RNA–Protein interactions for RNA: ENST00000358598.6

PRKAR1A-201, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-201ENST00000358598 NAP1L2Q9ULW6 460 aaPredicted RBP13.24□□□□□ -0.29
PRKAR1A-201ENST00000358598 CEMIPQ8WUJ3 1361 aa13.24□□□□□ -0.29
PRKAR1A-201ENST00000358598 A0A087WZG4 1122 aa13.24□□□□□ -0.29
PRKAR1A-201ENST00000358598 SNRPA1P09661 255 aaKnown RBP13.24□□□□□ -0.29
PRKAR1A-201ENST00000358598 FMNL2Q96PY5 1086 aa13.24□□□□□ -0.29
PRKAR1A-201ENST00000358598 IL25Q9H293 177 aa13.24□□□□□ -0.29
PRKAR1A-201ENST00000358598 RBM27Q9P2N5 1060 aaKnown RBP13.24□□□□□ -0.29
PRKAR1A-201ENST00000358598 STAP2Q9UGK3 403 aa13.24□□□□□ -0.29
PRKAR1A-201ENST00000358598 VIRMAQ69YN4 1812 aaKnown RBP13.23□□□□□ -0.29
PRKAR1A-201ENST00000358598 PHKG2P15735 406 aa13.23□□□□□ -0.29
PRKAR1A-201ENST00000358598 CCDC85AQ96PX6 553 aaPredicted RBP13.23□□□□□ -0.29
PRKAR1A-201ENST00000358598 TAOK2Q9UL54 1235 aa13.23□□□□□ -0.29
PRKAR1A-201ENST00000358598 ADCY9O60503 1353 aa13.23□□□□□ -0.29
PRKAR1A-201ENST00000358598 ZBTB3Q9H5J0 574 aa13.22□□□□□ -0.29
PRKAR1A-201ENST00000358598 SMC3Q9UQE7 1217 aa13.22□□□□□ -0.29
PRKAR1A-201ENST00000358598 POLA2Q14181 598 aa13.22□□□□□ -0.29
PRKAR1A-201ENST00000358598 SYTL4Q96C24 671 aaPredicted RBP13.22□□□□□ -0.29
PRKAR1A-201ENST00000358598 NDUFB9Q9Y6M9 179 aa13.22□□□□□ -0.29
PRKAR1A-201ENST00000358598 RNF214Q8ND24 703 aa13.22□□□□□ -0.29
PRKAR1A-201ENST00000358598 TCEANC2Q96MN5 208 aa13.22□□□□□ -0.29
PRKAR1A-201ENST00000358598 DDIT3P35638 169 aa13.21□□□□□ -0.29
PRKAR1A-201ENST00000358598 NASPP49321 788 aaPredicted RBP13.21□□□□□ -0.29
PRKAR1A-201ENST00000358598 PI4K2BQ8TCG2 481 aa13.21□□□□□ -0.29
PRKAR1A-201ENST00000358598 VPS37CA5D8V6 355 aaPredicted RBP13.21□□□□□ -0.29
PRKAR1A-201ENST00000358598 SGSM2O43147 1006 aa13.21□□□□□ -0.29
PRKAR1A-201ENST00000358598 GAS2L3Q86XJ1 694 aa13.21□□□□□ -0.29
PRKAR1A-201ENST00000358598 PLCB2Q00722 1185 aa13.21□□□□□ -0.3
PRKAR1A-201ENST00000358598 TOPAZ1Q8N9V7 1692 aa13.2□□□□□ -0.3
PRKAR1A-201ENST00000358598 EAF2Q96CJ1 260 aaPredicted RBP13.2□□□□□ -0.3
PRKAR1A-201ENST00000358598 EDC3Q96F86 508 aaKnown RBP13.2□□□□□ -0.3
PRKAR1A-201ENST00000358598 DCAF5Q96JK2 942 aa13.2□□□□□ -0.3
PRKAR1A-201ENST00000358598 GORABQ5T7V8 394 aa13.2□□□□□ -0.3
PRKAR1A-201ENST00000358598 CCDC83Q8IWF9 413 aa13.2□□□□□ -0.3
PRKAR1A-201ENST00000358598 TLR7Q9NYK1 1049 aaKnown RBP13.2□□□□□ -0.3
PRKAR1A-201ENST00000358598 PXDNQ92626 1479 aa13.2□□□□□ -0.3
PRKAR1A-201ENST00000358598 ANAPC15P60006 121 aa13.2□□□□□ -0.3
PRKAR1A-201ENST00000358598 KLHL40Q2TBA0 621 aa13.2□□□□□ -0.3
PRKAR1A-201ENST00000358598 RASEFQ8IZ41 740 aa13.2□□□□□ -0.3
PRKAR1A-201ENST00000358598 FAM227BQ96M60 508 aa13.2□□□□□ -0.3
PRKAR1A-201ENST00000358598 CYP27B1O15528 508 aa13.19□□□□□ -0.3
PRKAR1A-201ENST00000358598 NAP1L5Q96NT1 182 aaPredicted RBP13.19□□□□□ -0.3
PRKAR1A-201ENST00000358598 NEURL1BA8MQ27 555 aa13.19□□□□□ -0.3
PRKAR1A-201ENST00000358598 GCKRQ14397 625 aa13.19□□□□□ -0.3
PRKAR1A-201ENST00000358598 TAF7LQ5H9L4 462 aa13.19□□□□□ -0.3
PRKAR1A-201ENST00000358598 EVI5LQ96CN4 794 aa13.19□□□□□ -0.3
PRKAR1A-201ENST00000358598 PDRG1Q9NUG6 133 aa13.19□□□□□ -0.3
PRKAR1A-201ENST00000358598 SNX14Q9Y5W7 946 aa13.19□□□□□ -0.3
PRKAR1A-201ENST00000358598 CYP46A1Q9Y6A2 500 aa13.19□□□□□ -0.3
PRKAR1A-201ENST00000358598 IGKV5-2P06315 115 aa13.19□□□□□ -0.3
PRKAR1A-201ENST00000358598 AK2P54819 239 aa13.19□□□□□ -0.3
PRKAR1A-201ENST00000358598 STK3Q13188 491 aa13.19□□□□□ -0.3
PRKAR1A-201ENST00000358598 C1orf167Q5SNV9 1468 aa13.18□□□□□ -0.3
PRKAR1A-201ENST00000358598 SALL3Q9BXA9 1300 aa13.18□□□□□ -0.3
PRKAR1A-201ENST00000358598 SYCE3A1L190 88 aa13.18□□□□□ -0.3
PRKAR1A-201ENST00000358598 FIBPO43427 364 aa13.18□□□□□ -0.3
PRKAR1A-201ENST00000358598 PTH1RQ03431 593 aa13.18□□□□□ -0.3
PRKAR1A-201ENST00000358598 ZCRB1Q8TBF4 217 aaKnown RBP13.18□□□□□ -0.3
PRKAR1A-201ENST00000358598 TTC41PQ6P2S7 1318 aa13.18□□□□□ -0.3
PRKAR1A-201ENST00000358598 HSP90B1P14625 803 aaKnown RBP13.18□□□□□ -0.3
PRKAR1A-201ENST00000358598 HSPA4P34932 840 aa13.18□□□□□ -0.3
PRKAR1A-201ENST00000358598 NMIQ13287 307 aaPredicted RBP13.18□□□□□ -0.3
PRKAR1A-201ENST00000358598 LMBR1LQ6UX01 489 aa13.18□□□□□ -0.3
PRKAR1A-201ENST00000358598 A1BGP04217 495 aa13.17□□□□□ -0.3
PRKAR1A-201ENST00000358598 EPHA10Q5JZY3 1008 aa13.17□□□□□ -0.3
PRKAR1A-201ENST00000358598 METTL22Q9BUU2 404 aaPredicted RBP13.17□□□□□ -0.3
PRKAR1A-201ENST00000358598 NCOA3Q9Y6Q9 1424 aa13.17□□□□□ -0.3
PRKAR1A-201ENST00000358598 RAD50Q92878 1312 aa13.17□□□□□ -0.3
PRKAR1A-201ENST00000358598 NECAB1Q8N987 351 aa13.17□□□□□ -0.3
PRKAR1A-201ENST00000358598 KAT6BQ8WYB5 2073 aa13.17□□□□□ -0.3
PRKAR1A-201ENST00000358598 AOX1Q06278 1338 aa13.17□□□□□ -0.3
PRKAR1A-201ENST00000358598 SASH1O94885 1247 aa13.17□□□□□ -0.3
PRKAR1A-201ENST00000358598 TFCP2Q12800 502 aa13.17□□□□□ -0.3
PRKAR1A-201ENST00000358598 FAM43AQ8N2R8 423 aa13.17□□□□□ -0.3
PRKAR1A-201ENST00000358598 LIMCH1Q9UPQ0 1083 aa13.17□□□□□ -0.3
PRKAR1A-201ENST00000358598 FSD2A1L4K1 749 aa13.16□□□□□ -0.3
PRKAR1A-201ENST00000358598 PTMAP06454 111 aaKnown RBP13.16□□□□□ -0.3
PRKAR1A-201ENST00000358598 RNF20Q5VTR2 975 aa13.16□□□□□ -0.3
PRKAR1A-201ENST00000358598 LMBRD1Q9NUN5 540 aa13.16□□□□□ -0.3
PRKAR1A-201ENST00000358598 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.16□□□□□ -0.3
PRKAR1A-201ENST00000358598 RBM8AQ9Y5S9 174 aaKnown RBP13.16□□□□□ -0.3
PRKAR1A-201ENST00000358598 ZSCAN23Q3MJ62 389 aa13.16□□□□□ -0.3
PRKAR1A-201ENST00000358598 DDX46Q7L014 1031 aaKnown RBP13.16□□□□□ -0.3
PRKAR1A-201ENST00000358598 WDR33Q9C0J8 1336 aaKnown RBP13.16□□□□□ -0.3
PRKAR1A-201ENST00000358598 FOSBP53539 338 aa13.15□□□□□ -0.3
PRKAR1A-201ENST00000358598 FERMT3Q86UX7 667 aa13.15□□□□□ -0.3
PRKAR1A-201ENST00000358598 ZDHHC9Q9Y397 364 aa13.15□□□□□ -0.3
PRKAR1A-201ENST00000358598 XRN1Q8IZH2 1706 aaKnown RBP13.15□□□□□ -0.3
PRKAR1A-201ENST00000358598 PDIA6Q15084 440 aa13.15□□□□□ -0.3
PRKAR1A-201ENST00000358598 TTLL7Q6ZT98 887 aa13.15□□□□□ -0.3
PRKAR1A-201ENST00000358598 LSG1Q9H089 658 aaKnown RBP13.15□□□□□ -0.3
PRKAR1A-201ENST00000358598 NALCNQ8IZF0 1738 aa13.14□□□□□ -0.31
PRKAR1A-201ENST00000358598 HIP1O00291 1037 aa13.14□□□□□ -0.31
PRKAR1A-201ENST00000358598 ADCK5Q3MIX3 580 aa13.14□□□□□ -0.31
PRKAR1A-201ENST00000358598 SYAP1Q96A49 352 aaPredicted RBP13.14□□□□□ -0.31
PRKAR1A-201ENST00000358598 NWD1Q149M9 1564 aa13.14□□□□□ -0.31
PRKAR1A-201ENST00000358598 RGPD1P0DJD0 1748 aa13.14□□□□□ -0.31
PRKAR1A-201ENST00000358598 BLOC1S2Q6QNY1 142 aa13.14□□□□□ -0.31
PRKAR1A-201ENST00000358598 ANO8Q9HCE9 1232 aaPredicted RBP13.14□□□□□ -0.31
PRKAR1A-201ENST00000358598 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.14□□□□□ -0.31
PRKAR1A-201ENST00000358598 FMN2Q9NZ56 1722 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms