RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 FAM200AQ8TCP9 573 aa17.15■□□□□ 0.34
APP-205ENST00000358918 STAP2Q9UGK3 403 aa17.15■□□□□ 0.34
APP-205ENST00000358918 LIMCH1Q9UPQ0 1083 aa17.14■□□□□ 0.33
APP-205ENST00000358918 RGPD1P0DJD0 1748 aa17.14■□□□□ 0.33
APP-205ENST00000358918 GTF2E1P29083 439 aaPredicted RBP17.14■□□□□ 0.33
APP-205ENST00000358918 C16orf45Q96MC5 204 aaPredicted RBP17.14■□□□□ 0.33
APP-205ENST00000358918 EYA1Q99502 592 aa17.14■□□□□ 0.33
APP-205ENST00000358918 DDX41Q9UJV9 622 aaKnown RBP17.14■□□□□ 0.33
APP-205ENST00000358918 ARHGEF10O15013 1369 aa17.13■□□□□ 0.33
APP-205ENST00000358918 PAXBP1Q9Y5B6 917 aa17.13■□□□□ 0.33
APP-205ENST00000358918 AK2P54819 239 aa17.13■□□□□ 0.33
APP-205ENST00000358918 DNM1Q05193 864 aaKnown RBP17.13■□□□□ 0.33
APP-205ENST00000358918 AOX1Q06278 1338 aa17.12■□□□□ 0.33
APP-205ENST00000358918 ADGRL3Q9HAR2 1447 aa17.12■□□□□ 0.33
APP-205ENST00000358918 FOXO3O43524 673 aa17.12■□□□□ 0.33
APP-205ENST00000358918 TNNT1P13805 278 aa17.12■□□□□ 0.33
APP-205ENST00000358918 UNC5CLQ8IV45 518 aa17.12■□□□□ 0.33
APP-205ENST00000358918 DRC7Q8IY82 874 aa17.12■□□□□ 0.33
APP-205ENST00000358918 CCDC112Q8NEF3 446 aa17.12■□□□□ 0.33
APP-205ENST00000358918 TTC14Q96N46 770 aa17.12■□□□□ 0.33
APP-205ENST00000358918 HOXC9P31274 260 aa17.11■□□□□ 0.33
APP-205ENST00000358918 CCDC186Q7Z3E2 898 aa17.11■□□□□ 0.33
APP-205ENST00000358918 RAD50Q92878 1312 aa17.11■□□□□ 0.33
APP-205ENST00000358918 F6X3S4 739 aa17.11■□□□□ 0.33
APP-205ENST00000358918 PSME1Q06323 249 aa17.11■□□□□ 0.33
APP-205ENST00000358918 MTHFSDQ2M296 383 aaKnown RBP17.11■□□□□ 0.33
APP-205ENST00000358918 RUFY3Q7L099 469 aa17.11■□□□□ 0.33
APP-205ENST00000358918 LTV1Q96GA3 475 aaPredicted RBP17.11■□□□□ 0.33
APP-205ENST00000358918 SNX14Q9Y5W7 946 aa17.11■□□□□ 0.33
APP-205ENST00000358918 MORC2Q9Y6X9 1032 aaPredicted RBP17.11■□□□□ 0.33
APP-205ENST00000358918 MAP3K11Q16584 847 aa17.1■□□□□ 0.33
APP-205ENST00000358918 TUBGCP6Q96RT7 1819 aa17.1■□□□□ 0.33
APP-205ENST00000358918 RTF1Q92541 710 aaKnown RBP17.1■□□□□ 0.33
APP-205ENST00000358918 IL25Q9H293 177 aa17.1■□□□□ 0.33
APP-205ENST00000358918 MARF1Q9Y4F3 1742 aaKnown RBP17.09■□□□□ 0.33
APP-205ENST00000358918 IGSF1Q8N6C5 1336 aa17.09■□□□□ 0.33
APP-205ENST00000358918 GNAI3P08754 354 aa17.09■□□□□ 0.33
APP-205ENST00000358918 SLFN14P0C7P3 912 aa17.09■□□□□ 0.33
APP-205ENST00000358918 TYRO3Q06418 890 aa17.09■□□□□ 0.33
APP-205ENST00000358918 NUP62CLQ9H1M0 184 aa17.09■□□□□ 0.33
APP-205ENST00000358918 TMEM51Q9NW97 253 aa17.09■□□□□ 0.33
APP-205ENST00000358918 GJB2P29033 226 aa17.09■□□□□ 0.33
APP-205ENST00000358918 LRMPQ12912 555 aa17.09■□□□□ 0.33
APP-205ENST00000358918 LUZP1Q86V48 1076 aa17.09■□□□□ 0.33
APP-205ENST00000358918 KIF18AQ8NI77 898 aa17.09■□□□□ 0.33
APP-205ENST00000358918 LARP6Q9BRS8 491 aaKnown RBP17.09■□□□□ 0.33
APP-205ENST00000358918 MTMR6Q9Y217 621 aa17.09■□□□□ 0.33
APP-205ENST00000358918 MRVI1Q9Y6F6 885 aa17.09■□□□□ 0.33
APP-205ENST00000358918 CCDC66A2RUB6 948 aa17.08■□□□□ 0.33
APP-205ENST00000358918 ATP8B2P98198 1209 aa17.08■□□□□ 0.33
APP-205ENST00000358918 TPD52L1Q16890 204 aaPredicted RBP17.08■□□□□ 0.33
APP-205ENST00000358918 ZSCAN25Q6NSZ9 544 aa17.08■□□□□ 0.33
APP-205ENST00000358918 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.08■□□□□ 0.33
APP-205ENST00000358918 ORAI2Q96SN7 254 aa17.08■□□□□ 0.33
APP-205ENST00000358918 KDRP35968 1356 aa17.08■□□□□ 0.32
APP-205ENST00000358918 PNMA6EA0A0J9YXQ4 647 aa17.08■□□□□ 0.32
APP-205ENST00000358918 G2E3Q7L622 706 aa17.08■□□□□ 0.32
APP-205ENST00000358918 KRT222Q8N1A0 295 aa17.08■□□□□ 0.32
APP-205ENST00000358918 TCHHQ07283 1943 aa17.07■□□□□ 0.32
APP-205ENST00000358918 SGSM2O43147 1006 aa17.07■□□□□ 0.32
APP-205ENST00000358918 CCDC83Q8IWF9 413 aa17.07■□□□□ 0.32
APP-205ENST00000358918 VPS37CA5D8V6 355 aaPredicted RBP17.07■□□□□ 0.32
APP-205ENST00000358918 ZNF75DP51815 510 aa17.07■□□□□ 0.32
APP-205ENST00000358918 TRIM5Q9C035 493 aa17.07■□□□□ 0.32
APP-205ENST00000358918 MIS18AQ9NYP9 233 aa17.07■□□□□ 0.32
APP-205ENST00000358918 PROSER2Q86WR7 435 aaPredicted RBP17.06■□□□□ 0.32
APP-205ENST00000358918 ZNF397Q8NF99 534 aaPredicted RBP17.06■□□□□ 0.32
APP-205ENST00000358918 CBX8Q9HC52 389 aa17.06■□□□□ 0.32
APP-205ENST00000358918 NAA30Q147X3 362 aaPredicted RBP17.06■□□□□ 0.32
APP-205ENST00000358918 TERF2Q15554 542 aa17.06■□□□□ 0.32
APP-205ENST00000358918 PLA2G4DQ86XP0 818 aa17.06■□□□□ 0.32
APP-205ENST00000358918 LSG1Q9H089 658 aaKnown RBP17.06■□□□□ 0.32
APP-205ENST00000358918 KRT85P78386 507 aa17.05■□□□□ 0.32
APP-205ENST00000358918 CAMK4Q16566 473 aa17.05■□□□□ 0.32
APP-205ENST00000358918 ANO6Q4KMQ2 910 aa17.05■□□□□ 0.32
APP-205ENST00000358918 CEP135Q66GS9 1140 aa17.05■□□□□ 0.32
APP-205ENST00000358918 RASEFQ8IZ41 740 aa17.05■□□□□ 0.32
APP-205ENST00000358918 NRBP1Q9UHY1 535 aa17.05■□□□□ 0.32
APP-205ENST00000358918 CASTP20810 708 aaKnown RBP17.04■□□□□ 0.32
APP-205ENST00000358918 CDK11BP21127 795 aaKnown RBP17.04■□□□□ 0.32
APP-205ENST00000358918 USHBP1Q8N6Y0 703 aa17.04■□□□□ 0.32
APP-205ENST00000358918 ZSCAN31Q96LW9 406 aaPredicted RBP17.04■□□□□ 0.32
APP-205ENST00000358918 TNMDQ9H2S6 317 aa17.04■□□□□ 0.32
APP-205ENST00000358918 CHMP3Q9Y3E7 222 aa17.04■□□□□ 0.32
APP-205ENST00000358918 CRB1P82279 1406 aa17.04■□□□□ 0.32
APP-205ENST00000358918 LARGE1O95461 756 aa17.04■□□□□ 0.32
APP-205ENST00000358918 MAP4K4O95819 1239 aaPredicted RBP17.04■□□□□ 0.32
APP-205ENST00000358918 ZNF592Q92610 1267 aa17.04■□□□□ 0.32
APP-205ENST00000358918 SH2B1Q9NRF2 756 aaPredicted RBP17.04■□□□□ 0.32
APP-205ENST00000358918 HYPKQ9NX55 129 aa17.04■□□□□ 0.32
APP-205ENST00000358918 USP54Q70EL1 1684 aa17.04■□□□□ 0.32
APP-205ENST00000358918 IL1RAPL2Q9NP60 686 aa17.03■□□□□ 0.32
APP-205ENST00000358918 CLIP2Q9UDT6 1046 aa17.03■□□□□ 0.32
APP-205ENST00000358918 LIG1P18858 919 aa17.03■□□□□ 0.32
APP-205ENST00000358918 NUTM1Q86Y26 1132 aa17.03■□□□□ 0.32
APP-205ENST00000358918 CKAP2LQ8IYA6 745 aa17.03■□□□□ 0.32
APP-205ENST00000358918 TDRD7Q8NHU6 1098 aaKnown RBP17.03■□□□□ 0.32
APP-205ENST00000358918 STK31Q9BXU1 1019 aa17.03■□□□□ 0.32
APP-205ENST00000358918 PDRG1Q9NUG6 133 aa17.03■□□□□ 0.32
APP-205ENST00000358918 ELP1O95163 1332 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms