RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 TEX13AQ9BXU3 409 aaPredicted RBP18.56■□□□□ 0.56
NEK2-201ENST00000366998 LRRCC1Q9C099 1032 aa18.56■□□□□ 0.56
NEK2-201ENST00000366998 SPATA31A6Q5VVP1 1343 aa18.56■□□□□ 0.56
NEK2-201ENST00000366998 IBTKQ9P2D0 1353 aaPredicted RBP18.56■□□□□ 0.56
NEK2-201ENST00000366998 POLA2Q14181 598 aa18.55■□□□□ 0.56
NEK2-201ENST00000366998 DNAJC10Q8IXB1 793 aa18.55■□□□□ 0.56
NEK2-201ENST00000366998 OTUD7AQ8TE49 926 aaPredicted RBP18.55■□□□□ 0.56
NEK2-201ENST00000366998 UPF2Q9HAU5 1272 aaKnown RBP18.55■□□□□ 0.56
NEK2-201ENST00000366998 UTYO14607 1347 aa18.54■□□□□ 0.56
NEK2-201ENST00000366998 TTLL7Q6ZT98 887 aa18.54■□□□□ 0.56
NEK2-201ENST00000366998 BCL9LQ86UU0 1499 aa18.54■□□□□ 0.56
NEK2-201ENST00000366998 SURF6O75683 361 aaKnown RBP18.54■□□□□ 0.56
NEK2-201ENST00000366998 GCKRQ14397 625 aa18.54■□□□□ 0.56
NEK2-201ENST00000366998 VPS72Q15906 364 aa18.54■□□□□ 0.56
NEK2-201ENST00000366998 FAM98CQ17RN3 349 aaKnown RBP18.54■□□□□ 0.56
NEK2-201ENST00000366998 MARCH10Q8NA82 808 aaPredicted RBP18.54■□□□□ 0.56
NEK2-201ENST00000366998 SUCLG2Q96I99 432 aa18.54■□□□□ 0.56
NEK2-201ENST00000366998 STARD3NLO95772 234 aa18.53■□□□□ 0.56
NEK2-201ENST00000366998 ACSBG1Q96GR2 724 aa18.53■□□□□ 0.56
NEK2-201ENST00000366998 ZNF330Q9Y3S2 320 aaPredicted RBP18.53■□□□□ 0.56
NEK2-201ENST00000366998 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.53■□□□□ 0.56
NEK2-201ENST00000366998 ATP5J2-PTCD1G3V325 749 aa18.52■□□□□ 0.56
NEK2-201ENST00000366998 MTX1Q13505 466 aa18.52■□□□□ 0.55
NEK2-201ENST00000366998 TTC22Q5TAA0 569 aa18.52■□□□□ 0.55
NEK2-201ENST00000366998 RAB11FIP3O75154 756 aa18.51■□□□□ 0.55
NEK2-201ENST00000366998 GSPT1P15170 499 aaKnown RBP18.51■□□□□ 0.55
NEK2-201ENST00000366998 MEX3CQ5U5Q3 659 aaKnown RBP18.51■□□□□ 0.55
NEK2-201ENST00000366998 DDRGK1Q96HY6 314 aa18.51■□□□□ 0.55
NEK2-201ENST00000366998 ZBTB3Q9H5J0 574 aa18.51■□□□□ 0.55
NEK2-201ENST00000366998 BICC1Q9H694 974 aaKnown RBP18.51■□□□□ 0.55
NEK2-201ENST00000366998 MFAP1P55081 439 aaKnown RBP18.5■□□□□ 0.55
NEK2-201ENST00000366998 MYT1Q01538 1121 aa18.5■□□□□ 0.55
NEK2-201ENST00000366998 FNBP4Q8N3X1 1017 aaPredicted RBP18.5■□□□□ 0.55
NEK2-201ENST00000366998 USP21Q9UK80 565 aa18.5■□□□□ 0.55
NEK2-201ENST00000366998 TJP1Q07157 1748 aa18.5■□□□□ 0.55
NEK2-201ENST00000366998 HSPA1LP34931 641 aa18.5■□□□□ 0.55
NEK2-201ENST00000366998 OS9Q13438 667 aaPredicted RBP18.5■□□□□ 0.55
NEK2-201ENST00000366998 HSP90AB4PQ58FF6 505 aa18.49■□□□□ 0.55
NEK2-201ENST00000366998 KAZALD1Q96I82 304 aa18.49■□□□□ 0.55
NEK2-201ENST00000366998 SLC4A9Q96Q91 983 aa18.49■□□□□ 0.55
NEK2-201ENST00000366998 A0A087WZG4 1122 aa18.48■□□□□ 0.55
NEK2-201ENST00000366998 ERICH6Q7L0X2 663 aa18.48■□□□□ 0.55
NEK2-201ENST00000366998 UBE3BQ7Z3V4 1068 aa18.48■□□□□ 0.55
NEK2-201ENST00000366998 JARID2Q92833 1246 aaPredicted RBP18.48■□□□□ 0.55
NEK2-201ENST00000366998 IL1RAPL2Q9NP60 686 aa18.48■□□□□ 0.55
NEK2-201ENST00000366998 PDE1AP54750 535 aa18.48■□□□□ 0.55
NEK2-201ENST00000366998 KIF6Q6ZMV9 814 aa18.48■□□□□ 0.55
NEK2-201ENST00000366998 KIF1BPQ96EK5 621 aa18.48■□□□□ 0.55
NEK2-201ENST00000366998 NOP58Q9Y2X3 529 aaKnown RBP18.48■□□□□ 0.55
NEK2-201ENST00000366998 CDC45O75419 566 aa18.47■□□□□ 0.55
NEK2-201ENST00000366998 RHPN1Q8TCX5 695 aa18.47■□□□□ 0.55
NEK2-201ENST00000366998 ARXQ96QS3 562 aa18.47■□□□□ 0.55
NEK2-201ENST00000366998 CYP19A1P11511 503 aaPredicted RBP18.46■□□□□ 0.55
NEK2-201ENST00000366998 MX1P20591 662 aa18.46■□□□□ 0.55
NEK2-201ENST00000366998 CWC25Q9NXE8 425 aaPredicted RBP18.46■□□□□ 0.55
NEK2-201ENST00000366998 PA2G4Q9UQ80 394 aaKnown RBP18.46■□□□□ 0.55
NEK2-201ENST00000366998 TBC1D9Q6ZT07 1266 aa18.46■□□□□ 0.54
NEK2-201ENST00000366998 TBC1D32Q96NH3 1257 aa18.46■□□□□ 0.54
NEK2-201ENST00000366998 OSBPL3Q9H4L5 887 aa18.46■□□□□ 0.54
NEK2-201ENST00000366998 SALL3Q9BXA9 1300 aa18.45■□□□□ 0.54
NEK2-201ENST00000366998 EPHA10Q5JZY3 1008 aa18.45■□□□□ 0.54
NEK2-201ENST00000366998 TSHZ3Q63HK5 1081 aa18.44■□□□□ 0.54
NEK2-201ENST00000366998 SDSP20132 328 aa18.43■□□□□ 0.54
NEK2-201ENST00000366998 NUTM1Q86Y26 1132 aa18.43■□□□□ 0.54
NEK2-201ENST00000366998 ZBTB1Q9Y2K1 713 aa18.43■□□□□ 0.54
NEK2-201ENST00000366998 TUBGCP6Q96RT7 1819 aa18.43■□□□□ 0.54
NEK2-201ENST00000366998 ERC1Q8IUD2 1116 aa18.43■□□□□ 0.54
NEK2-201ENST00000366998 CCDC191Q8NCU4 936 aa18.43■□□□□ 0.54
NEK2-201ENST00000366998 C22orf23Q9BZE7 217 aa18.43■□□□□ 0.54
NEK2-201ENST00000366998 COL15A1P39059 1388 aa18.42■□□□□ 0.54
NEK2-201ENST00000366998 THSD7AQ9UPZ6 1657 aa18.42■□□□□ 0.54
NEK2-201ENST00000366998 ATP6V1AP38606 617 aa18.42■□□□□ 0.54
NEK2-201ENST00000366998 G3BP1Q13283 466 aaKnown RBP eCLIP18.42■□□□□ 0.54
NEK2-201ENST00000366998 RTL5Q5HYW3 569 aaPredicted RBP18.42■□□□□ 0.54
NEK2-201ENST00000366998 PALLDQ8WX93 1383 aa18.42■□□□□ 0.54
NEK2-201ENST00000366998 H7C1W4 665 aa18.41■□□□□ 0.54
NEK2-201ENST00000366998 KCNQ2O43526 872 aa18.41■□□□□ 0.54
NEK2-201ENST00000366998 CASP7P55210 303 aa18.41■□□□□ 0.54
NEK2-201ENST00000366998 TCIRG1Q13488 830 aa18.41■□□□□ 0.54
NEK2-201ENST00000366998 STAP2Q9UGK3 403 aa18.41■□□□□ 0.54
NEK2-201ENST00000366998 AFF2P51816 1311 aa18.41■□□□□ 0.54
NEK2-201ENST00000366998 MAP3K15Q6ZN16 1313 aa18.41■□□□□ 0.54
NEK2-201ENST00000366998 LOC102724428A0A0B4J2F2 783 aa18.41■□□□□ 0.54
NEK2-201ENST00000366998 SIK1P57059 783 aa18.41■□□□□ 0.54
NEK2-201ENST00000366998 SMARCC1Q92922 1105 aaPredicted RBP18.41■□□□□ 0.54
NEK2-201ENST00000366998 SIL1Q9H173 461 aa18.41■□□□□ 0.54
NEK2-201ENST00000366998 DAXXQ9UER7 740 aaPredicted RBP18.41■□□□□ 0.54
NEK2-201ENST00000366998 ANKRD36CQ5JPF3 1778 aa18.4■□□□□ 0.54
NEK2-201ENST00000366998 CASC1Q6TDU7 716 aa18.4■□□□□ 0.54
NEK2-201ENST00000366998 CLASRPQ8N2M8 674 aaKnown RBP18.4■□□□□ 0.54
NEK2-201ENST00000366998 ISCA1Q9BUE6 129 aa18.4■□□□□ 0.54
NEK2-201ENST00000366998 AOX1Q06278 1338 aa18.4■□□□□ 0.54
NEK2-201ENST00000366998 RABL6Q3YEC7 729 aaPredicted RBP18.39■□□□□ 0.54
NEK2-201ENST00000366998 KLHDC4Q8TBB5 520 aa18.39■□□□□ 0.54
NEK2-201ENST00000366998 AK9Q5TCS8 1911 aa18.39■□□□□ 0.54
NEK2-201ENST00000366998 NUP98P52948 1817 aa18.39■□□□□ 0.53
NEK2-201ENST00000366998 IL6STP40189 918 aaPredicted RBP18.39■□□□□ 0.53
NEK2-201ENST00000366998 CHMP3Q9Y3E7 222 aa18.39■□□□□ 0.53
NEK2-201ENST00000366998 CICQ96RK0 1608 aaPredicted RBP18.39■□□□□ 0.53
NEK2-201ENST00000366998 LMBR1LQ6UX01 489 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms