RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 SMARCA5O60264 1052 aaPredicted RBP17.88■□□□□ 0.45
UBAP1-202ENST00000359544 MARF1Q9Y4F3 1742 aaKnown RBP17.88■□□□□ 0.45
UBAP1-202ENST00000359544 RPAP1Q9BWH6 1393 aaPredicted RBP17.87■□□□□ 0.45
UBAP1-202ENST00000359544 RXRBP28702 533 aa17.87■□□□□ 0.45
UBAP1-202ENST00000359544 UNC5CLQ8IV45 518 aa17.87■□□□□ 0.45
UBAP1-202ENST00000359544 IL17RAQ96F46 866 aa17.87■□□□□ 0.45
UBAP1-202ENST00000359544 KCNF1Q9H3M0 494 aa17.87■□□□□ 0.45
UBAP1-202ENST00000359544 PYCARDQ9ULZ3 195 aa17.87■□□□□ 0.45
UBAP1-202ENST00000359544 SLIT2O94813 1529 aa17.87■□□□□ 0.45
UBAP1-202ENST00000359544 HMMRO75330 724 aa17.87■□□□□ 0.45
UBAP1-202ENST00000359544 ESYT1Q9BSJ8 1104 aa17.87■□□□□ 0.45
UBAP1-202ENST00000359544 THUMPD2Q9BTF0 503 aaKnown RBP17.87■□□□□ 0.45
UBAP1-202ENST00000359544 KIF20BQ96Q89 1820 aa17.86■□□□□ 0.45
UBAP1-202ENST00000359544 CGNQ9P2M7 1197 aaKnown RBP17.86■□□□□ 0.45
UBAP1-202ENST00000359544 PLCB2Q00722 1185 aa17.86■□□□□ 0.45
UBAP1-202ENST00000359544 FOXD4L6Q3SYB3 417 aaPredicted RBP17.86■□□□□ 0.45
UBAP1-202ENST00000359544 FOXD4L3Q6VB84 417 aaPredicted RBP17.86■□□□□ 0.45
UBAP1-202ENST00000359544 AXIN2Q9Y2T1 843 aa17.86■□□□□ 0.45
UBAP1-202ENST00000359544 PDE1AP54750 535 aa17.85■□□□□ 0.45
UBAP1-202ENST00000359544 C8orf58Q8NAV2 365 aa17.85■□□□□ 0.45
UBAP1-202ENST00000359544 SRCIN1Q9C0H9 1055 aa17.85■□□□□ 0.45
UBAP1-202ENST00000359544 APBB1O00213 710 aa17.84■□□□□ 0.45
UBAP1-202ENST00000359544 PDE4CQ08493 712 aa17.84■□□□□ 0.45
UBAP1-202ENST00000359544 NCBP1Q09161 790 aaKnown RBP17.84■□□□□ 0.45
UBAP1-202ENST00000359544 FUCA2Q9BTY2 467 aa17.84■□□□□ 0.45
UBAP1-202ENST00000359544 TRPC5Q9UL62 973 aaPredicted RBP17.84■□□□□ 0.45
UBAP1-202ENST00000359544 ATP6V1DQ9Y5K8 247 aa17.84■□□□□ 0.45
UBAP1-202ENST00000359544 EP400Q96L91 3159 aa17.84■□□□□ 0.45
UBAP1-202ENST00000359544 SMTNL1A8MU46 457 aa17.84■□□□□ 0.45
UBAP1-202ENST00000359544 NOL8Q76FK4 1167 aaKnown RBP17.84■□□□□ 0.45
UBAP1-202ENST00000359544 PLCH1Q4KWH8 1693 aa17.84■□□□□ 0.45
UBAP1-202ENST00000359544 TMEM51Q9NW97 253 aa17.83■□□□□ 0.45
UBAP1-202ENST00000359544 CTNNA3Q9UI47 895 aa17.83■□□□□ 0.45
UBAP1-202ENST00000359544 PHACTR3Q96KR7 559 aa17.83■□□□□ 0.44
UBAP1-202ENST00000359544 CNPY2Q9Y2B0 182 aa17.83■□□□□ 0.44
UBAP1-202ENST00000359544 CCDC66A2RUB6 948 aa17.82■□□□□ 0.44
UBAP1-202ENST00000359544 EPB41L2O43491 1005 aaKnown RBP17.82■□□□□ 0.44
UBAP1-202ENST00000359544 ZSCAN22P10073 491 aaPredicted RBP17.82■□□□□ 0.44
UBAP1-202ENST00000359544 COG3Q96JB2 828 aa17.82■□□□□ 0.44
UBAP1-202ENST00000359544 GJD4Q96KN9 370 aaPredicted RBP17.82■□□□□ 0.44
UBAP1-202ENST00000359544 DDX41Q9UJV9 622 aaKnown RBP17.82■□□□□ 0.44
UBAP1-202ENST00000359544 PALD1Q9ULE6 856 aa17.82■□□□□ 0.44
UBAP1-202ENST00000359544 SLIT3O75094 1523 aa17.82■□□□□ 0.44
UBAP1-202ENST00000359544 RBM6P78332 1123 aaKnown RBP17.81■□□□□ 0.44
UBAP1-202ENST00000359544 LARP1Q6PKG0 1096 aaKnown RBP17.81■□□□□ 0.44
UBAP1-202ENST00000359544 ANO2Q9NQ90 1003 aa17.81■□□□□ 0.44
UBAP1-202ENST00000359544 ATRNO75882 1429 aa17.81■□□□□ 0.44
UBAP1-202ENST00000359544 CAMTA1Q9Y6Y1 1673 aa17.81■□□□□ 0.44
UBAP1-202ENST00000359544 IGSF3O75054 1194 aa17.81■□□□□ 0.44
UBAP1-202ENST00000359544 EVA1CP58658 441 aa17.81■□□□□ 0.44
UBAP1-202ENST00000359544 RRS1Q15050 365 aaKnown RBP17.81■□□□□ 0.44
UBAP1-202ENST00000359544 ARHGEF25Q86VW2 580 aa17.8■□□□□ 0.44
UBAP1-202ENST00000359544 PAXBP1Q9Y5B6 917 aa17.8■□□□□ 0.44
UBAP1-202ENST00000359544 PTPRCP08575 1304 aa17.8■□□□□ 0.44
UBAP1-202ENST00000359544 USP31Q70CQ4 1352 aa17.8■□□□□ 0.44
UBAP1-202ENST00000359544 CCDC192P0DO97 292 aa17.8■□□□□ 0.44
UBAP1-202ENST00000359544 SPC24Q8NBT2 197 aa17.8■□□□□ 0.44
UBAP1-202ENST00000359544 MORC2Q9Y6X9 1032 aaPredicted RBP17.8■□□□□ 0.44
UBAP1-202ENST00000359544 OVOS2A0A0J9YW53 1432 aa17.8■□□□□ 0.44
UBAP1-202ENST00000359544 OVOS2Q6IE36 1432 aa17.8■□□□□ 0.44
UBAP1-202ENST00000359544 TCHHQ07283 1943 aa17.8■□□□□ 0.44
UBAP1-202ENST00000359544 HMOX1P09601 288 aa17.79■□□□□ 0.44
UBAP1-202ENST00000359544 KCNH5Q8NCM2 988 aa17.79■□□□□ 0.44
UBAP1-202ENST00000359544 A0A0G2JS52 829 aa17.79■□□□□ 0.44
UBAP1-202ENST00000359544 FAM98CQ17RN3 349 aaKnown RBP17.79■□□□□ 0.44
UBAP1-202ENST00000359544 GIMAP6Q6P9H5 292 aa17.79■□□□□ 0.44
UBAP1-202ENST00000359544 COL14A1Q05707 1796 aaKnown RBP17.79■□□□□ 0.44
UBAP1-202ENST00000359544 TUBGCP6Q96RT7 1819 aa17.79■□□□□ 0.44
UBAP1-202ENST00000359544 AP5Z1O43299 807 aa17.78■□□□□ 0.44
UBAP1-202ENST00000359544 CPDO75976 1380 aa17.78■□□□□ 0.44
UBAP1-202ENST00000359544 NFAT5O94916 1531 aa17.78■□□□□ 0.44
UBAP1-202ENST00000359544 SLFN14P0C7P3 912 aa17.78■□□□□ 0.44
UBAP1-202ENST00000359544 CDK11BP21127 795 aaKnown RBP17.78■□□□□ 0.44
UBAP1-202ENST00000359544 CHMLP26374 656 aa17.78■□□□□ 0.44
UBAP1-202ENST00000359544 VPS72Q15906 364 aa17.78■□□□□ 0.44
UBAP1-202ENST00000359544 STX6O43752 255 aa17.77■□□□□ 0.44
UBAP1-202ENST00000359544 LTV1Q96GA3 475 aaPredicted RBP17.77■□□□□ 0.44
UBAP1-202ENST00000359544 POLKQ9UBT6 870 aa17.77■□□□□ 0.44
UBAP1-202ENST00000359544 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.77■□□□□ 0.44
UBAP1-202ENST00000359544 F13A1P00488 732 aa17.77■□□□□ 0.44
UBAP1-202ENST00000359544 MEIS3Q99687 375 aa17.77■□□□□ 0.44
UBAP1-202ENST00000359544 UPF3BQ9BZI7 483 aaKnown RBP17.77■□□□□ 0.44
UBAP1-202ENST00000359544 DLG5Q8TDM6 1919 aa17.77■□□□□ 0.43
UBAP1-202ENST00000359544 CCDC112Q8NEF3 446 aa17.76■□□□□ 0.43
UBAP1-202ENST00000359544 GLI3P10071 1580 aa17.76■□□□□ 0.43
UBAP1-202ENST00000359544 FIBPO43427 364 aa17.76■□□□□ 0.43
UBAP1-202ENST00000359544 PTGS1P23219 599 aa17.76■□□□□ 0.43
UBAP1-202ENST00000359544 FAM193AP78312 1265 aa17.76■□□□□ 0.43
UBAP1-202ENST00000359544 FAM200AQ8TCP9 573 aa17.76■□□□□ 0.43
UBAP1-202ENST00000359544 SALL3Q9BXA9 1300 aa17.75■□□□□ 0.43
UBAP1-202ENST00000359544 NRAPQ86VF7 1730 aa17.75■□□□□ 0.43
UBAP1-202ENST00000359544 KRT222Q8N1A0 295 aa17.75■□□□□ 0.43
UBAP1-202ENST00000359544 MAP3K19Q56UN5 1328 aa17.75■□□□□ 0.43
UBAP1-202ENST00000359544 TNNT1P13805 278 aa17.75■□□□□ 0.43
UBAP1-202ENST00000359544 FAM182BQ5T319 152 aa17.75■□□□□ 0.43
UBAP1-202ENST00000359544 KIF18AQ8NI77 898 aa17.75■□□□□ 0.43
UBAP1-202ENST00000359544 CSB-PGBD3P0DP91 1061 aa17.74■□□□□ 0.43
UBAP1-202ENST00000359544 TERF2Q15554 542 aa17.74■□□□□ 0.43
UBAP1-202ENST00000359544 AATKQ6ZMQ8 1374 aa17.74■□□□□ 0.43
UBAP1-202ENST00000359544 TRIM6-TRIM34B2RNG4 842 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms