RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 THUMPD2Q9BTF0 503 aaKnown RBP12.79□□□□□ -0.36
CAPN3-205ENST00000357568 FUCA2Q9BTY2 467 aa12.79□□□□□ -0.36
CAPN3-205ENST00000357568 CHL1O00533 1208 aa12.79□□□□□ -0.36
CAPN3-205ENST00000357568 CCT4P50991 539 aaKnown RBP12.79□□□□□ -0.36
CAPN3-205ENST00000357568 BBXQ8WY36 941 aaPredicted RBP12.78□□□□□ -0.36
CAPN3-205ENST00000357568 BCL2L12Q9HB09 334 aa12.78□□□□□ -0.36
CAPN3-205ENST00000357568 NRAPQ86VF7 1730 aa12.78□□□□□ -0.36
CAPN3-205ENST00000357568 PEAK1Q9H792 1746 aa12.78□□□□□ -0.36
CAPN3-205ENST00000357568 NUTM2BA6NNL0 878 aaPredicted RBP12.78□□□□□ -0.36
CAPN3-205ENST00000357568 NUTM2EB1AL46 878 aaPredicted RBP12.78□□□□□ -0.36
CAPN3-205ENST00000357568 NUTM2AQ8IVF1 878 aaPredicted RBP12.78□□□□□ -0.36
CAPN3-205ENST00000357568 PDCL2Q8N4E4 241 aa12.78□□□□□ -0.36
CAPN3-205ENST00000357568 FAM208AQ9UK61 1670 aaKnown RBP12.78□□□□□ -0.36
CAPN3-205ENST00000357568 CHMLP26374 656 aa12.77□□□□□ -0.36
CAPN3-205ENST00000357568 PPP4R3BQ5MIZ7 849 aa12.77□□□□□ -0.36
CAPN3-205ENST00000357568 SLIT2O94813 1529 aa12.77□□□□□ -0.36
CAPN3-205ENST00000357568 IP6K1Q92551 441 aa12.77□□□□□ -0.37
CAPN3-205ENST00000357568 PRDM11Q9NQV5 511 aa12.77□□□□□ -0.37
CAPN3-205ENST00000357568 NAP1L2Q9ULW6 460 aaPredicted RBP12.77□□□□□ -0.37
CAPN3-205ENST00000357568 MAP3K19Q56UN5 1328 aa12.77□□□□□ -0.37
CAPN3-205ENST00000357568 FLT4P35916 1363 aa12.77□□□□□ -0.37
CAPN3-205ENST00000357568 SMARCA5O60264 1052 aaPredicted RBP12.76□□□□□ -0.37
CAPN3-205ENST00000357568 GADD45BO75293 160 aaPredicted RBP12.76□□□□□ -0.37
CAPN3-205ENST00000357568 HMOX1P09601 288 aa12.76□□□□□ -0.37
CAPN3-205ENST00000357568 ELL2O00472 640 aaPredicted RBP12.76□□□□□ -0.37
CAPN3-205ENST00000357568 ZSCAN22P10073 491 aaPredicted RBP12.76□□□□□ -0.37
CAPN3-205ENST00000357568 ZC3H6P61129 1189 aaKnown RBP12.76□□□□□ -0.37
CAPN3-205ENST00000357568 MEX3CQ5U5Q3 659 aaKnown RBP12.76□□□□□ -0.37
CAPN3-205ENST00000357568 MEIS3Q99687 375 aa12.76□□□□□ -0.37
CAPN3-205ENST00000357568 HSPA4P34932 840 aa12.75□□□□□ -0.37
CAPN3-205ENST00000357568 RGPD5Q99666 1765 aa12.75□□□□□ -0.37
CAPN3-205ENST00000357568 FAM83GA6ND36 823 aa12.75□□□□□ -0.37
CAPN3-205ENST00000357568 GABPB1Q06547 395 aaPredicted RBP12.75□□□□□ -0.37
CAPN3-205ENST00000357568 FNBP4Q8N3X1 1017 aaPredicted RBP12.75□□□□□ -0.37
CAPN3-205ENST00000357568 CHAMP1Q96JM3 812 aa12.75□□□□□ -0.37
CAPN3-205ENST00000357568 TTC12Q9H892 705 aaPredicted RBP12.75□□□□□ -0.37
CAPN3-205ENST00000357568 PRDM10Q9NQV6 1147 aa12.75□□□□□ -0.37
CAPN3-205ENST00000357568 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.75□□□□□ -0.37
CAPN3-205ENST00000357568 ADAMTS2O95450 1211 aa12.75□□□□□ -0.37
CAPN3-205ENST00000357568 HOXC9P31274 260 aa12.75□□□□□ -0.37
CAPN3-205ENST00000357568 AMPHP49418 695 aa12.75□□□□□ -0.37
CAPN3-205ENST00000357568 CNKSR2Q8WXI2 1034 aa12.75□□□□□ -0.37
CAPN3-205ENST00000357568 LRRCC1Q9C099 1032 aa12.75□□□□□ -0.37
CAPN3-205ENST00000357568 OGFRQ9NZT2 677 aa12.75□□□□□ -0.37
CAPN3-205ENST00000357568 PXDNLA1KZ92 1463 aa12.74□□□□□ -0.37
CAPN3-205ENST00000357568 CAMTA1Q9Y6Y1 1673 aa12.74□□□□□ -0.37
CAPN3-205ENST00000357568 GNAI2P04899 355 aa12.74□□□□□ -0.37
CAPN3-205ENST00000357568 FAM193AP78312 1265 aa12.74□□□□□ -0.37
CAPN3-205ENST00000357568 ATP2B3Q16720 1220 aa12.74□□□□□ -0.37
CAPN3-205ENST00000357568 PALD1Q9ULE6 856 aa12.74□□□□□ -0.37
CAPN3-205ENST00000357568 SOS1Q07889 1333 aaPredicted RBP12.74□□□□□ -0.37
CAPN3-205ENST00000357568 SOX12O15370 315 aa12.74□□□□□ -0.37
CAPN3-205ENST00000357568 HCLS1P14317 486 aaPredicted RBP12.74□□□□□ -0.37
CAPN3-205ENST00000357568 RRS1Q15050 365 aaKnown RBP12.74□□□□□ -0.37
CAPN3-205ENST00000357568 ZHX1Q9UKY1 873 aaPredicted RBP12.74□□□□□ -0.37
CAPN3-205ENST00000357568 CCDC171Q6TFL3 1326 aa12.73□□□□□ -0.37
CAPN3-205ENST00000357568 RGPD1P0DJD0 1748 aa12.73□□□□□ -0.37
CAPN3-205ENST00000357568 COL5A2P05997 1499 aaPredicted RBP12.73□□□□□ -0.37
CAPN3-205ENST00000357568 AEBP1Q8IUX7 1158 aa12.73□□□□□ -0.37
CAPN3-205ENST00000357568 EMILIN1Q9Y6C2 1016 aa12.73□□□□□ -0.37
CAPN3-205ENST00000357568 GNAI3P08754 354 aa12.73□□□□□ -0.37
CAPN3-205ENST00000357568 CBX1P83916 185 aa12.73□□□□□ -0.37
CAPN3-205ENST00000357568 FOXD4L5Q5VV16 416 aaPredicted RBP12.73□□□□□ -0.37
CAPN3-205ENST00000357568 FOXD4L4Q8WXT5 416 aaPredicted RBP12.73□□□□□ -0.37
CAPN3-205ENST00000357568 TTC14Q96N46 770 aa12.73□□□□□ -0.37
CAPN3-205ENST00000357568 ANO2Q9NQ90 1003 aa12.73□□□□□ -0.37
CAPN3-205ENST00000357568 CRB1P82279 1406 aa12.73□□□□□ -0.37
CAPN3-205ENST00000357568 RIOK3O14730 519 aaKnown RBP12.72□□□□□ -0.37
CAPN3-205ENST00000357568 F13A1P00488 732 aa12.72□□□□□ -0.37
CAPN3-205ENST00000357568 GTF2E1P29083 439 aaPredicted RBP12.72□□□□□ -0.37
CAPN3-205ENST00000357568 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.72□□□□□ -0.37
CAPN3-205ENST00000357568 NGLY1Q96IV0 654 aa12.72□□□□□ -0.37
CAPN3-205ENST00000357568 RAD50Q92878 1312 aa12.72□□□□□ -0.37
CAPN3-205ENST00000357568 SMTNL1A8MU46 457 aa12.72□□□□□ -0.37
CAPN3-205ENST00000357568 STX6O43752 255 aa12.72□□□□□ -0.37
CAPN3-205ENST00000357568 CHRNA2Q15822 529 aa12.72□□□□□ -0.37
CAPN3-205ENST00000357568 C8orf37Q96NL8 207 aa12.72□□□□□ -0.37
CAPN3-205ENST00000357568 KCNF1Q9H3M0 494 aa12.72□□□□□ -0.37
CAPN3-205ENST00000357568 CCDC192P0DO97 292 aa12.71□□□□□ -0.37
CAPN3-205ENST00000357568 FBLN1P23142 703 aa12.71□□□□□ -0.37
CAPN3-205ENST00000357568 CREBRFQ8IUR6 639 aa12.71□□□□□ -0.37
CAPN3-205ENST00000357568 CGNQ9P2M7 1197 aaKnown RBP12.71□□□□□ -0.37
CAPN3-205ENST00000357568 BCL9LQ86UU0 1499 aa12.71□□□□□ -0.37
CAPN3-205ENST00000357568 ATP8B2P98198 1209 aa12.71□□□□□ -0.38
CAPN3-205ENST00000357568 PAXIP1Q6ZW49 1069 aaPredicted RBP12.71□□□□□ -0.38
CAPN3-205ENST00000357568 UNC5CLQ8IV45 518 aa12.71□□□□□ -0.38
CAPN3-205ENST00000357568 ZNF830Q96NB3 372 aaPredicted RBP12.71□□□□□ -0.38
CAPN3-205ENST00000357568 LIMCH1Q9UPQ0 1083 aa12.71□□□□□ -0.38
CAPN3-205ENST00000357568 PAXBP1Q9Y5B6 917 aa12.71□□□□□ -0.38
CAPN3-205ENST00000357568 ZBTB7CA1YPR0 619 aa12.7□□□□□ -0.38
CAPN3-205ENST00000357568 FAM200AQ8TCP9 573 aa12.7□□□□□ -0.38
CAPN3-205ENST00000357568 BTG4Q9NY30 223 aa12.7□□□□□ -0.38
CAPN3-205ENST00000357568 CNPY2Q9Y2B0 182 aa12.7□□□□□ -0.38
CAPN3-205ENST00000357568 ELP1O95163 1332 aa12.7□□□□□ -0.38
CAPN3-205ENST00000357568 AFF2P51816 1311 aa12.7□□□□□ -0.38
CAPN3-205ENST00000357568 ZSCAN31Q96LW9 406 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-205ENST00000357568 AXIN2Q9Y2T1 843 aa12.7□□□□□ -0.38
CAPN3-205ENST00000357568 ZNF772Q68DY9 489 aaPredicted RBP12.69□□□□□ -0.38
CAPN3-205ENST00000357568 SH2B1Q9NRF2 756 aaPredicted RBP12.69□□□□□ -0.38
CAPN3-205ENST00000357568 PYCARDQ9ULZ3 195 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms