RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 PRPF40BQ6NWY9 871 aaKnown RBP18.14■□□□□ 0.49
LMNA-201ENST00000347559 TDRD7Q8NHU6 1098 aaKnown RBP18.14■□□□□ 0.49
LMNA-201ENST00000347559 ARHGEF28Q8N1W1 1705 aaKnown RBP18.14■□□□□ 0.49
LMNA-201ENST00000347559 FBXW7Q969H0 707 aa18.14■□□□□ 0.49
LMNA-201ENST00000347559 LSG1Q9H089 658 aaKnown RBP18.14■□□□□ 0.49
LMNA-201ENST00000347559 STAP2Q9UGK3 403 aa18.14■□□□□ 0.49
LMNA-201ENST00000347559 PPLO60437 1756 aa18.13■□□□□ 0.49
LMNA-201ENST00000347559 YTHDC2Q9H6S0 1430 aaKnown RBP18.13■□□□□ 0.49
LMNA-201ENST00000347559 ZCCHC11Q5TAX3 1644 aaKnown RBP18.13■□□□□ 0.49
LMNA-201ENST00000347559 NR1I2O75469 434 aa18.13■□□□□ 0.49
LMNA-201ENST00000347559 BMS1Q14692 1282 aaKnown RBP18.13■□□□□ 0.49
LMNA-201ENST00000347559 CCDC69A6NI79 296 aa18.13■□□□□ 0.49
LMNA-201ENST00000347559 GORABQ5T7V8 394 aa18.13■□□□□ 0.49
LMNA-201ENST00000347559 TULP2O00295 520 aa18.12■□□□□ 0.49
LMNA-201ENST00000347559 TNNT3P45378 269 aaPredicted RBP18.12■□□□□ 0.49
LMNA-201ENST00000347559 ATP8B2P98198 1209 aa18.12■□□□□ 0.49
LMNA-201ENST00000347559 ME3Q16798 604 aa18.12■□□□□ 0.49
LMNA-201ENST00000347559 NEK11Q8NG66 645 aa18.12■□□□□ 0.49
LMNA-201ENST00000347559 A0A087WWV3 80 aa18.12■□□□□ 0.49
LMNA-201ENST00000347559 CYP2C19P33261 490 aa18.12■□□□□ 0.49
LMNA-201ENST00000347559 SURF6O75683 361 aaKnown RBP18.12■□□□□ 0.49
LMNA-201ENST00000347559 ZBTB9Q96C00 473 aa18.12■□□□□ 0.49
LMNA-201ENST00000347559 IL17RAQ96F46 866 aa18.12■□□□□ 0.49
LMNA-201ENST00000347559 TCEANC2Q96MN5 208 aa18.12■□□□□ 0.49
LMNA-201ENST00000347559 LRRN4CLQ8ND94 238 aa18.11■□□□□ 0.49
LMNA-201ENST00000347559 CYP46A1Q9Y6A2 500 aa18.11■□□□□ 0.49
LMNA-201ENST00000347559 ERCC6L2Q5T890 1561 aa18.11■□□□□ 0.49
LMNA-201ENST00000347559 NYAP1Q6ZVC0 841 aa18.11■□□□□ 0.49
LMNA-201ENST00000347559 CLSTN2Q9H4D0 955 aa18.11■□□□□ 0.49
LMNA-201ENST00000347559 DDX19AQ9NUU7 478 aaKnown RBP18.11■□□□□ 0.49
LMNA-201ENST00000347559 BECN2A8MW95 431 aa18.1■□□□□ 0.49
LMNA-201ENST00000347559 HTATSF1O43719 755 aaKnown RBP18.1■□□□□ 0.49
LMNA-201ENST00000347559 GNAI3P08754 354 aa18.1■□□□□ 0.49
LMNA-201ENST00000347559 ST3GAL1Q11201 340 aa18.1■□□□□ 0.49
LMNA-201ENST00000347559 ZFP91Q96JP5 570 aaPredicted RBP18.1■□□□□ 0.49
LMNA-201ENST00000347559 FAM53CQ9NYF3 392 aa18.1■□□□□ 0.49
LMNA-201ENST00000347559 KIF1BPQ96EK5 621 aa18.1■□□□□ 0.49
LMNA-201ENST00000347559 CDC42BPGQ6DT37 1551 aa18.1■□□□□ 0.49
LMNA-201ENST00000347559 CPSF1Q10570 1443 aaKnown RBP18.1■□□□□ 0.49
LMNA-201ENST00000347559 PTH1RQ03431 593 aa18.09■□□□□ 0.49
LMNA-201ENST00000347559 CEBPZQ03701 1054 aaKnown RBP18.09■□□□□ 0.49
LMNA-201ENST00000347559 RAD51AP2Q09MP3 1159 aa18.09■□□□□ 0.49
LMNA-201ENST00000347559 STK31Q9BXU1 1019 aa18.09■□□□□ 0.49
LMNA-201ENST00000347559 TSPYL4Q9UJ04 414 aa18.09■□□□□ 0.49
LMNA-201ENST00000347559 CNTROBQ8N137 903 aa18.09■□□□□ 0.49
LMNA-201ENST00000347559 FEZ2Q9UHY8 353 aaPredicted RBP18.09■□□□□ 0.49
LMNA-201ENST00000347559 ERBB3P21860 1342 aa18.09■□□□□ 0.49
LMNA-201ENST00000347559 CLCN6P51797 869 aa18.09■□□□□ 0.49
LMNA-201ENST00000347559 STK3Q13188 491 aa18.09■□□□□ 0.49
LMNA-201ENST00000347559 CCAR2Q8N163 923 aaKnown RBP18.09■□□□□ 0.49
LMNA-201ENST00000347559 ZSCAN31Q96LW9 406 aaPredicted RBP18.09■□□□□ 0.49
LMNA-201ENST00000347559 SLC20A2Q08357 652 aa18.08■□□□□ 0.49
LMNA-201ENST00000347559 C11orf57Q6ZUT1 292 aaPredicted RBP18.08■□□□□ 0.49
LMNA-201ENST00000347559 SH2B1Q9NRF2 756 aaPredicted RBP18.08■□□□□ 0.49
LMNA-201ENST00000347559 ARHGAP29Q52LW3 1261 aa18.08■□□□□ 0.48
LMNA-201ENST00000347559 LEO1Q8WVC0 666 aaPredicted RBP18.08■□□□□ 0.48
LMNA-201ENST00000347559 SCAND2PQ9GZW5 306 aaPredicted RBP18.08■□□□□ 0.48
LMNA-201ENST00000347559 STAG3Q9UJ98 1225 aa18.08■□□□□ 0.48
LMNA-201ENST00000347559 TPCN1Q9ULQ1 816 aa18.08■□□□□ 0.48
LMNA-201ENST00000347559 NPHP3Q7Z494 1330 aa18.08■□□□□ 0.48
LMNA-201ENST00000347559 SYT10Q6XYQ8 523 aa18.07■□□□□ 0.48
LMNA-201ENST00000347559 WAPLQ7Z5K2 1190 aa18.07■□□□□ 0.48
LMNA-201ENST00000347559 COG3Q96JB2 828 aa18.07■□□□□ 0.48
LMNA-201ENST00000347559 FHOD1Q9Y613 1164 aa18.07■□□□□ 0.48
LMNA-201ENST00000347559 SNW1Q13573 536 aaKnown RBP18.07■□□□□ 0.48
LMNA-201ENST00000347559 IDI1Q13907 227 aa18.07■□□□□ 0.48
LMNA-201ENST00000347559 SLFNL1Q499Z3 407 aa18.07■□□□□ 0.48
LMNA-201ENST00000347559 VPS53Q5VIR6 699 aa18.07■□□□□ 0.48
LMNA-201ENST00000347559 KLHL34Q8N239 644 aa18.07■□□□□ 0.48
LMNA-201ENST00000347559 MAP2P11137 1827 aaKnown RBP18.07■□□□□ 0.48
LMNA-201ENST00000347559 DLG5Q8TDM6 1919 aa18.07■□□□□ 0.48
LMNA-201ENST00000347559 PNMA6AP0CW24 399 aaPredicted RBP18.07■□□□□ 0.48
LMNA-201ENST00000347559 UHRF1BP1LA0JNW5 1464 aa18.06■□□□□ 0.48
LMNA-201ENST00000347559 ANKRD26Q9UPS8 1709 aa18.06■□□□□ 0.48
LMNA-201ENST00000347559 SOX12O15370 315 aa18.06■□□□□ 0.48
LMNA-201ENST00000347559 CCZ1BP86790 482 aa18.06■□□□□ 0.48
LMNA-201ENST00000347559 CCZ1P86791 482 aaPredicted RBP18.06■□□□□ 0.48
LMNA-201ENST00000347559 LARP1Q6PKG0 1096 aaKnown RBP18.06■□□□□ 0.48
LMNA-201ENST00000347559 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.06■□□□□ 0.48
LMNA-201ENST00000347559 NEMFO60524 1076 aa18.06■□□□□ 0.48
LMNA-201ENST00000347559 TEX35Q5T0J7 233 aa18.06■□□□□ 0.48
LMNA-201ENST00000347559 PAXIP1Q6ZW49 1069 aaPredicted RBP18.06■□□□□ 0.48
LMNA-201ENST00000347559 PI4K2BQ8TCG2 481 aa18.06■□□□□ 0.48
LMNA-201ENST00000347559 RAB11FIP3O75154 756 aa18.05■□□□□ 0.48
LMNA-201ENST00000347559 UBTFL1P0CB47 393 aaPredicted RBP18.05■□□□□ 0.48
LMNA-201ENST00000347559 PGBD1Q96JS3 809 aa18.05■□□□□ 0.48
LMNA-201ENST00000347559 ELP1O95163 1332 aa18.05■□□□□ 0.48
LMNA-201ENST00000347559 FOXO3O43524 673 aa18.05■□□□□ 0.48
LMNA-201ENST00000347559 PLA2G4AP47712 749 aa18.05■□□□□ 0.48
LMNA-201ENST00000347559 FLIIQ13045 1269 aa18.05■□□□□ 0.48
LMNA-201ENST00000347559 COL9A3Q14050 684 aaPredicted RBP18.05■□□□□ 0.48
LMNA-201ENST00000347559 EPB41L2O43491 1005 aaKnown RBP18.05■□□□□ 0.48
LMNA-201ENST00000347559 DDX11Q96FC9 970 aa18.05■□□□□ 0.48
LMNA-201ENST00000347559 TSPYL1Q9H0U9 437 aa18.05■□□□□ 0.48
LMNA-201ENST00000347559 TMX1Q9H3N1 280 aa18.05■□□□□ 0.48
LMNA-201ENST00000347559 H2AFXP16104 143 aaPredicted RBP18.04■□□□□ 0.48
LMNA-201ENST00000347559 CDC25BP30305 580 aa18.04■□□□□ 0.48
LMNA-201ENST00000347559 RHPN1Q8TCX5 695 aa18.04■□□□□ 0.48
LMNA-201ENST00000347559 ERCC4Q92889 916 aaPredicted RBP18.04■□□□□ 0.48
LMNA-201ENST00000347559 PDCP20941 246 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms