RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 C9orf78Q9NZ63 289 aaPredicted RBP18.43■□□□□ 0.54
PTBP1-203ENST00000356948 MYL6BP14649 208 aa18.42■□□□□ 0.54
PTBP1-203ENST00000356948 ZC3H6P61129 1189 aaKnown RBP18.42■□□□□ 0.54
PTBP1-203ENST00000356948 KIF1BPQ96EK5 621 aa18.42■□□□□ 0.54
PTBP1-203ENST00000356948 CCDC9Q9Y3X0 531 aaKnown RBP18.42■□□□□ 0.54
PTBP1-203ENST00000356948 ZNF830Q96NB3 372 aaPredicted RBP18.42■□□□□ 0.54
PTBP1-203ENST00000356948 FAM173BQ6P4H8 233 aa18.41■□□□□ 0.54
PTBP1-203ENST00000356948 ZSCAN30Q86W11 494 aa18.41■□□□□ 0.54
PTBP1-203ENST00000356948 CCDC83Q8IWF9 413 aa18.41■□□□□ 0.54
PTBP1-203ENST00000356948 SLIT1O75093 1534 aa18.41■□□□□ 0.54
PTBP1-203ENST00000356948 RAD50Q92878 1312 aa18.41■□□□□ 0.54
PTBP1-203ENST00000356948 SUCLG2Q96I99 432 aa18.41■□□□□ 0.54
PTBP1-203ENST00000356948 GCP02774 474 aa18.41■□□□□ 0.54
PTBP1-203ENST00000356948 TTC14Q96N46 770 aa18.41■□□□□ 0.54
PTBP1-203ENST00000356948 GIGYF1O75420 1035 aaPredicted RBP18.4■□□□□ 0.54
PTBP1-203ENST00000356948 RNMTO43148 476 aaKnown RBP18.4■□□□□ 0.54
PTBP1-203ENST00000356948 FIBPO43427 364 aa18.4■□□□□ 0.54
PTBP1-203ENST00000356948 ST3GAL1Q11201 340 aa18.4■□□□□ 0.54
PTBP1-203ENST00000356948 AACSQ86V21 672 aa18.4■□□□□ 0.54
PTBP1-203ENST00000356948 LTN1O94822 1766 aa18.4■□□□□ 0.54
PTBP1-203ENST00000356948 CHMP3Q9Y3E7 222 aa18.4■□□□□ 0.54
PTBP1-203ENST00000356948 SYT1P21579 422 aa18.39■□□□□ 0.53
PTBP1-203ENST00000356948 EAF2Q96CJ1 260 aaPredicted RBP18.39■□□□□ 0.53
PTBP1-203ENST00000356948 BICC1Q9H694 974 aaKnown RBP18.39■□□□□ 0.53
PTBP1-203ENST00000356948 SASH1O94885 1247 aa18.39■□□□□ 0.53
PTBP1-203ENST00000356948 ANAPC15P60006 121 aa18.39■□□□□ 0.53
PTBP1-203ENST00000356948 JAKMIP1Q96N16 626 aaKnown RBP18.39■□□□□ 0.53
PTBP1-203ENST00000356948 ANKRD24Q8TF21 1146 aa18.39■□□□□ 0.53
PTBP1-203ENST00000356948 BOLA2Q9H3K6 86 aa18.39■□□□□ 0.53
PTBP1-203ENST00000356948 EPHA10Q5JZY3 1008 aa18.38■□□□□ 0.53
PTBP1-203ENST00000356948 CNTROBQ8N137 903 aa18.38■□□□□ 0.53
PTBP1-203ENST00000356948 PTMAP06454 111 aaKnown RBP18.38■□□□□ 0.53
PTBP1-203ENST00000356948 RAB11FIP3O75154 756 aa18.37■□□□□ 0.53
PTBP1-203ENST00000356948 SLFNL1Q499Z3 407 aa18.37■□□□□ 0.53
PTBP1-203ENST00000356948 C17orf53Q8N3J3 647 aaPredicted RBP18.37■□□□□ 0.53
PTBP1-203ENST00000356948 PDLIM2Q96JY6 352 aa18.37■□□□□ 0.53
PTBP1-203ENST00000356948 AKAP4Q5JQC9 854 aa18.37■□□□□ 0.53
PTBP1-203ENST00000356948 FERMT3Q86UX7 667 aa18.37■□□□□ 0.53
PTBP1-203ENST00000356948 DIAPH3Q9NSV4 1193 aa18.37■□□□□ 0.53
PTBP1-203ENST00000356948 INTS4Q96HW7 963 aaKnown RBP18.36■□□□□ 0.53
PTBP1-203ENST00000356948 HYPKQ9NX55 129 aa18.36■□□□□ 0.53
PTBP1-203ENST00000356948 DBF4Q9UBU7 674 aaPredicted RBP18.36■□□□□ 0.53
PTBP1-203ENST00000356948 TRHP20396 242 aaPredicted RBP18.36■□□□□ 0.53
PTBP1-203ENST00000356948 DNM1Q05193 864 aaKnown RBP18.36■□□□□ 0.53
PTBP1-203ENST00000356948 CABLES1Q8TDN4 633 aa18.36■□□□□ 0.53
PTBP1-203ENST00000356948 PPFIA3O75145 1194 aa18.35■□□□□ 0.53
PTBP1-203ENST00000356948 IGKV5-2P06315 115 aa18.35■□□□□ 0.53
PTBP1-203ENST00000356948 MCM2P49736 904 aa18.35■□□□□ 0.53
PTBP1-203ENST00000356948 C1orf141Q5JVX7 400 aa18.35■□□□□ 0.53
PTBP1-203ENST00000356948 CLASRPQ8N2M8 674 aaKnown RBP18.35■□□□□ 0.53
PTBP1-203ENST00000356948 IFIT2P09913 472 aaKnown RBP18.35■□□□□ 0.53
PTBP1-203ENST00000356948 PDIA6Q15084 440 aa18.35■□□□□ 0.53
PTBP1-203ENST00000356948 ME3Q16798 604 aa18.35■□□□□ 0.53
PTBP1-203ENST00000356948 A0A0D9SFI3 127 aa18.34■□□□□ 0.53
PTBP1-203ENST00000356948 PDCL3Q9H2J4 239 aa18.34■□□□□ 0.53
PTBP1-203ENST00000356948 GJB2P29033 226 aa18.34■□□□□ 0.53
PTBP1-203ENST00000356948 NMIQ13287 307 aaPredicted RBP18.34■□□□□ 0.53
PTBP1-203ENST00000356948 STX6O43752 255 aa18.34■□□□□ 0.53
PTBP1-203ENST00000356948 HCLS1P14317 486 aaPredicted RBP18.34■□□□□ 0.53
PTBP1-203ENST00000356948 PLEKHO1Q53GL0 409 aaPredicted RBP18.34■□□□□ 0.53
PTBP1-203ENST00000356948 GIMAP6Q6P9H5 292 aa18.34■□□□□ 0.53
PTBP1-203ENST00000356948 KSR2Q6VAB6 950 aa18.34■□□□□ 0.53
PTBP1-203ENST00000356948 ARHGEF25Q86VW2 580 aa18.34■□□□□ 0.53
PTBP1-203ENST00000356948 NFATC2IPQ8NCF5 419 aa18.34■□□□□ 0.53
PTBP1-203ENST00000356948 ECHDC1Q9NTX5 307 aa18.34■□□□□ 0.53
PTBP1-203ENST00000356948 NFAT5O94916 1531 aa18.33■□□□□ 0.53
PTBP1-203ENST00000356948 ZNF589Q86UQ0 364 aaPredicted RBP18.33■□□□□ 0.53
PTBP1-203ENST00000356948 USP25Q9UHP3 1055 aa18.33■□□□□ 0.53
PTBP1-203ENST00000356948 TPCN1Q9ULQ1 816 aa18.33■□□□□ 0.53
PTBP1-203ENST00000356948 LIMCH1Q9UPQ0 1083 aa18.33■□□□□ 0.53
PTBP1-203ENST00000356948 STK3Q13188 491 aa18.33■□□□□ 0.52
PTBP1-203ENST00000356948 ANKARQ7Z5J8 1434 aa18.33■□□□□ 0.52
PTBP1-203ENST00000356948 VPS37CA5D8V6 355 aaPredicted RBP18.32■□□□□ 0.52
PTBP1-203ENST00000356948 PLCB2Q00722 1185 aa18.32■□□□□ 0.52
PTBP1-203ENST00000356948 ZSCAN22P10073 491 aaPredicted RBP18.32■□□□□ 0.52
PTBP1-203ENST00000356948 TSPY26PQ9H489 355 aa18.32■□□□□ 0.52
PTBP1-203ENST00000356948 GLRX3O76003 335 aaKnown RBP18.32■□□□□ 0.52
PTBP1-203ENST00000356948 PDRG1Q9NUG6 133 aa18.32■□□□□ 0.52
PTBP1-203ENST00000356948 NOL7Q9UMY1 257 aaKnown RBP18.32■□□□□ 0.52
PTBP1-203ENST00000356948 SMC3Q9UQE7 1217 aa18.32■□□□□ 0.52
PTBP1-203ENST00000356948 WDR33Q9C0J8 1336 aaKnown RBP18.32■□□□□ 0.52
PTBP1-203ENST00000356948 PXDNLA1KZ92 1463 aa18.32■□□□□ 0.52
PTBP1-203ENST00000356948 RBM8AQ9Y5S9 174 aaKnown RBP18.31■□□□□ 0.52
PTBP1-203ENST00000356948 AOX1Q06278 1338 aa18.31■□□□□ 0.52
PTBP1-203ENST00000356948 ATP5J2-PTCD1G3V325 749 aa18.31■□□□□ 0.52
PTBP1-203ENST00000356948 PTCD1O75127 700 aaKnown RBP18.31■□□□□ 0.52
PTBP1-203ENST00000356948 BABAM1Q9NWV8 329 aa18.31■□□□□ 0.52
PTBP1-203ENST00000356948 USP16Q9Y5T5 823 aa18.31■□□□□ 0.52
PTBP1-203ENST00000356948 GRM8O00222 908 aa18.31■□□□□ 0.52
PTBP1-203ENST00000356948 CCDC129Q6ZRS4 1044 aa18.31■□□□□ 0.52
PTBP1-203ENST00000356948 SEC62Q99442 399 aaKnown RBP18.31■□□□□ 0.52
PTBP1-203ENST00000356948 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.3■□□□□ 0.52
PTBP1-203ENST00000356948 MBD3O95983 291 aa18.3■□□□□ 0.52
PTBP1-203ENST00000356948 TPM2P07951 284 aa18.3■□□□□ 0.52
PTBP1-203ENST00000356948 KCNJ4P48050 445 aa18.3■□□□□ 0.52
PTBP1-203ENST00000356948 CHRNA2Q15822 529 aa18.3■□□□□ 0.52
PTBP1-203ENST00000356948 FER1L4A9Z1Z3 1794 aa18.3■□□□□ 0.52
PTBP1-203ENST00000356948 AP5Z1O43299 807 aa18.3■□□□□ 0.52
PTBP1-203ENST00000356948 COPS6Q7L5N1 327 aa18.3■□□□□ 0.52
PTBP1-203ENST00000356948 RIC3Q7Z5B4 369 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms