RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 NGLY1Q96IV0 654 aa31.22■■■□□ 2.59
TRADD-201ENST00000345057 PIP4K2AP48426 406 aaPredicted RBP31.21■■■□□ 2.59
TRADD-201ENST00000345057 SMARCA5O60264 1052 aaPredicted RBP31.2■■■□□ 2.58
TRADD-201ENST00000345057 VPS72Q15906 364 aa31.2■■■□□ 2.58
TRADD-201ENST00000345057 TTC22Q5TAA0 569 aa31.2■■■□□ 2.58
TRADD-201ENST00000345057 OSBPL3Q9H4L5 887 aa31.2■■■□□ 2.58
TRADD-201ENST00000345057 DOT1LQ8TEK3 1739 aa31.19■■■□□ 2.58
TRADD-201ENST00000345057 SEC24BO95487 1268 aa31.19■■■□□ 2.58
TRADD-201ENST00000345057 A1BGP04217 495 aa31.19■■■□□ 2.58
TRADD-201ENST00000345057 SURF6O75683 361 aaKnown RBP31.18■■■□□ 2.58
TRADD-201ENST00000345057 C8orf37Q96NL8 207 aa31.18■■■□□ 2.58
TRADD-201ENST00000345057 FNBP4Q8N3X1 1017 aaPredicted RBP31.18■■■□□ 2.58
TRADD-201ENST00000345057 SYTL4Q96C24 671 aaPredicted RBP31.18■■■□□ 2.58
TRADD-201ENST00000345057 MSH5O43196 834 aa31.17■■■□□ 2.58
TRADD-201ENST00000345057 C16orf71Q8IYS4 520 aaPredicted RBP31.17■■■□□ 2.58
TRADD-201ENST00000345057 RBM42Q9BTD8 480 aaKnown RBP31.17■■■□□ 2.58
TRADD-201ENST00000345057 COL15A1P39059 1388 aa31.17■■■□□ 2.58
TRADD-201ENST00000345057 KIF1BPQ96EK5 621 aa31.16■■■□□ 2.58
TRADD-201ENST00000345057 NOP58Q9Y2X3 529 aaKnown RBP31.16■■■□□ 2.58
TRADD-201ENST00000345057 BCL9LQ86UU0 1499 aa31.15■■■□□ 2.58
TRADD-201ENST00000345057 PRIM1P49642 420 aaKnown RBP31.15■■■□□ 2.58
TRADD-201ENST00000345057 AFDNP55196 1824 aaKnown RBP31.15■■■□□ 2.58
TRADD-201ENST00000345057 CDC45O75419 566 aa31.14■■■□□ 2.58
TRADD-201ENST00000345057 ERICH6Q7L0X2 663 aa31.14■■■□□ 2.58
TRADD-201ENST00000345057 SUCLG2Q96I99 432 aa31.14■■■□□ 2.58
TRADD-201ENST00000345057 ERC1Q8IUD2 1116 aa31.14■■■□□ 2.58
TRADD-201ENST00000345057 DNAJC10Q8IXB1 793 aa31.14■■■□□ 2.58
TRADD-201ENST00000345057 NUP188Q5SRE5 1749 aa31.14■■■□□ 2.58
TRADD-201ENST00000345057 TBC1D32Q96NH3 1257 aa31.13■■■□□ 2.57
TRADD-201ENST00000345057 GSPT1P15170 499 aaKnown RBP31.12■■■□□ 2.57
TRADD-201ENST00000345057 PDE1AP54750 535 aa31.12■■■□□ 2.57
TRADD-201ENST00000345057 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.12■■■□□ 2.57
TRADD-201ENST00000345057 MARCH10Q8NA82 808 aaPredicted RBP31.12■■■□□ 2.57
TRADD-201ENST00000345057 AOX1Q06278 1338 aa31.11■■■□□ 2.57
TRADD-201ENST00000345057 TTLL7Q6ZT98 887 aa31.11■■■□□ 2.57
TRADD-201ENST00000345057 OTUD7AQ8TE49 926 aaPredicted RBP31.11■■■□□ 2.57
TRADD-201ENST00000345057 BICC1Q9H694 974 aaKnown RBP31.11■■■□□ 2.57
TRADD-201ENST00000345057 RHPN1Q8TCX5 695 aa31.1■■■□□ 2.57
TRADD-201ENST00000345057 BCL11AQ9H165 835 aa31.1■■■□□ 2.57
TRADD-201ENST00000345057 SALL3Q9BXA9 1300 aa31.1■■■□□ 2.57
TRADD-201ENST00000345057 MX1P20591 662 aa31.1■■■□□ 2.57
TRADD-201ENST00000345057 KIF6Q6ZMV9 814 aa31.1■■■□□ 2.57
TRADD-201ENST00000345057 MFAP1P55081 439 aaKnown RBP31.09■■■□□ 2.57
TRADD-201ENST00000345057 OS9Q13438 667 aaPredicted RBP31.09■■■□□ 2.57
TRADD-201ENST00000345057 CASC1Q6TDU7 716 aa31.09■■■□□ 2.57
TRADD-201ENST00000345057 CCDC191Q8NCU4 936 aa31.09■■■□□ 2.57
TRADD-201ENST00000345057 KAZALD1Q96I82 304 aa31.09■■■□□ 2.57
TRADD-201ENST00000345057 CWC25Q9NXE8 425 aaPredicted RBP31.09■■■□□ 2.57
TRADD-201ENST00000345057 STAP2Q9UGK3 403 aa31.09■■■□□ 2.57
TRADD-201ENST00000345057 A0A087WZG4 1122 aa31.08■■■□□ 2.57
TRADD-201ENST00000345057 TBC1D9Q6ZT07 1266 aa31.07■■■□□ 2.56
TRADD-201ENST00000345057 DAXXQ9UER7 740 aaPredicted RBP31.07■■■□□ 2.56
TRADD-201ENST00000345057 USP21Q9UK80 565 aa31.07■■■□□ 2.56
TRADD-201ENST00000345057 KAT6BQ8WYB5 2073 aa31.07■■■□□ 2.56
TRADD-201ENST00000345057 ATP5J2-PTCD1G3V325 749 aa31.06■■■□□ 2.56
TRADD-201ENST00000345057 CYP19A1P11511 503 aaPredicted RBP31.06■■■□□ 2.56
TRADD-201ENST00000345057 FAM98CQ17RN3 349 aaKnown RBP31.06■■■□□ 2.56
TRADD-201ENST00000345057 C22orf23Q9BZE7 217 aa31.06■■■□□ 2.56
TRADD-201ENST00000345057 ZBTB3Q9H5J0 574 aa31.05■■■□□ 2.56
TRADD-201ENST00000345057 UBE3BQ7Z3V4 1068 aa31.04■■■□□ 2.56
TRADD-201ENST00000345057 SMARCC1Q92922 1105 aaPredicted RBP31.04■■■□□ 2.56
TRADD-201ENST00000345057 H7C1W4 665 aa31.03■■■□□ 2.56
TRADD-201ENST00000345057 SDSP20132 328 aa31.03■■■□□ 2.56
TRADD-201ENST00000345057 RABL6Q3YEC7 729 aaPredicted RBP31.03■■■□□ 2.56
TRADD-201ENST00000345057 TJP1Q07157 1748 aa31.03■■■□□ 2.56
TRADD-201ENST00000345057 G3BP1Q13283 466 aaKnown RBP eCLIP31.02■■■□□ 2.56
TRADD-201ENST00000345057 MEX3CQ5U5Q3 659 aaKnown RBP31.02■■■□□ 2.56
TRADD-201ENST00000345057 CLASRPQ8N2M8 674 aaKnown RBP31.02■■■□□ 2.56
TRADD-201ENST00000345057 SLC4A9Q96Q91 983 aa31.02■■■□□ 2.56
TRADD-201ENST00000345057 IL1RAPL2Q9NP60 686 aa31.02■■■□□ 2.56
TRADD-201ENST00000345057 TRIM28Q13263 835 aaKnown RBP31.01■■■□□ 2.56
TRADD-201ENST00000345057 TCIRG1Q13488 830 aa31.01■■■□□ 2.56
TRADD-201ENST00000345057 HSP90AB3PQ58FF7 597 aa31.01■■■□□ 2.56
TRADD-201ENST00000345057 CICQ96RK0 1608 aaPredicted RBP31.01■■■□□ 2.56
TRADD-201ENST00000345057 CASP7P55210 303 aa31.01■■■□□ 2.55
TRADD-201ENST00000345057 ACSBG1Q96GR2 724 aa31.01■■■□□ 2.55
TRADD-201ENST00000345057 IL6STP40189 918 aaPredicted RBP31■■■□□ 2.55
TRADD-201ENST00000345057 ISCA1Q9BUE6 129 aa31■■■□□ 2.55
TRADD-201ENST00000345057 ZNF330Q9Y3S2 320 aaPredicted RBP31■■■□□ 2.55
TRADD-201ENST00000345057 MAP3K15Q6ZN16 1313 aa31■■■□□ 2.55
TRADD-201ENST00000345057 A0A0G2JS52 829 aa30.99■■■□□ 2.55
TRADD-201ENST00000345057 BECN1Q14457 450 aa30.99■■■□□ 2.55
TRADD-201ENST00000345057 COPRSQ9NQ92 184 aa30.97■■■□□ 2.55
TRADD-201ENST00000345057 TTC41PQ6P2S7 1318 aa30.97■■■□□ 2.55
TRADD-201ENST00000345057 RBM25P49756 843 aaKnown RBP30.97■■■□□ 2.55
TRADD-201ENST00000345057 GPATCH3Q96I76 525 aa30.97■■■□□ 2.55
TRADD-201ENST00000345057 USP42Q9H9J4 1324 aaKnown RBP30.96■■■□□ 2.55
TRADD-201ENST00000345057 EPHA10Q5JZY3 1008 aa30.96■■■□□ 2.55
TRADD-201ENST00000345057 GIGYF2Q6Y7W6 1299 aaKnown RBP30.96■■■□□ 2.55
TRADD-201ENST00000345057 PA2G4Q9UQ80 394 aaKnown RBP30.96■■■□□ 2.55
TRADD-201ENST00000345057 LOC102724428A0A0B4J2F2 783 aa30.95■■■□□ 2.55
TRADD-201ENST00000345057 SIK1P57059 783 aa30.95■■■□□ 2.55
TRADD-201ENST00000345057 ZBTB1Q9Y2K1 713 aa30.95■■■□□ 2.55
TRADD-201ENST00000345057 PALLDQ8WX93 1383 aa30.95■■■□□ 2.55
TRADD-201ENST00000345057 THSD7AQ9UPZ6 1657 aa30.95■■■□□ 2.54
TRADD-201ENST00000345057 ATP6V1AP38606 617 aa30.95■■■□□ 2.54
TRADD-201ENST00000345057 ERVV-1B6SEH8 477 aa30.94■■■□□ 2.54
TRADD-201ENST00000345057 MYT1Q01538 1121 aa30.94■■■□□ 2.54
TRADD-201ENST00000345057 NUTM1Q86Y26 1132 aa30.93■■■□□ 2.54
TRADD-201ENST00000345057 ZNF831Q5JPB2 1677 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms