RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 HYPKQ9NX55 129 aa12.78□□□□□ -0.36
CLCN6-202ENST00000346436 MAP3K12Q12852 859 aa12.78□□□□□ -0.36
CLCN6-202ENST00000346436 OTUD7AQ8TE49 926 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-202ENST00000346436 CAMK4Q16566 473 aa12.77□□□□□ -0.36
CLCN6-202ENST00000346436 PDRG1Q9NUG6 133 aa12.77□□□□□ -0.36
CLCN6-202ENST00000346436 USP21Q9UK80 565 aa12.77□□□□□ -0.36
CLCN6-202ENST00000346436 IDH1O75874 414 aaKnown RBP12.77□□□□□ -0.37
CLCN6-202ENST00000346436 CDKL5O76039 1030 aa12.77□□□□□ -0.37
CLCN6-202ENST00000346436 LARP1BQ659C4 914 aaKnown RBP12.77□□□□□ -0.37
CLCN6-202ENST00000346436 PRPF40BQ6NWY9 871 aaKnown RBP12.77□□□□□ -0.37
CLCN6-202ENST00000346436 DRC1Q96MC2 740 aa12.77□□□□□ -0.37
CLCN6-202ENST00000346436 TNNI2P48788 182 aa12.77□□□□□ -0.37
CLCN6-202ENST00000346436 FLIIQ13045 1269 aa12.77□□□□□ -0.37
CLCN6-202ENST00000346436 ARHGEF6Q15052 776 aa12.77□□□□□ -0.37
CLCN6-202ENST00000346436 CCDC152Q4G0S7 254 aa12.77□□□□□ -0.37
CLCN6-202ENST00000346436 ZNF444Q8N0Y2 327 aaPredicted RBP12.77□□□□□ -0.37
CLCN6-202ENST00000346436 CCAR2Q8N163 923 aaKnown RBP12.76□□□□□ -0.37
CLCN6-202ENST00000346436 ZGPATQ8N5A5 531 aaKnown RBP12.76□□□□□ -0.37
CLCN6-202ENST00000346436 ACSBG1Q96GR2 724 aa12.76□□□□□ -0.37
CLCN6-202ENST00000346436 TPTE2Q6XPS3 522 aa12.76□□□□□ -0.37
CLCN6-202ENST00000346436 FLAD1Q8NFF5 587 aa12.76□□□□□ -0.37
CLCN6-202ENST00000346436 EIF6P56537 245 aaKnown RBP12.76□□□□□ -0.37
CLCN6-202ENST00000346436 HOOK2Q96ED9 719 aa12.76□□□□□ -0.37
CLCN6-202ENST00000346436 RRAGDQ9NQL2 400 aaPredicted RBP12.76□□□□□ -0.37
CLCN6-202ENST00000346436 PDE6BP35913 854 aa12.75□□□□□ -0.37
CLCN6-202ENST00000346436 NEBLO76041 1014 aa12.75□□□□□ -0.37
CLCN6-202ENST00000346436 PPM1FP49593 454 aaPredicted RBP12.75□□□□□ -0.37
CLCN6-202ENST00000346436 ZSCAN23Q3MJ62 389 aa12.75□□□□□ -0.37
CLCN6-202ENST00000346436 CCDC87Q9NVE4 849 aa12.75□□□□□ -0.37
CLCN6-202ENST00000346436 JMYQ8N9B5 988 aa12.75□□□□□ -0.37
CLCN6-202ENST00000346436 ACEP12821 1306 aa12.75□□□□□ -0.37
CLCN6-202ENST00000346436 CCDC96Q2M329 555 aa12.75□□□□□ -0.37
CLCN6-202ENST00000346436 OLFM4Q6UX06 510 aa12.75□□□□□ -0.37
CLCN6-202ENST00000346436 CCDC85AQ96PX6 553 aaPredicted RBP12.75□□□□□ -0.37
CLCN6-202ENST00000346436 ZBTB7BO15156 539 aaPredicted RBP12.75□□□□□ -0.37
CLCN6-202ENST00000346436 TRAPPC3LQ5T215 181 aa12.74□□□□□ -0.37
CLCN6-202ENST00000346436 NUP133Q8WUM0 1156 aa12.74□□□□□ -0.37
CLCN6-202ENST00000346436 DDX11Q96FC9 970 aa12.74□□□□□ -0.37
CLCN6-202ENST00000346436 WASF1Q92558 559 aa12.74□□□□□ -0.37
CLCN6-202ENST00000346436 PLEKHM2Q8IWE5 1019 aa12.74□□□□□ -0.37
CLCN6-202ENST00000346436 SDF4Q9BRK5 362 aa12.74□□□□□ -0.37
CLCN6-202ENST00000346436 CCDC8Q9H0W5 538 aaPredicted RBP12.74□□□□□ -0.37
CLCN6-202ENST00000346436 ZNF521Q96K83 1311 aa12.74□□□□□ -0.37
CLCN6-202ENST00000346436 TMX3Q96JJ7 454 aa12.73□□□□□ -0.37
CLCN6-202ENST00000346436 MYD88Q99836 296 aa12.73□□□□□ -0.37
CLCN6-202ENST00000346436 BOLA2Q9H3K6 86 aa12.73□□□□□ -0.37
CLCN6-202ENST00000346436 PTPRTO14522 1441 aa12.73□□□□□ -0.37
CLCN6-202ENST00000346436 SAMD9LQ8IVG5 1584 aa12.73□□□□□ -0.37
CLCN6-202ENST00000346436 NPC1L1Q9UHC9 1359 aa12.73□□□□□ -0.37
CLCN6-202ENST00000346436 SNRPA1P09661 255 aaKnown RBP12.73□□□□□ -0.37
CLCN6-202ENST00000346436 RXRBP28702 533 aa12.73□□□□□ -0.37
CLCN6-202ENST00000346436 EIF4A2Q14240 407 aaKnown RBP12.73□□□□□ -0.37
CLCN6-202ENST00000346436 ARHGAP45Q92619 1136 aa12.73□□□□□ -0.37
CLCN6-202ENST00000346436 PDCP20941 246 aa12.73□□□□□ -0.37
CLCN6-202ENST00000346436 KLHL40Q2TBA0 621 aa12.73□□□□□ -0.37
CLCN6-202ENST00000346436 DPY19L2Q6NUT2 758 aa12.73□□□□□ -0.37
CLCN6-202ENST00000346436 ZC3H12CQ9C0D7 883 aaKnown RBP12.73□□□□□ -0.37
CLCN6-202ENST00000346436 DBF4Q9UBU7 674 aaPredicted RBP12.73□□□□□ -0.37
CLCN6-202ENST00000346436 USP25Q9UHP3 1055 aa12.73□□□□□ -0.37
CLCN6-202ENST00000346436 DTNBO60941 627 aa12.73□□□□□ -0.37
CLCN6-202ENST00000346436 APBA3O96018 575 aa12.73□□□□□ -0.37
CLCN6-202ENST00000346436 KCNA6P17658 529 aa12.73□□□□□ -0.37
CLCN6-202ENST00000346436 HOMER1Q86YM7 354 aa12.73□□□□□ -0.37
CLCN6-202ENST00000346436 TNMDQ9H2S6 317 aa12.73□□□□□ -0.37
CLCN6-202ENST00000346436 MAGEC2Q9UBF1 373 aaPredicted RBP12.73□□□□□ -0.37
CLCN6-202ENST00000346436 PPIP5K1Q6PFW1 1433 aa12.73□□□□□ -0.37
CLCN6-202ENST00000346436 PPFIA3O75145 1194 aa12.72□□□□□ -0.37
CLCN6-202ENST00000346436 STK11IPQ8N1F8 1099 aa12.72□□□□□ -0.37
CLCN6-202ENST00000346436 ANKRD44Q8N8A2 993 aa12.72□□□□□ -0.37
CLCN6-202ENST00000346436 SNX21Q969T3 373 aa12.72□□□□□ -0.37
CLCN6-202ENST00000346436 UGGT1Q9NYU2 1555 aa12.72□□□□□ -0.37
CLCN6-202ENST00000346436 RIMS2Q9UQ26 1411 aa12.72□□□□□ -0.37
CLCN6-202ENST00000346436 RAB3GAP1Q15042 981 aa12.72□□□□□ -0.37
CLCN6-202ENST00000346436 ANKRD1Q15327 319 aa12.72□□□□□ -0.37
CLCN6-202ENST00000346436 TRMT2AQ8IZ69 625 aaKnown RBP12.72□□□□□ -0.37
CLCN6-202ENST00000346436 SUPT20HQ8NEM7 779 aa12.72□□□□□ -0.37
CLCN6-202ENST00000346436 PTPRCP08575 1304 aa12.72□□□□□ -0.37
CLCN6-202ENST00000346436 PDE1AP54750 535 aa12.72□□□□□ -0.37
CLCN6-202ENST00000346436 STIM1Q13586 685 aa12.72□□□□□ -0.37
CLCN6-202ENST00000346436 ANKRD18AQ8IVF6 992 aa12.72□□□□□ -0.37
CLCN6-202ENST00000346436 KIF1BPQ96EK5 621 aa12.72□□□□□ -0.37
CLCN6-202ENST00000346436 PLA2R1Q13018 1463 aa12.72□□□□□ -0.37
CLCN6-202ENST00000346436 LETM1O95202 739 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-202ENST00000346436 BLOC1S2Q6QNY1 142 aa12.72□□□□□ -0.37
CLCN6-202ENST00000346436 ZNF771Q7L3S4 317 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-202ENST00000346436 LRRIQ1Q96JM4 1722 aa12.72□□□□□ -0.37
CLCN6-202ENST00000346436 ZHX3Q9H4I2 956 aa12.72□□□□□ -0.37
CLCN6-202ENST00000346436 TRPC5Q9UL62 973 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-202ENST00000346436 CCDC192P0DO97 292 aa12.71□□□□□ -0.37
CLCN6-202ENST00000346436 GPTP24298 496 aa12.71□□□□□ -0.37
CLCN6-202ENST00000346436 ATP2B1P20020 1258 aa12.71□□□□□ -0.37
CLCN6-202ENST00000346436 KRT85P78386 507 aa12.71□□□□□ -0.37
CLCN6-202ENST00000346436 TCIRG1Q13488 830 aa12.71□□□□□ -0.37
CLCN6-202ENST00000346436 CEP85Q6P2H3 762 aa12.71□□□□□ -0.37
CLCN6-202ENST00000346436 ZNF804AQ7Z570 1209 aa12.71□□□□□ -0.37
CLCN6-202ENST00000346436 JARID2Q92833 1246 aaPredicted RBP12.71□□□□□ -0.37
CLCN6-202ENST00000346436 RNF41Q9H4P4 317 aaPredicted RBP12.71□□□□□ -0.37
CLCN6-202ENST00000346436 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.71□□□□□ -0.37
CLCN6-202ENST00000346436 RFX1P22670 979 aa12.71□□□□□ -0.37
CLCN6-202ENST00000346436 NAP1L1P55209 391 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms