RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 AK2P54819 239 aa16.65■□□□□ 0.26
EBF3-201ENST00000355311 SUCLG2Q96I99 432 aa16.65■□□□□ 0.26
EBF3-201ENST00000355311 OSBPL3Q9H4L5 887 aa16.65■□□□□ 0.26
EBF3-201ENST00000355311 BICC1Q9H694 974 aaKnown RBP16.65■□□□□ 0.26
EBF3-201ENST00000355311 CNPY2Q9Y2B0 182 aa16.65■□□□□ 0.26
EBF3-201ENST00000355311 CCDC173Q0VFZ6 552 aa16.65■□□□□ 0.26
EBF3-201ENST00000355311 PLEKHO1Q53GL0 409 aaPredicted RBP16.65■□□□□ 0.26
EBF3-201ENST00000355311 ANP32BQ92688 251 aaKnown RBP16.65■□□□□ 0.26
EBF3-201ENST00000355311 ZNF830Q96NB3 372 aaPredicted RBP16.65■□□□□ 0.26
EBF3-201ENST00000355311 SNX14Q9Y5W7 946 aa16.65■□□□□ 0.26
EBF3-201ENST00000355311 AKAP12Q02952 1782 aa16.65■□□□□ 0.26
EBF3-201ENST00000355311 FAM177BA6PVY3 158 aa16.64■□□□□ 0.25
EBF3-201ENST00000355311 CYP2E1P05181 493 aaPredicted RBP16.64■□□□□ 0.25
EBF3-201ENST00000355311 JAKMIP1Q96N16 626 aaKnown RBP16.64■□□□□ 0.25
EBF3-201ENST00000355311 USP16Q9Y5T5 823 aa16.64■□□□□ 0.25
EBF3-201ENST00000355311 ADAMTSL3P82987 1691 aa16.64■□□□□ 0.25
EBF3-201ENST00000355311 DIP2AQ14689 1571 aa16.64■□□□□ 0.25
EBF3-201ENST00000355311 KRT28Q7Z3Y7 464 aa16.64■□□□□ 0.25
EBF3-201ENST00000355311 CLASRPQ8N2M8 674 aaKnown RBP16.64■□□□□ 0.25
EBF3-201ENST00000355311 KIF1BPQ96EK5 621 aa16.64■□□□□ 0.25
EBF3-201ENST00000355311 MYD88Q99836 296 aa16.64■□□□□ 0.25
EBF3-201ENST00000355311 KIF24Q5T7B8 1368 aa16.64■□□□□ 0.25
EBF3-201ENST00000355311 ZNF142P52746 1687 aaPredicted RBP16.63■□□□□ 0.25
EBF3-201ENST00000355311 VPS37CA5D8V6 355 aaPredicted RBP16.63■□□□□ 0.25
EBF3-201ENST00000355311 GIGYF1O75420 1035 aaPredicted RBP16.63■□□□□ 0.25
EBF3-201ENST00000355311 EPHA10Q5JZY3 1008 aa16.63■□□□□ 0.25
EBF3-201ENST00000355311 COPS6Q7L5N1 327 aa16.63■□□□□ 0.25
EBF3-201ENST00000355311 USP48Q86UV5 1035 aa16.63■□□□□ 0.25
EBF3-201ENST00000355311 EAF2Q96CJ1 260 aaPredicted RBP16.62■□□□□ 0.25
EBF3-201ENST00000355311 LRRC2Q9BYS8 371 aa16.62■□□□□ 0.25
EBF3-201ENST00000355311 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.62■□□□□ 0.25
EBF3-201ENST00000355311 ADCY9O60503 1353 aa16.62■□□□□ 0.25
EBF3-201ENST00000355311 CNTROBQ8N137 903 aa16.62■□□□□ 0.25
EBF3-201ENST00000355311 XAGE3Q8WTP9 111 aa16.62■□□□□ 0.25
EBF3-201ENST00000355311 DBF4Q9UBU7 674 aaPredicted RBP16.62■□□□□ 0.25
EBF3-201ENST00000355311 KAT6BQ8WYB5 2073 aa16.61■□□□□ 0.25
EBF3-201ENST00000355311 RUFY3Q7L099 469 aa16.61■□□□□ 0.25
EBF3-201ENST00000355311 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.61■□□□□ 0.25
EBF3-201ENST00000355311 CCDC129Q6ZRS4 1044 aa16.61■□□□□ 0.25
EBF3-201ENST00000355311 PPP1R9BQ96SB3 815 aa16.61■□□□□ 0.25
EBF3-201ENST00000355311 CWC22Q9HCG8 908 aaKnown RBP16.61■□□□□ 0.25
EBF3-201ENST00000355311 SGSM2O43147 1006 aa16.6■□□□□ 0.25
EBF3-201ENST00000355311 AKAP4Q5JQC9 854 aa16.6■□□□□ 0.25
EBF3-201ENST00000355311 DNAJC2Q99543 621 aaKnown RBP16.6■□□□□ 0.25
EBF3-201ENST00000355311 BCL11BQ9C0K0 894 aaPredicted RBP16.6■□□□□ 0.25
EBF3-201ENST00000355311 HTATSF1O43719 755 aaKnown RBP16.6■□□□□ 0.25
EBF3-201ENST00000355311 KAZALD1Q96I82 304 aa16.6■□□□□ 0.25
EBF3-201ENST00000355311 SEC62Q99442 399 aaKnown RBP16.6■□□□□ 0.25
EBF3-201ENST00000355311 NAP1L2Q9ULW6 460 aaPredicted RBP16.6■□□□□ 0.25
EBF3-201ENST00000355311 PIK3C2AO00443 1686 aa16.6■□□□□ 0.25
EBF3-201ENST00000355311 SASH1O94885 1247 aa16.59■□□□□ 0.25
EBF3-201ENST00000355311 ZNF496Q96IT1 587 aaPredicted RBP16.59■□□□□ 0.25
EBF3-201ENST00000355311 A0A0G2JS52 829 aa16.59■□□□□ 0.25
EBF3-201ENST00000355311 G3BP1Q13283 466 aaKnown RBP eCLIP16.59■□□□□ 0.25
EBF3-201ENST00000355311 SLIT1O75093 1534 aa16.59■□□□□ 0.25
EBF3-201ENST00000355311 UBE3BQ7Z3V4 1068 aa16.59■□□□□ 0.25
EBF3-201ENST00000355311 LSG1Q9H089 658 aaKnown RBP16.59■□□□□ 0.25
EBF3-201ENST00000355311 PXDNQ92626 1479 aa16.58■□□□□ 0.25
EBF3-201ENST00000355311 HSPA4P34932 840 aa16.58■□□□□ 0.24
EBF3-201ENST00000355311 POLA2Q14181 598 aa16.58■□□□□ 0.24
EBF3-201ENST00000355311 ARHGEF25Q86VW2 580 aa16.58■□□□□ 0.24
EBF3-201ENST00000355311 RAPGEF4Q8WZA2 1011 aa16.58■□□□□ 0.24
EBF3-201ENST00000355311 FSD1Q9BTV5 496 aa16.58■□□□□ 0.24
EBF3-201ENST00000355311 STAP2Q9UGK3 403 aa16.58■□□□□ 0.24
EBF3-201ENST00000355311 ISY1Q9ULR0 285 aaKnown RBP16.58■□□□□ 0.24
EBF3-201ENST00000355311 BRD1O95696 1058 aa16.58■□□□□ 0.24
EBF3-201ENST00000355311 NMIQ13287 307 aaPredicted RBP16.58■□□□□ 0.24
EBF3-201ENST00000355311 C17orf53Q8N3J3 647 aaPredicted RBP16.58■□□□□ 0.24
EBF3-201ENST00000355311 IGKV5-2P06315 115 aa16.57■□□□□ 0.24
EBF3-201ENST00000355311 KSR2Q6VAB6 950 aa16.57■□□□□ 0.24
EBF3-201ENST00000355311 PTMAP06454 111 aaKnown RBP16.57■□□□□ 0.24
EBF3-201ENST00000355311 HSPA2P54652 639 aa16.57■□□□□ 0.24
EBF3-201ENST00000355311 DNM1Q05193 864 aaKnown RBP16.57■□□□□ 0.24
EBF3-201ENST00000355311 DDX11Q96FC9 970 aa16.57■□□□□ 0.24
EBF3-201ENST00000355311 TFIP11Q9UBB9 837 aaKnown RBP16.57■□□□□ 0.24
EBF3-201ENST00000355311 SMC3Q9UQE7 1217 aa16.57■□□□□ 0.24
EBF3-201ENST00000355311 NRKQ7Z2Y5 1582 aa16.57■□□□□ 0.24
EBF3-201ENST00000355311 A0A0D9SFI3 127 aa16.56■□□□□ 0.24
EBF3-201ENST00000355311 KDM4AO75164 1064 aa16.56■□□□□ 0.24
EBF3-201ENST00000355311 SYT1P21579 422 aa16.56■□□□□ 0.24
EBF3-201ENST00000355311 CEBPZQ03701 1054 aaKnown RBP16.56■□□□□ 0.24
EBF3-201ENST00000355311 CAMK4Q16566 473 aa16.56■□□□□ 0.24
EBF3-201ENST00000355311 ARHGAP23Q9P227 1491 aa16.56■□□□□ 0.24
EBF3-201ENST00000355311 TCHHQ07283 1943 aa16.56■□□□□ 0.24
EBF3-201ENST00000355311 GRM8O00222 908 aa16.56■□□□□ 0.24
EBF3-201ENST00000355311 GIMAP6Q6P9H5 292 aa16.56■□□□□ 0.24
EBF3-201ENST00000355311 ZNF589Q86UQ0 364 aaPredicted RBP16.56■□□□□ 0.24
EBF3-201ENST00000355311 NEUROD6Q96NK8 337 aa16.56■□□□□ 0.24
EBF3-201ENST00000355311 GJB2P29033 226 aa16.56■□□□□ 0.24
EBF3-201ENST00000355311 ECHDC1Q9NTX5 307 aa16.56■□□□□ 0.24
EBF3-201ENST00000355311 PDRG1Q9NUG6 133 aa16.55■□□□□ 0.24
EBF3-201ENST00000355311 IGSF3O75054 1194 aa16.55■□□□□ 0.24
EBF3-201ENST00000355311 ZNF790Q6PG37 636 aa16.55■□□□□ 0.24
EBF3-201ENST00000355311 DDX46Q7L014 1031 aaKnown RBP16.55■□□□□ 0.24
EBF3-201ENST00000355311 KCNH5Q8NCM2 988 aa16.55■□□□□ 0.24
EBF3-201ENST00000355311 CHST3Q7LGC8 479 aa16.54■□□□□ 0.24
EBF3-201ENST00000355311 RBM8AQ9Y5S9 174 aaKnown RBP16.54■□□□□ 0.24
EBF3-201ENST00000355311 RAB11FIP3O75154 756 aa16.54■□□□□ 0.24
EBF3-201ENST00000355311 GLRX3O76003 335 aaKnown RBP16.53■□□□□ 0.24
EBF3-201ENST00000355311 HCLS1P14317 486 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms