2Q92833 1246 aaPredicted RBP17.64■□□□□ 0.41
HMGCS2-201ENST00000369406 RREB1Q92766 1687 aa17.64■□□□□ 0.41
HMGCS2-201ENST00000369406 ATP5J2-PTCD1G3V325 749 aa17.63■□□□□ 0.41
HMGCS2-201ENST00000369406 ATP8B2P98198 1209 aa17.63■□□□□ 0.41
HMGCS2-201ENST00000369406 APBB1O00213 710 aa17.63■□□□□ 0.41
HMGCS2-201ENST00000369406 NUP98P52948 1817 aa17.62■□□□□ 0.41
HMGCS2-201ENST00000369406 C16orf71Q8IYS4 520 aaPredicted RBP17.62■□□□□ 0.41
HMGCS2-201ENST00000369406 OTUD7AQ8TE49 926 aaPredicted RBP17.62■□□□□ 0.41
HMGCS2-201ENST00000369406 ZBTB3Q9H5J0 574 aa17.62■□□□□ 0.41
HMGCS2-201ENST00000369406 PLBD2Q8NHP8 589 aa17.62■□□□□ 0.41
HMGCS2-201ENST00000369406 SUCLG2Q96I99 432 aa17.62■□□□□ 0.41
HMGCS2-201ENST00000369406 EXOC6BQ9Y2D4 811 aa17.62■□□□□ 0.41
HMGCS2-201ENST00000369406 ZBTB1Q9Y2K1 713 aa17.62■□□□□ 0.41
HMGCS2-201ENST00000369406 ITPK1Q13572 414 aa17.61■□□□□ 0.41
HMGCS2-201ENST00000369406 PPP1R42Q7Z4L9 355 aa17.61■□□□□ 0.41
HMGCS2-201ENST00000369406 BCL11AQ9H165 835 aa17.61■□□□□ 0.41
HMGCS2-201ENST00000369406 UTYO14607 1347 aa17.61■□□□□ 0.41
HMGCS2-201ENST00000369406 GRM8O00222 908 aa17.61■□□□□ 0.41
HMGCS2-201ENST00000369406 GCKRQ14397 625 aa17.61■□□□□ 0.41
HMGCS2-201ENST00000369406 ZNF330Q9Y3S2 320 aaPredicted RBP17.61■□□□□ 0.41
HMGCS2-201ENST00000369406 ANKRD36CQ5JPF3 1778 aa17.61■□□□□ 0.41
HMGCS2-201ENST00000369406 PALLDQ8WX93 1383 aa17.6■□□□□ 0.41
HMGCS2-201ENST00000369406 EPHA10Q5JZY3 1008 aa17.6■□□□□ 0.41
HMGCS2-201ENST00000369406 C9orf78Q9NZ63 289 aaPredicted RBP17.6■□□□□ 0.41
HMGCS2-201ENST00000369406 KCNQ4P56696 695 aa17.59■□□□□ 0.41
HMGCS2-201ENST00000369406 POLA2Q14181 598 aa17.59■□□□□ 0.41
HMGCS2-201ENST00000369406 FAM161AQ3B820 660 aa17.59■□□□□ 0.41
HMGCS2-201ENST00000369406 SSH3Q8TE77 659 aa17.59■□□□□ 0.41
HMGCS2-201ENST00000369406 TUBGCP6Q96RT7 1819 aa17.59■□□□□ 0.41
HMGCS2-201ENST00000369406 LOC102724428A0A0B4J2F2 783 aa17.58■□□□□ 0.41
HMGCS2-201ENST00000369406 ONECUT3O60422 494 aaPredicted RBP17.58■□□□□ 0.41
HMGCS2-201ENST00000369406 SIK1P57059 783 aa17.58■□□□□ 0.41
HMGCS2-201ENST00000369406 TRPC5Q9UL62 973 aaPredicted RBP17.58■□□□□ 0.41
HMGCS2-201ENST00000369406 ZNF831Q5JPB2 1677 aa17.58■□□□□ 0.41
HMGCS2-201ENST00000369406 STARD3NLO95772 234 aa17.58■□□□□ 0.4
HMGCS2-201ENST00000369406 TEX13AQ9BXU3 409 aaPredicted RBP17.58■□□□□ 0.4
HMGCS2-201ENST00000369406 INTS5Q6P9B9 1019 aaKnown RBP17.57■□□□□ 0.4
HMGCS2-201ENST00000369406 SEPT12Q8IYM1 358 aa17.57■□□□□ 0.4
HMGCS2-201ENST00000369406 BICC1Q9H694 974 aaKnown RBP17.57■□□□□ 0.4
HMGCS2-201ENST00000369406 QTRT2Q9H974 415 aaKnown RBP17.57■□□□□ 0.4
HMGCS2-201ENST00000369406 SRGAP3O43295 1099 aa17.57■□□□□ 0.4
HMGCS2-201ENST00000369406 HMMRO75330 724 aa17.57■□□□□ 0.4
HMGCS2-201ENST00000369406 SEC24BO95487 1268 aa17.57■□□□□ 0.4
HMGCS2-201ENST00000369406 ATP6V1AP38606 617 aa17.57■□□□□ 0.4
HMGCS2-201ENST00000369406 CASP7P55210 303 aa17.57■□□□□ 0.4
HMGCS2-201ENST00000369406 NEXNQ0ZGT2 675 aa17.57■□□□□ 0.4
HMGCS2-201ENST00000369406 IBTKQ9P2D0 1353 aaPredicted RBP17.57■□□□□ 0.4
HMGCS2-201ENST00000369406 LY75O60449 1722 aa17.57■□□□□ 0.4
HMGCS2-201ENST00000369406 TAF1LQ8IZX4 1826 aa17.56■□□□□ 0.4
HMGCS2-201ENST00000369406 HLFQ16534 295 aa17.56■□□□□ 0.4
HMGCS2-201ENST00000369406 MTX1Q13505 466 aa17.55■□□□□ 0.4
HMGCS2-201ENST00000369406 UBE3BQ7Z3V4 1068 aa17.55■□□□□ 0.4
HMGCS2-201ENST00000369406 PLEKHM2Q8IWE5 1019 aa17.55■□□□□ 0.4
HMGCS2-201ENST00000369406 CRKLP46109 303 aaKnown RBP17.54■□□□□ 0.4
HMGCS2-201ENST00000369406 RTL5Q5HYW3 569 aaPredicted RBP17.54■□□□□ 0.4
HMGCS2-201ENST00000369406 PA2G4Q9UQ80 394 aaKnown RBP17.54■□□□□ 0.4
HMGCS2-201ENST00000369406 LINC00116Q8NCU8 138 aa17.53■□□□□ 0.4
HMGCS2-201ENST00000369406 A0A087WZG4 1122 aa17.52■□□□□ 0.4
HMGCS2-201ENST00000369406 SMIM5Q71RC9 77 aa17.52■□□□□ 0.4
HMGCS2-201ENST00000369406 ISCA1Q9BUE6 129 aa17.52■□□□□ 0.4
HMGCS2-201ENST00000369406 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.52■□□□□ 0.4
HMGCS2-201ENST00000369406 MAP3K15Q6ZN16 1313 aa17.52■□□□□ 0.4
HMGCS2-201ENST00000369406 BCORQ6W2J9 1755 aa17.52■□□□□ 0.4
HMGCS2-201ENST00000369406 GSPT1P15170 499 aaKnown RBP17.52■□□□□ 0.4
HMGCS2-201ENST00000369406 KLHDC4Q8TBB5 520 aa17.52■□□□□ 0.4
HMGCS2-201ENST00000369406 TBC1D2BQ9UPU7 963 aa17.52■□□□□ 0.4
HMGCS2-201ENST00000369406 SALL3Q9BXA9 1300 aa17.52■□□□□ 0.39
HMGCS2-201ENST00000369406 SURF6O75683 361 aaKnown RBP17.51■□□□□ 0.39
HMGCS2-201ENST00000369406 TSHZ3Q63HK5 1081 aa17.51■□□□□ 0.39
HMGCS2-201ENST00000369406 ARXQ96QS3 562 aa17.51■□□□□ 0.39
HMGCS2-201ENST00000369406 CCDC87Q9NVE4 849 aa17.51■□□□□ 0.39
HMGCS2-201ENST00000369406 H7C1W4 665 aa17.51■□□□□ 0.39
HMGCS2-201ENST00000369406 EIF5P55010 431 aaKnown RBP17.51■□□□□ 0.39
HMGCS2-201ENST00000369406 TCIRG1Q13488 830 aa17.5■□□□□ 0.39
HMGCS2-201ENST00000369406 IL1RAPL2Q9NP60 686 aa17.5■□□□□ 0.39
HMGCS2-201ENST00000369406 CWC25Q9NXE8 425 aaPredicted RBP17.5■□□□□ 0.39
HMGCS2-201ENST00000369406 IL6STP40189 918 aaPredicted RBP17.5■□□□□ 0.39
HMGCS2-201ENST00000369406 KIF6Q6ZMV9 814 aa17.5■□□□□ 0.39
HMGCS2-201ENST00000369406 SYNE4Q8N205 404 aa17.5■□□□□ 0.39
HMGCS2-201ENST00000369406 SMARCC1Q92922 1105 aaPredicted RBP17.49■□□□□ 0.39
HMGCS2-201ENST00000369406 LRRCC1Q9C099 1032 aa17.49■□□□□ 0.39
HMGCS2-201ENST00000369406 MYH3P11055 1940 aa17.49■□□□□ 0.39
HMGCS2-201ENST00000369406 GPTP24298 496 aa17.49■□□□□ 0.39
HMGCS2-201ENST00000369406 FOXO4P98177 505 aa17.49■□□□□ 0.39
HMGCS2-201ENST00000369406 GIGYF2Q6Y7W6 1299 aaKnown RBP17.48■□□□□ 0.39
HMGCS2-201ENST00000369406 NPM2Q86SE8 214 aaKnown RBP17.48■□□□□ 0.39
HMGCS2-201ENST00000369406 DZIP3Q86Y13 1208 aaKnown RBP17.48■□□□□ 0.39
HMGCS2-201ENST00000369406 COL15A1P39059 1388 aa17.48■□□□□ 0.39
HMGCS2-201ENST00000369406 RFX5P48382 616 aaPredicted RBP17.48■□□□□ 0.39
HMGCS2-201ENST00000369406 RABL6Q3YEC7 729 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms