RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 BICC1Q9H694 974 aaKnown RBP25.97■■□□□ 1.75
CCDC38-201ENST00000344280 SLC52A2Q9HAB3 445 aa25.97■■□□□ 1.75
CCDC38-201ENST00000344280 TTC41PQ6P2S7 1318 aa25.97■■□□□ 1.75
CCDC38-201ENST00000344280 IGKV5-2P06315 115 aa25.97■■□□□ 1.75
CCDC38-201ENST00000344280 MYL6BP14649 208 aa25.97■■□□□ 1.75
CCDC38-201ENST00000344280 RASEFQ8IZ41 740 aa25.97■■□□□ 1.75
CCDC38-201ENST00000344280 GPT2Q8TD30 523 aa25.97■■□□□ 1.75
CCDC38-201ENST00000344280 MST1RQ04912 1400 aa25.96■■□□□ 1.75
CCDC38-201ENST00000344280 GLRX3O76003 335 aaKnown RBP25.96■■□□□ 1.75
CCDC38-201ENST00000344280 SNX14Q9Y5W7 946 aa25.96■■□□□ 1.75
CCDC38-201ENST00000344280 PHKG2P15735 406 aa25.95■■□□□ 1.75
CCDC38-201ENST00000344280 MEGF6O75095 1541 aa25.95■■□□□ 1.75
CCDC38-201ENST00000344280 EPB41L2O43491 1005 aaKnown RBP25.95■■□□□ 1.74
CCDC38-201ENST00000344280 CRYBG1Q9Y4K1 1723 aa25.95■■□□□ 1.74
CCDC38-201ENST00000344280 BRD1O95696 1058 aa25.94■■□□□ 1.74
CCDC38-201ENST00000344280 CHRNA2Q15822 529 aa25.94■■□□□ 1.74
CCDC38-201ENST00000344280 INTS4Q96HW7 963 aaKnown RBP25.94■■□□□ 1.74
CCDC38-201ENST00000344280 UTYO14607 1347 aa25.93■■□□□ 1.74
CCDC38-201ENST00000344280 C5P01031 1676 aa25.93■■□□□ 1.74
CCDC38-201ENST00000344280 TMEM94Q12767 1356 aa25.93■■□□□ 1.74
CCDC38-201ENST00000344280 SASH1O94885 1247 aa25.93■■□□□ 1.74
CCDC38-201ENST00000344280 DDX58O95786 925 aaKnown RBP25.93■■□□□ 1.74
CCDC38-201ENST00000344280 PIP4K2AP48426 406 aaPredicted RBP25.93■■□□□ 1.74
CCDC38-201ENST00000344280 ECHDC1Q9NTX5 307 aa25.93■■□□□ 1.74
CCDC38-201ENST00000344280 RBM27Q9P2N5 1060 aaKnown RBP25.93■■□□□ 1.74
CCDC38-201ENST00000344280 LMTK3Q96Q04 1460 aa25.93■■□□□ 1.74
CCDC38-201ENST00000344280 ATF3P18847 181 aa25.93■■□□□ 1.74
CCDC38-201ENST00000344280 ZSCAN23Q3MJ62 389 aa25.93■■□□□ 1.74
CCDC38-201ENST00000344280 RIC3Q7Z5B4 369 aa25.93■■□□□ 1.74
CCDC38-201ENST00000344280 AACSQ86V21 672 aa25.93■■□□□ 1.74
CCDC38-201ENST00000344280 ZNF496Q96IT1 587 aaPredicted RBP25.93■■□□□ 1.74
CCDC38-201ENST00000344280 NSFL1CQ9UNZ2 370 aaKnown RBP25.93■■□□□ 1.74
CCDC38-201ENST00000344280 IFIT2P09913 472 aaKnown RBP25.92■■□□□ 1.74
CCDC38-201ENST00000344280 TATP17735 454 aaPredicted RBP25.92■■□□□ 1.74
CCDC38-201ENST00000344280 LARP6Q9BRS8 491 aaKnown RBP25.92■■□□□ 1.74
CCDC38-201ENST00000344280 DNAJC5Q9H3Z4 198 aa25.92■■□□□ 1.74
CCDC38-201ENST00000344280 KLHDC4Q8TBB5 520 aa25.91■■□□□ 1.74
CCDC38-201ENST00000344280 XAGE3Q8WTP9 111 aa25.91■■□□□ 1.74
CCDC38-201ENST00000344280 SCN11AQ9UI33 1791 aa25.91■■□□□ 1.74
CCDC38-201ENST00000344280 ANO8Q9HCE9 1232 aaPredicted RBP25.91■■□□□ 1.74
CCDC38-201ENST00000344280 CSB-PGBD3P0DP91 1061 aa25.9■■□□□ 1.74
CCDC38-201ENST00000344280 EAF2Q96CJ1 260 aaPredicted RBP25.9■■□□□ 1.74
CCDC38-201ENST00000344280 SIL1Q9H173 461 aa25.9■■□□□ 1.74
CCDC38-201ENST00000344280 PTH1RQ03431 593 aa25.9■■□□□ 1.74
CCDC38-201ENST00000344280 COPS6Q7L5N1 327 aa25.9■■□□□ 1.74
CCDC38-201ENST00000344280 ERC1Q8IUD2 1116 aa25.9■■□□□ 1.74
CCDC38-201ENST00000344280 TTC14Q96N46 770 aa25.9■■□□□ 1.74
CCDC38-201ENST00000344280 DIAPH3Q9NSV4 1193 aa25.9■■□□□ 1.74
CCDC38-201ENST00000344280 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.9■■□□□ 1.74
CCDC38-201ENST00000344280 USP16Q9Y5T5 823 aa25.9■■□□□ 1.74
CCDC38-201ENST00000344280 CPA1P15085 419 aa25.89■■□□□ 1.74
CCDC38-201ENST00000344280 ZNF445P59923 1031 aa25.89■■□□□ 1.74
CCDC38-201ENST00000344280 CCDC8Q9H0W5 538 aaPredicted RBP25.89■■□□□ 1.74
CCDC38-201ENST00000344280 TLR7Q9NYK1 1049 aaKnown RBP25.89■■□□□ 1.74
CCDC38-201ENST00000344280 NEURL1BA8MQ27 555 aa25.89■■□□□ 1.73
CCDC38-201ENST00000344280 CYP27B1O15528 508 aa25.89■■□□□ 1.73
CCDC38-201ENST00000344280 EPHA10Q5JZY3 1008 aa25.89■■□□□ 1.73
CCDC38-201ENST00000344280 KIAA1211Q6ZU35 1233 aa25.89■■□□□ 1.73
CCDC38-201ENST00000344280 JARID2Q92833 1246 aaPredicted RBP25.88■■□□□ 1.73
CCDC38-201ENST00000344280 COL18A1P39060 1754 aa25.88■■□□□ 1.73
CCDC38-201ENST00000344280 FOXD4L6Q3SYB3 417 aaPredicted RBP25.88■■□□□ 1.73
CCDC38-201ENST00000344280 FOXD4L3Q6VB84 417 aaPredicted RBP25.88■■□□□ 1.73
CCDC38-201ENST00000344280 HDAC5Q9UQL6 1122 aa25.88■■□□□ 1.73
CCDC38-201ENST00000344280 NASPP49321 788 aaPredicted RBP25.87■■□□□ 1.73
CCDC38-201ENST00000344280 AK2P54819 239 aa25.87■■□□□ 1.73
CCDC38-201ENST00000344280 LARP1Q6PKG0 1096 aaKnown RBP25.87■■□□□ 1.73
CCDC38-201ENST00000344280 LRP10Q7Z4F1 713 aa25.87■■□□□ 1.73
CCDC38-201ENST00000344280 IFNL2Q8IZJ0 200 aa25.87■■□□□ 1.73
CCDC38-201ENST00000344280 MYD88Q99836 296 aa25.87■■□□□ 1.73
CCDC38-201ENST00000344280 STRCP1A6NGW2 1772 aa25.87■■□□□ 1.73
CCDC38-201ENST00000344280 G3BP1Q13283 466 aaKnown RBP eCLIP25.86■■□□□ 1.73
CCDC38-201ENST00000344280 GCKRQ14397 625 aa25.86■■□□□ 1.73
CCDC38-201ENST00000344280 RUFY3Q7L099 469 aa25.86■■□□□ 1.73
CCDC38-201ENST00000344280 TMEM63CQ9P1W3 806 aa25.86■■□□□ 1.73
CCDC38-201ENST00000344280 ERBB4Q15303 1308 aa25.85■■□□□ 1.73
CCDC38-201ENST00000344280 GPATCH3Q96I76 525 aa25.85■■□□□ 1.73
CCDC38-201ENST00000344280 ADCK5Q3MIX3 580 aa25.85■■□□□ 1.73
CCDC38-201ENST00000344280 METTL22Q9BUU2 404 aaPredicted RBP25.84■■□□□ 1.73
CCDC38-201ENST00000344280 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.84■■□□□ 1.73
CCDC38-201ENST00000344280 CASTP20810 708 aaKnown RBP25.84■■□□□ 1.73
CCDC38-201ENST00000344280 NEXNQ0ZGT2 675 aa25.84■■□□□ 1.73
CCDC38-201ENST00000344280 EVI5LQ96CN4 794 aa25.84■■□□□ 1.73
CCDC38-201ENST00000344280 FAM227BQ96M60 508 aa25.84■■□□□ 1.73
CCDC38-201ENST00000344280 PRIM1P49642 420 aaKnown RBP25.83■■□□□ 1.73
CCDC38-201ENST00000344280 PRPF40BQ6NWY9 871 aaKnown RBP25.83■■□□□ 1.73
CCDC38-201ENST00000344280 RUFY2Q8WXA3 655 aa25.83■■□□□ 1.72
CCDC38-201ENST00000344280 RPAP1Q9BWH6 1393 aaPredicted RBP25.82■■□□□ 1.72
CCDC38-201ENST00000344280 DTNBO60941 627 aa25.82■■□□□ 1.72
CCDC38-201ENST00000344280 ANKRD13DQ6ZTN6 518 aa25.82■■□□□ 1.72
CCDC38-201ENST00000344280 DCAF5Q96JK2 942 aa25.82■■□□□ 1.72
CCDC38-201ENST00000344280 GDPD2Q9HCC8 539 aa25.82■■□□□ 1.72
CCDC38-201ENST00000344280 SNRPA1P09661 255 aaKnown RBP25.81■■□□□ 1.72
CCDC38-201ENST00000344280 TTC5Q8N0Z6 440 aa25.81■■□□□ 1.72
CCDC38-201ENST00000344280 DDX54Q8TDD1 881 aaKnown RBP25.81■■□□□ 1.72
CCDC38-201ENST00000344280 RBSNQ9H1K0 784 aa25.81■■□□□ 1.72
CCDC38-201ENST00000344280 BOLA2Q9H3K6 86 aa25.81■■□□□ 1.72
CCDC38-201ENST00000344280 LARGE1O95461 756 aa25.81■■□□□ 1.72
CCDC38-201ENST00000344280 TNS3Q68CZ2 1445 aa25.8■■□□□ 1.72
CCDC38-201ENST00000344280 NMIQ13287 307 aaPredicted RBP25.8■■□□□ 1.72
CCDC38-201ENST00000344280 LIMCH1Q9UPQ0 1083 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms