RNA–Protein interactions for RNA: ENST00000344085.9

ZNF880-201, Transcript of zinc finger protein 880, humanhuman

TSL 1 (best) BASIC

Gene ZNF880, Length 496 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF880-201ENST00000344085 L3MBTL3Q96JM7 780 aaPredicted RBP12.61□□□□□ -0.39
ZNF880-201ENST00000344085 CLEC11AQ9Y240 323 aa12.61□□□□□ -0.39
ZNF880-201ENST00000344085 DIAPH1O60610 1272 aaKnown RBP12.6□□□□□ -0.39
ZNF880-201ENST00000344085 ZNF790Q6PG37 636 aa12.6□□□□□ -0.39
ZNF880-201ENST00000344085 CAMTA2O94983 1202 aa12.59□□□□□ -0.39
ZNF880-201ENST00000344085 LBX1P52954 281 aa12.59□□□□□ -0.39
ZNF880-201ENST00000344085 DZIP3Q86Y13 1208 aaKnown RBP12.59□□□□□ -0.39
ZNF880-201ENST00000344085 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
ZNF880-201ENST00000344085 HACL1Q9UJ83 578 aa12.59□□□□□ -0.39
ZNF880-201ENST00000344085 SCN4AP35499 1836 aa12.59□□□□□ -0.39
ZNF880-201ENST00000344085 SLX4Q8IY92 1834 aa12.59□□□□□ -0.39
ZNF880-201ENST00000344085 CACNA1SQ13698 1873 aa12.59□□□□□ -0.39
ZNF880-201ENST00000344085 ARFGEF2Q9Y6D5 1785 aa12.58□□□□□ -0.39
ZNF880-201ENST00000344085 GNAT3A8MTJ3 354 aa12.58□□□□□ -0.4
ZNF880-201ENST00000344085 A1BGP04217 495 aa12.58□□□□□ -0.4
ZNF880-201ENST00000344085 FKBP4Q02790 459 aaKnown RBP eCLIP12.58□□□□□ -0.4
ZNF880-201ENST00000344085 NBPF5PQ86XG9 351 aaPredicted RBP12.58□□□□□ -0.4
ZNF880-201ENST00000344085 GAS2L2Q8NHY3 880 aa12.58□□□□□ -0.4
ZNF880-201ENST00000344085 WBP1LQ9NX94 342 aa12.58□□□□□ -0.4
ZNF880-201ENST00000344085 ZNF652Q9Y2D9 606 aa12.58□□□□□ -0.4
ZNF880-201ENST00000344085 ITGBL1O95965 494 aaPredicted RBP12.57□□□□□ -0.4
ZNF880-201ENST00000344085 NPR1P16066 1061 aa12.57□□□□□ -0.4
ZNF880-201ENST00000344085 EPHX2P34913 555 aa12.57□□□□□ -0.4
ZNF880-201ENST00000344085 AMER1Q5JTC6 1135 aaPredicted RBP12.57□□□□□ -0.4
ZNF880-201ENST00000344085 PNMA8AQ86V59 439 aaPredicted RBP12.57□□□□□ -0.4
ZNF880-201ENST00000344085 ZNF277Q9NRM2 450 aaPredicted RBP12.57□□□□□ -0.4
ZNF880-201ENST00000344085 ZNF541Q9H0D2 1346 aa12.57□□□□□ -0.4
ZNF880-201ENST00000344085 RASSF10A6NK89 507 aa12.56□□□□□ -0.4
ZNF880-201ENST00000344085 MAP2K1Q02750 393 aaPredicted RBP12.56□□□□□ -0.4
ZNF880-201ENST00000344085 DEFB115Q30KQ5 88 aa12.56□□□□□ -0.4
ZNF880-201ENST00000344085 RTKN2Q8IZC4 609 aa12.56□□□□□ -0.4
ZNF880-201ENST00000344085 ABHD8Q96I13 439 aa12.56□□□□□ -0.4
ZNF880-201ENST00000344085 ABT1Q9ULW3 272 aaKnown RBP12.56□□□□□ -0.4
ZNF880-201ENST00000344085 CLSPNQ9HAW4 1339 aa12.56□□□□□ -0.4
ZNF880-201ENST00000344085 BCORQ6W2J9 1755 aa12.56□□□□□ -0.4
ZNF880-201ENST00000344085 U2SURPO15042 1029 aaKnown RBP12.55□□□□□ -0.4
ZNF880-201ENST00000344085 SLC34A2O95436 690 aa12.55□□□□□ -0.4
ZNF880-201ENST00000344085 HSPA8P11142 646 aaKnown RBP12.55□□□□□ -0.4
ZNF880-201ENST00000344085 TRIM26Q12899 539 aaPredicted RBP12.55□□□□□ -0.4
ZNF880-201ENST00000344085 FAM161AQ3B820 660 aa12.55□□□□□ -0.4
ZNF880-201ENST00000344085 CNTROBQ8N137 903 aa12.55□□□□□ -0.4
ZNF880-201ENST00000344085 IL17REQ8NFR9 667 aa12.55□□□□□ -0.4
ZNF880-201ENST00000344085 RNF123Q5XPI4 1314 aa12.55□□□□□ -0.4
ZNF880-201ENST00000344085 IARSP41252 1262 aaKnown RBP12.54□□□□□ -0.4
ZNF880-201ENST00000344085 MAP1SQ66K74 1059 aaPredicted RBP12.54□□□□□ -0.4
ZNF880-201ENST00000344085 CLEC4GQ6UXB4 293 aa12.54□□□□□ -0.4
ZNF880-201ENST00000344085 TPTE2Q6XPS3 522 aa12.54□□□□□ -0.4
ZNF880-201ENST00000344085 C7orf43Q8WVR3 580 aa12.54□□□□□ -0.4
ZNF880-201ENST00000344085 BEGAINQ9BUH8 593 aa12.54□□□□□ -0.4
ZNF880-201ENST00000344085 WDR33Q9C0J8 1336 aaKnown RBP12.54□□□□□ -0.4
ZNF880-201ENST00000344085 BTBD11A6QL63 1104 aa12.53□□□□□ -0.4
ZNF880-201ENST00000344085 LMOD1P29536 600 aaPredicted RBP12.53□□□□□ -0.4
ZNF880-201ENST00000344085 PAXIP1Q6ZW49 1069 aaPredicted RBP12.53□□□□□ -0.4
ZNF880-201ENST00000344085 GPC2Q8N158 579 aa12.53□□□□□ -0.4
ZNF880-201ENST00000344085 JDP2Q8WYK2 163 aa12.53□□□□□ -0.4
ZNF880-201ENST00000344085 SIPA1L3O60292 1781 aaPredicted RBP12.53□□□□□ -0.4
ZNF880-201ENST00000344085 ADAMTSL1Q8N6G6 1762 aa12.53□□□□□ -0.4
ZNF880-201ENST00000344085 FAM177BA6PVY3 158 aa12.52□□□□□ -0.41
ZNF880-201ENST00000344085 GTF2E1P29083 439 aaPredicted RBP12.52□□□□□ -0.41
ZNF880-201ENST00000344085 ALDH1B1P30837 517 aa12.52□□□□□ -0.41
ZNF880-201ENST00000344085 PIP4K2AP48426 406 aaPredicted RBP12.52□□□□□ -0.41
ZNF880-201ENST00000344085 EIF6P56537 245 aaKnown RBP12.52□□□□□ -0.41
ZNF880-201ENST00000344085 CC2D1BQ5T0F9 858 aaKnown RBP12.52□□□□□ -0.41
ZNF880-201ENST00000344085 NIP7Q9Y221 180 aaKnown RBP eCLIP12.52□□□□□ -0.41
ZNF880-201ENST00000344085 KLRG2A4D1S0 409 aaPredicted RBP12.51□□□□□ -0.41
ZNF880-201ENST00000344085 CCDC85CA6NKD9 419 aa12.51□□□□□ -0.41
ZNF880-201ENST00000344085 FZD9O00144 591 aa12.51□□□□□ -0.41
ZNF880-201ENST00000344085 ECE1P42892 770 aa12.51□□□□□ -0.41
ZNF880-201ENST00000344085 GRM1Q13255 1194 aa12.51□□□□□ -0.41
ZNF880-201ENST00000344085 OLFM4Q6UX06 510 aa12.51□□□□□ -0.41
ZNF880-201ENST00000344085 SYNE4Q8N205 404 aa12.51□□□□□ -0.41
ZNF880-201ENST00000344085 DDX21Q9NR30 783 aaKnown RBP eCLIP12.51□□□□□ -0.41
ZNF880-201ENST00000344085 GJA3Q9Y6H8 435 aa12.51□□□□□ -0.41
ZNF880-201ENST00000344085 CEMIPQ8WUJ3 1361 aa12.51□□□□□ -0.41
ZNF880-201ENST00000344085 KCNQ3O43525 872 aa12.5□□□□□ -0.41
ZNF880-201ENST00000344085 SNRPA1P09661 255 aaKnown RBP12.5□□□□□ -0.41
ZNF880-201ENST00000344085 MLLT1Q03111 559 aaPredicted RBP12.5□□□□□ -0.41
ZNF880-201ENST00000344085 CAPNS2Q96L46 248 aa12.5□□□□□ -0.41
ZNF880-201ENST00000344085 PCGF6Q9BYE7 350 aa12.5□□□□□ -0.41
ZNF880-201ENST00000344085 USP16Q9Y5T5 823 aa12.5□□□□□ -0.41
ZNF880-201ENST00000344085 COL3A1P02461 1466 aaPredicted RBP12.49□□□□□ -0.41
ZNF880-201ENST00000344085 RGL2O15211 777 aa12.49□□□□□ -0.41
ZNF880-201ENST00000344085 PSMD1Q99460 953 aa12.49□□□□□ -0.41
ZNF880-201ENST00000344085 THSD7BQ9C0I4 1608 aa12.48□□□□□ -0.41
ZNF880-201ENST00000344085 KIF7Q2M1P5 1343 aa12.48□□□□□ -0.41
ZNF880-201ENST00000344085 CNGB1Q14028 1251 aaPredicted RBP12.48□□□□□ -0.41
ZNF880-201ENST00000344085 CC2D2BQ6DHV5 1058 aa12.48□□□□□ -0.41
ZNF880-201ENST00000344085 RTF1Q92541 710 aaKnown RBP12.48□□□□□ -0.41
ZNF880-201ENST00000344085 GPR101Q96P66 508 aaPredicted RBP12.48□□□□□ -0.41
ZNF880-201ENST00000344085 PRAMEF22A3QJZ6 481 aa12.47□□□□□ -0.41
ZNF880-201ENST00000344085 PRKAR2BP31323 418 aa12.47□□□□□ -0.41
ZNF880-201ENST00000344085 CYP4F22Q6NT55 531 aa12.47□□□□□ -0.41
ZNF880-201ENST00000344085 RPGRQ92834 1020 aaKnown RBP12.47□□□□□ -0.41
ZNF880-201ENST00000344085 NYXQ9GZU5 481 aa12.47□□□□□ -0.41
ZNF880-201ENST00000344085 GRIPAP1Q4V328 841 aa12.46□□□□□ -0.41
ZNF880-201ENST00000344085 USP50Q70EL3 339 aaPredicted RBP12.46□□□□□ -0.41
ZNF880-201ENST00000344085 LARGE2Q8N3Y3 721 aa12.46□□□□□ -0.41
ZNF880-201ENST00000344085 CFAP53Q96M91 514 aa12.46□□□□□ -0.41
ZNF880-201ENST00000344085 CFAP44Q96MT7 982 aa12.46□□□□□ -0.41
ZNF880-201ENST00000344085 ABCC12Q96J65 1359 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms