RNA–Protein interactions for RNA: ENST00000357632.6

CCR9-202, Transcript of C-C motif chemokine receptor 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR9, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-202ENST00000357632 TJP1Q07157 1748 aa12.87□□□□□ -0.35
CCR9-202ENST00000357632 NBPF26B4DH59 902 aa12.86□□□□□ -0.35
CCR9-202ENST00000357632 NBPF14Q5TI25 921 aa12.86□□□□□ -0.35
CCR9-202ENST00000357632 NBPF10Q6P3W6 841 aaKnown RBP12.86□□□□□ -0.35
CCR9-202ENST00000357632 PPP1R42Q7Z4L9 355 aa12.86□□□□□ -0.35
CCR9-202ENST00000357632 NBPF15Q8N660 670 aa12.86□□□□□ -0.35
CCR9-202ENST00000357632 MYD88Q99836 296 aa12.86□□□□□ -0.35
CCR9-202ENST00000357632 IGKV5-2P06315 115 aa12.86□□□□□ -0.35
CCR9-202ENST00000357632 PLEKHM2Q8IWE5 1019 aa12.86□□□□□ -0.35
CCR9-202ENST00000357632 ASAP1Q9ULH1 1129 aa12.86□□□□□ -0.35
CCR9-202ENST00000357632 RREB1Q92766 1687 aa12.86□□□□□ -0.35
CCR9-202ENST00000357632 PNMA6EA0A0J9YXQ4 647 aa12.85□□□□□ -0.35
CCR9-202ENST00000357632 HSP90AB3PQ58FF7 597 aa12.85□□□□□ -0.35
CCR9-202ENST00000357632 CCDC191Q8NCU4 936 aa12.85□□□□□ -0.35
CCR9-202ENST00000357632 KIF1BPQ96EK5 621 aa12.85□□□□□ -0.35
CCR9-202ENST00000357632 USP21Q9UK80 565 aa12.85□□□□□ -0.35
CCR9-202ENST00000357632 SRGAP3O43295 1099 aa12.85□□□□□ -0.35
CCR9-202ENST00000357632 TRIM28Q13263 835 aaKnown RBP12.85□□□□□ -0.35
CCR9-202ENST00000357632 MARCH10Q8NA82 808 aaPredicted RBP12.85□□□□□ -0.35
CCR9-202ENST00000357632 PRIM1P49642 420 aaKnown RBP12.84□□□□□ -0.35
CCR9-202ENST00000357632 CWF19L2Q2TBE0 894 aaKnown RBP12.84□□□□□ -0.35
CCR9-202ENST00000357632 KIF6Q6ZMV9 814 aa12.84□□□□□ -0.35
CCR9-202ENST00000357632 IPO9Q96P70 1041 aaKnown RBP12.84□□□□□ -0.35
CCR9-202ENST00000357632 TTC22Q5TAA0 569 aa12.84□□□□□ -0.35
CCR9-202ENST00000357632 RBM42Q9BTD8 480 aaKnown RBP12.84□□□□□ -0.35
CCR9-202ENST00000357632 ANKRD36CQ5JPF3 1778 aa12.84□□□□□ -0.35
CCR9-202ENST00000357632 A1BGP04217 495 aa12.83□□□□□ -0.35
CCR9-202ENST00000357632 IL6STP40189 918 aaPredicted RBP12.83□□□□□ -0.35
CCR9-202ENST00000357632 DNAJC10Q8IXB1 793 aa12.83□□□□□ -0.35
CCR9-202ENST00000357632 KAT6BQ8WYB5 2073 aa12.83□□□□□ -0.36
CCR9-202ENST00000357632 CYP19A1P11511 503 aaPredicted RBP12.83□□□□□ -0.36
CCR9-202ENST00000357632 MEX3CQ5U5Q3 659 aaKnown RBP12.83□□□□□ -0.36
CCR9-202ENST00000357632 CWC25Q9NXE8 425 aaPredicted RBP12.83□□□□□ -0.36
CCR9-202ENST00000357632 SURF6O75683 361 aaKnown RBP12.82□□□□□ -0.36
CCR9-202ENST00000357632 NPM2Q86SE8 214 aaKnown RBP12.82□□□□□ -0.36
CCR9-202ENST00000357632 STAP2Q9UGK3 403 aa12.82□□□□□ -0.36
CCR9-202ENST00000357632 CDC45O75419 566 aa12.82□□□□□ -0.36
CCR9-202ENST00000357632 RABL6Q3YEC7 729 aaPredicted RBP12.82□□□□□ -0.36
CCR9-202ENST00000357632 CASC1Q6TDU7 716 aa12.82□□□□□ -0.36
CCR9-202ENST00000357632 SYTL4Q96C24 671 aaPredicted RBP12.82□□□□□ -0.36
CCR9-202ENST00000357632 EXOC6BQ9Y2D4 811 aa12.82□□□□□ -0.36
CCR9-202ENST00000357632 NHSQ6T4R5 1651 aa12.82□□□□□ -0.36
CCR9-202ENST00000357632 ERVV-1B6SEH8 477 aa12.81□□□□□ -0.36
CCR9-202ENST00000357632 H7C1W4 665 aa12.81□□□□□ -0.36
CCR9-202ENST00000357632 RGL2O15211 777 aa12.81□□□□□ -0.36
CCR9-202ENST00000357632 TCIRG1Q13488 830 aa12.81□□□□□ -0.36
CCR9-202ENST00000357632 SUCLG2Q96I99 432 aa12.81□□□□□ -0.36
CCR9-202ENST00000357632 ATRNO75882 1429 aa12.81□□□□□ -0.36
CCR9-202ENST00000357632 SALL3Q9BXA9 1300 aa12.81□□□□□ -0.36
CCR9-202ENST00000357632 HSPA1LP34931 641 aa12.81□□□□□ -0.36
CCR9-202ENST00000357632 FAM98CQ17RN3 349 aaKnown RBP12.81□□□□□ -0.36
CCR9-202ENST00000357632 RHPN1Q8TCX5 695 aa12.81□□□□□ -0.36
CCR9-202ENST00000357632 ISCA1Q9BUE6 129 aa12.81□□□□□ -0.36
CCR9-202ENST00000357632 TRPC5Q9UL62 973 aaPredicted RBP12.81□□□□□ -0.36
CCR9-202ENST00000357632 MAP3K15Q6ZN16 1313 aa12.81□□□□□ -0.36
CCR9-202ENST00000357632 A0A087WZG4 1122 aa12.8□□□□□ -0.36
CCR9-202ENST00000357632 ONECUT3O60422 494 aaPredicted RBP12.8□□□□□ -0.36
CCR9-202ENST00000357632 HMGB2P26583 209 aaKnown RBP12.8□□□□□ -0.36
CCR9-202ENST00000357632 TUBGCP6Q96RT7 1819 aa12.8□□□□□ -0.36
CCR9-202ENST00000357632 COL5A3P25940 1745 aaPredicted RBP12.8□□□□□ -0.36
CCR9-202ENST00000357632 PDE1AP54750 535 aa12.8□□□□□ -0.36
CCR9-202ENST00000357632 GIGYF2Q6Y7W6 1299 aaKnown RBP12.8□□□□□ -0.36
CCR9-202ENST00000357632 TTLL7Q6ZT98 887 aa12.8□□□□□ -0.36
CCR9-202ENST00000357632 GJD4Q96KN9 370 aaPredicted RBP12.8□□□□□ -0.36
CCR9-202ENST00000357632 BICC1Q9H694 974 aaKnown RBP12.8□□□□□ -0.36
CCR9-202ENST00000357632 MX1P20591 662 aa12.79□□□□□ -0.36
CCR9-202ENST00000357632 G3BP1Q13283 466 aaKnown RBP eCLIP12.79□□□□□ -0.36
CCR9-202ENST00000357632 COPRSQ9NQ92 184 aa12.79□□□□□ -0.36
CCR9-202ENST00000357632 TTC41PQ6P2S7 1318 aa12.79□□□□□ -0.36
CCR9-202ENST00000357632 CASP7P55210 303 aa12.79□□□□□ -0.36
CCR9-202ENST00000357632 CLASRPQ8N2M8 674 aaKnown RBP12.79□□□□□ -0.36
CCR9-202ENST00000357632 KAZALD1Q96I82 304 aa12.79□□□□□ -0.36
CCR9-202ENST00000357632 USP42Q9H9J4 1324 aaKnown RBP12.79□□□□□ -0.36
CCR9-202ENST00000357632 PALLDQ8WX93 1383 aa12.79□□□□□ -0.36
CCR9-202ENST00000357632 NUP98P52948 1817 aa12.79□□□□□ -0.36
CCR9-202ENST00000357632 LOC102724428A0A0B4J2F2 783 aa12.78□□□□□ -0.36
CCR9-202ENST00000357632 SIK1P57059 783 aa12.78□□□□□ -0.36
CCR9-202ENST00000357632 OS9Q13438 667 aaPredicted RBP12.78□□□□□ -0.36
CCR9-202ENST00000357632 GPATCH3Q96I76 525 aa12.78□□□□□ -0.36
CCR9-202ENST00000357632 TBC1D32Q96NH3 1257 aa12.78□□□□□ -0.36
CCR9-202ENST00000357632 SMARCA5O60264 1052 aaPredicted RBP12.78□□□□□ -0.36
CCR9-202ENST00000357632 SLC4A9Q96Q91 983 aa12.78□□□□□ -0.36
CCR9-202ENST00000357632 PLA2G12BQ9BX93 195 aa12.78□□□□□ -0.36
CCR9-202ENST00000357632 CCDC87Q9NVE4 849 aa12.78□□□□□ -0.36
CCR9-202ENST00000357632 FBXO3Q9UK99 471 aa12.78□□□□□ -0.36
CCR9-202ENST00000357632 AFF2P51816 1311 aa12.78□□□□□ -0.36
CCR9-202ENST00000357632 PIP4K2AP48426 406 aaPredicted RBP12.77□□□□□ -0.36
CCR9-202ENST00000357632 CDHR2Q9BYE9 1310 aa12.77□□□□□ -0.36
CCR9-202ENST00000357632 ERC2O15083 957 aa12.77□□□□□ -0.37
CCR9-202ENST00000357632 PCCAP05165 728 aaPredicted RBP12.77□□□□□ -0.37
CCR9-202ENST00000357632 GSPT1P15170 499 aaKnown RBP12.77□□□□□ -0.37
CCR9-202ENST00000357632 ATP6V1AP38606 617 aa12.77□□□□□ -0.37
CCR9-202ENST00000357632 UBE3BQ7Z3V4 1068 aa12.77□□□□□ -0.37
CCR9-202ENST00000357632 C16orf71Q8IYS4 520 aaPredicted RBP12.77□□□□□ -0.37
CCR9-202ENST00000357632 APBB1O00213 710 aa12.76□□□□□ -0.37
CCR9-202ENST00000357632 HSP90B1P14625 803 aaKnown RBP12.76□□□□□ -0.37
CCR9-202ENST00000357632 ZBTB3Q9H5J0 574 aa12.76□□□□□ -0.37
CCR9-202ENST00000357632 ATP5J2-PTCD1G3V325 749 aa12.76□□□□□ -0.37
CCR9-202ENST00000357632 EPB41L2O43491 1005 aaKnown RBP12.76□□□□□ -0.37
CCR9-202ENST00000357632 EIF5P55010 431 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms