RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 TSHZ3Q63HK5 1081 aa12.53□□□□□ -0.4
LYSMD1-201ENST00000368908 SPC24Q8NBT2 197 aa12.53□□□□□ -0.4
LYSMD1-201ENST00000368908 RBM33Q96EV2 1170 aaKnown RBP12.53□□□□□ -0.4
LYSMD1-201ENST00000368908 MTMR6Q9Y217 621 aa12.53□□□□□ -0.4
LYSMD1-201ENST00000368908 SGSM2O43147 1006 aa12.53□□□□□ -0.4
LYSMD1-201ENST00000368908 TOM1O60784 492 aa12.53□□□□□ -0.4
LYSMD1-201ENST00000368908 AK2P54819 239 aa12.53□□□□□ -0.4
LYSMD1-201ENST00000368908 MAP3K11Q16584 847 aa12.53□□□□□ -0.4
LYSMD1-201ENST00000368908 RUFY3Q7L099 469 aa12.53□□□□□ -0.4
LYSMD1-201ENST00000368908 CADPS2Q86UW7 1296 aa12.53□□□□□ -0.4
LYSMD1-201ENST00000368908 CREBRFQ8IUR6 639 aa12.53□□□□□ -0.4
LYSMD1-201ENST00000368908 COG3Q96JB2 828 aa12.53□□□□□ -0.4
LYSMD1-201ENST00000368908 ZSCAN31Q96LW9 406 aaPredicted RBP12.53□□□□□ -0.4
LYSMD1-201ENST00000368908 SH2B1Q9NRF2 756 aaPredicted RBP12.53□□□□□ -0.4
LYSMD1-201ENST00000368908 LRRC37A3O60309 1634 aa12.53□□□□□ -0.4
LYSMD1-201ENST00000368908 C14orf37Q86TY3 774 aa12.52□□□□□ -0.4
LYSMD1-201ENST00000368908 NME9Q86XW9 330 aa12.52□□□□□ -0.4
LYSMD1-201ENST00000368908 SLFN14P0C7P3 912 aa12.52□□□□□ -0.41
LYSMD1-201ENST00000368908 CDC25BP30305 580 aa12.52□□□□□ -0.41
LYSMD1-201ENST00000368908 UNC5CLQ8IV45 518 aa12.52□□□□□ -0.41
LYSMD1-201ENST00000368908 LSG1Q9H089 658 aaKnown RBP12.52□□□□□ -0.41
LYSMD1-201ENST00000368908 MRVI1Q9Y6F6 885 aa12.52□□□□□ -0.41
LYSMD1-201ENST00000368908 TYRO3Q06418 890 aa12.51□□□□□ -0.41
LYSMD1-201ENST00000368908 PLA2G4DQ86XP0 818 aa12.51□□□□□ -0.41
LYSMD1-201ENST00000368908 CCDC112Q8NEF3 446 aa12.51□□□□□ -0.41
LYSMD1-201ENST00000368908 TDRD7Q8NHU6 1098 aaKnown RBP12.51□□□□□ -0.41
LYSMD1-201ENST00000368908 NUP62CLQ9H1M0 184 aa12.51□□□□□ -0.41
LYSMD1-201ENST00000368908 CCDC66A2RUB6 948 aa12.51□□□□□ -0.41
LYSMD1-201ENST00000368908 TNNT1P13805 278 aa12.51□□□□□ -0.41
LYSMD1-201ENST00000368908 ATF3P18847 181 aa12.51□□□□□ -0.41
LYSMD1-201ENST00000368908 DNM1Q05193 864 aaKnown RBP12.51□□□□□ -0.41
LYSMD1-201ENST00000368908 RBM43Q6ZSC3 357 aaKnown RBP12.51□□□□□ -0.41
LYSMD1-201ENST00000368908 KIF18AQ8NI77 898 aa12.51□□□□□ -0.41
LYSMD1-201ENST00000368908 IL25Q9H293 177 aa12.51□□□□□ -0.41
LYSMD1-201ENST00000368908 MST1RQ04912 1400 aa12.5□□□□□ -0.41
LYSMD1-201ENST00000368908 RAB11FIP3O75154 756 aa12.5□□□□□ -0.41
LYSMD1-201ENST00000368908 ZNF75DP51815 510 aa12.5□□□□□ -0.41
LYSMD1-201ENST00000368908 ZNF397Q8NF99 534 aaPredicted RBP12.5□□□□□ -0.41
LYSMD1-201ENST00000368908 FBXO41Q8TF61 875 aa12.5□□□□□ -0.41
LYSMD1-201ENST00000368908 TM6SF1Q9BZW5 370 aa12.5□□□□□ -0.41
LYSMD1-201ENST00000368908 FAM53CQ9NYF3 392 aa12.5□□□□□ -0.41
LYSMD1-201ENST00000368908 ANKARQ7Z5J8 1434 aa12.5□□□□□ -0.41
LYSMD1-201ENST00000368908 PNMA6EA0A0J9YXQ4 647 aa12.5□□□□□ -0.41
LYSMD1-201ENST00000368908 GJB2P29033 226 aa12.5□□□□□ -0.41
LYSMD1-201ENST00000368908 GTF2E1P29083 439 aaPredicted RBP12.5□□□□□ -0.41
LYSMD1-201ENST00000368908 VPS53Q5VIR6 699 aa12.5□□□□□ -0.41
LYSMD1-201ENST00000368908 ZSCAN25Q6NSZ9 544 aa12.5□□□□□ -0.41
LYSMD1-201ENST00000368908 SLC4A10Q6U841 1118 aa12.5□□□□□ -0.41
LYSMD1-201ENST00000368908 G2E3Q7L622 706 aa12.5□□□□□ -0.41
LYSMD1-201ENST00000368908 CCDC186Q7Z3E2 898 aa12.5□□□□□ -0.41
LYSMD1-201ENST00000368908 KRT222Q8N1A0 295 aa12.5□□□□□ -0.41
LYSMD1-201ENST00000368908 SOS1Q07889 1333 aaPredicted RBP12.5□□□□□ -0.41
LYSMD1-201ENST00000368908 UBAP1LF5GYI3 381 aa12.49□□□□□ -0.41
LYSMD1-201ENST00000368908 CAVIN2O95810 425 aa12.49□□□□□ -0.41
LYSMD1-201ENST00000368908 KRT85P78386 507 aa12.49□□□□□ -0.41
LYSMD1-201ENST00000368908 SLFNL1Q499Z3 407 aa12.49□□□□□ -0.41
LYSMD1-201ENST00000368908 KCNB2Q92953 911 aa12.49□□□□□ -0.41
LYSMD1-201ENST00000368908 DDX19AQ9NUU7 478 aaKnown RBP12.49□□□□□ -0.41
LYSMD1-201ENST00000368908 HYPKQ9NX55 129 aa12.49□□□□□ -0.41
LYSMD1-201ENST00000368908 TTC21AQ8NDW8 1320 aa12.49□□□□□ -0.41
LYSMD1-201ENST00000368908 F6X3S4 739 aa12.49□□□□□ -0.41
LYSMD1-201ENST00000368908 NEMFO60524 1076 aa12.49□□□□□ -0.41
LYSMD1-201ENST00000368908 BBXQ8WY36 941 aaPredicted RBP12.49□□□□□ -0.41
LYSMD1-201ENST00000368908 C16orf45Q96MC5 204 aaPredicted RBP12.49□□□□□ -0.41
LYSMD1-201ENST00000368908 NUTM2FA1L443 756 aa12.48□□□□□ -0.41
LYSMD1-201ENST00000368908 EIF4A2Q14240 407 aaKnown RBP12.48□□□□□ -0.41
LYSMD1-201ENST00000368908 RRS1Q15050 365 aaKnown RBP12.48□□□□□ -0.41
LYSMD1-201ENST00000368908 TERF2Q15554 542 aa12.48□□□□□ -0.41
LYSMD1-201ENST00000368908 MCM10Q7L590 875 aa12.48□□□□□ -0.41
LYSMD1-201ENST00000368908 PI4K2BQ8TCG2 481 aa12.48□□□□□ -0.41
LYSMD1-201ENST00000368908 CBX8Q9HC52 389 aa12.48□□□□□ -0.41
LYSMD1-201ENST00000368908 TMEM51Q9NW97 253 aa12.48□□□□□ -0.41
LYSMD1-201ENST00000368908 KIF1AQ12756 1690 aa12.48□□□□□ -0.41
LYSMD1-201ENST00000368908 PEAK1Q9H792 1746 aa12.48□□□□□ -0.41
LYSMD1-201ENST00000368908 USP42Q9H9J4 1324 aaKnown RBP12.48□□□□□ -0.41
LYSMD1-201ENST00000368908 SULT6B1Q6IMI4 303 aa12.48□□□□□ -0.41
LYSMD1-201ENST00000368908 RASEFQ8IZ41 740 aa12.48□□□□□ -0.41
LYSMD1-201ENST00000368908 CNTROBQ8N137 903 aa12.48□□□□□ -0.41
LYSMD1-201ENST00000368908 SSH3Q8TE77 659 aa12.48□□□□□ -0.41
LYSMD1-201ENST00000368908 ROBO1Q9Y6N7 1651 aa12.47□□□□□ -0.41
LYSMD1-201ENST00000368908 C1orf167Q5SNV9 1468 aa12.47□□□□□ -0.41
LYSMD1-201ENST00000368908 MAP3K5Q99683 1374 aa12.47□□□□□ -0.41
LYSMD1-201ENST00000368908 LARGE1O95461 756 aa12.47□□□□□ -0.41
LYSMD1-201ENST00000368908 TTC6Q86TZ1 520 aa12.47□□□□□ -0.41
LYSMD1-201ENST00000368908 LUZP1Q86V48 1076 aa12.47□□□□□ -0.41
LYSMD1-201ENST00000368908 STK31Q9BXU1 1019 aa12.47□□□□□ -0.41
LYSMD1-201ENST00000368908 ZRANB1Q9UGI0 708 aa12.47□□□□□ -0.41
LYSMD1-201ENST00000368908 RNF20Q5VTR2 975 aa12.47□□□□□ -0.41
LYSMD1-201ENST00000368908 CCDC83Q8IWF9 413 aa12.47□□□□□ -0.41
LYSMD1-201ENST00000368908 TNMDQ9H2S6 317 aa12.47□□□□□ -0.41
LYSMD1-201ENST00000368908 CLSTN2Q9H4D0 955 aa12.47□□□□□ -0.41
LYSMD1-201ENST00000368908 NPHP3Q7Z494 1330 aa12.46□□□□□ -0.41
LYSMD1-201ENST00000368908 TOPAZ1Q8N9V7 1692 aa12.46□□□□□ -0.41
LYSMD1-201ENST00000368908 WASLO00401 505 aaPredicted RBP12.46□□□□□ -0.41
LYSMD1-201ENST00000368908 RBM6P78332 1123 aaKnown RBP12.46□□□□□ -0.41
LYSMD1-201ENST00000368908 LRMPQ12912 555 aa12.46□□□□□ -0.41
LYSMD1-201ENST00000368908 ANO6Q4KMQ2 910 aa12.46□□□□□ -0.41
LYSMD1-201ENST00000368908 CEP135Q66GS9 1140 aa12.46□□□□□ -0.41
LYSMD1-201ENST00000368908 SARM1Q6SZW1 724 aa12.46□□□□□ -0.41
LYSMD1-201ENST00000368908 DRC7Q8IY82 874 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms