RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 ANKRD13DQ6ZTN6 518 aa22.9■■□□□ 1.26
HOXA9-201ENST00000343483 PTCD1O75127 700 aaKnown RBP22.89■■□□□ 1.26
HOXA9-201ENST00000343483 FRAT2O75474 233 aaPredicted RBP22.89■■□□□ 1.26
HOXA9-201ENST00000343483 SALL3Q9BXA9 1300 aa22.89■■□□□ 1.26
HOXA9-201ENST00000343483 GLI3P10071 1580 aa22.89■■□□□ 1.26
HOXA9-201ENST00000343483 SHANK3Q9BYB0 1731 aa22.89■■□□□ 1.25
HOXA9-201ENST00000343483 MYD88Q99836 296 aa22.89■■□□□ 1.25
HOXA9-201ENST00000343483 NRAPQ86VF7 1730 aa22.89■■□□□ 1.25
HOXA9-201ENST00000343483 CASC1Q6TDU7 716 aa22.88■■□□□ 1.25
HOXA9-201ENST00000343483 METTL22Q9BUU2 404 aaPredicted RBP22.88■■□□□ 1.25
HOXA9-201ENST00000343483 ATRNO75882 1429 aa22.88■■□□□ 1.25
HOXA9-201ENST00000343483 MTX1Q13505 466 aa22.88■■□□□ 1.25
HOXA9-201ENST00000343483 TRPC5Q9UL62 973 aaPredicted RBP22.88■■□□□ 1.25
HOXA9-201ENST00000343483 NWD2Q9ULI1 1742 aa22.87■■□□□ 1.25
HOXA9-201ENST00000343483 NEURL1BA8MQ27 555 aa22.87■■□□□ 1.25
HOXA9-201ENST00000343483 RHPN1Q8TCX5 695 aa22.87■■□□□ 1.25
HOXA9-201ENST00000343483 TMOD3Q9NYL9 352 aa22.87■■□□□ 1.25
HOXA9-201ENST00000343483 CCDC9Q9Y3X0 531 aaKnown RBP22.87■■□□□ 1.25
HOXA9-201ENST00000343483 EP400Q96L91 3159 aa22.87■■□□□ 1.25
HOXA9-201ENST00000343483 UTYO14607 1347 aa22.86■■□□□ 1.25
HOXA9-201ENST00000343483 RXRBP28702 533 aa22.86■■□□□ 1.25
HOXA9-201ENST00000343483 KIF1BPQ96EK5 621 aa22.86■■□□□ 1.25
HOXA9-201ENST00000343483 SUCLG2Q96I99 432 aa22.86■■□□□ 1.25
HOXA9-201ENST00000343483 ANTXR1Q9H6X2 564 aa22.86■■□□□ 1.25
HOXA9-201ENST00000343483 OS9Q13438 667 aaPredicted RBP22.86■■□□□ 1.25
HOXA9-201ENST00000343483 HSP90AB4PQ58FF6 505 aa22.86■■□□□ 1.25
HOXA9-201ENST00000343483 EIF5BO60841 1220 aaKnown RBP22.85■■□□□ 1.25
HOXA9-201ENST00000343483 GCKRQ14397 625 aa22.85■■□□□ 1.25
HOXA9-201ENST00000343483 KCPQ6ZWJ8 1503 aa22.85■■□□□ 1.25
HOXA9-201ENST00000343483 NUTM1Q86Y26 1132 aa22.85■■□□□ 1.25
HOXA9-201ENST00000343483 GJD4Q96KN9 370 aaPredicted RBP22.85■■□□□ 1.25
HOXA9-201ENST00000343483 BICC1Q9H694 974 aaKnown RBP22.85■■□□□ 1.25
HOXA9-201ENST00000343483 LAMB4A4D0S4 1761 aa22.85■■□□□ 1.25
HOXA9-201ENST00000343483 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.84■■□□□ 1.25
HOXA9-201ENST00000343483 NBPF26B4DH59 902 aa22.84■■□□□ 1.25
HOXA9-201ENST00000343483 NBPF14Q5TI25 921 aa22.84■■□□□ 1.25
HOXA9-201ENST00000343483 NBPF10Q6P3W6 841 aaKnown RBP22.84■■□□□ 1.25
HOXA9-201ENST00000343483 NBPF15Q8N660 670 aa22.84■■□□□ 1.25
HOXA9-201ENST00000343483 STAP2Q9UGK3 403 aa22.84■■□□□ 1.25
HOXA9-201ENST00000343483 ERBB4Q15303 1308 aa22.83■■□□□ 1.25
HOXA9-201ENST00000343483 KAZALD1Q96I82 304 aa22.83■■□□□ 1.25
HOXA9-201ENST00000343483 RBM6P78332 1123 aaKnown RBP22.83■■□□□ 1.24
HOXA9-201ENST00000343483 UBR2Q8IWV8 1755 aa22.82■■□□□ 1.24
HOXA9-201ENST00000343483 TNS2Q63HR2 1409 aa22.82■■□□□ 1.24
HOXA9-201ENST00000343483 A1BGP04217 495 aa22.82■■□□□ 1.24
HOXA9-201ENST00000343483 PLBD2Q8NHP8 589 aa22.82■■□□□ 1.24
HOXA9-201ENST00000343483 PAPPAQ13219 1627 aa22.82■■□□□ 1.24
HOXA9-201ENST00000343483 DISP2A7MBM2 1401 aa22.82■■□□□ 1.24
HOXA9-201ENST00000343483 VPS72Q15906 364 aa22.81■■□□□ 1.24
HOXA9-201ENST00000343483 PA2G4Q9UQ80 394 aaKnown RBP22.81■■□□□ 1.24
HOXA9-201ENST00000343483 TOGARAM1Q9Y4F4 1720 aa22.81■■□□□ 1.24
HOXA9-201ENST00000343483 TRIM6-TRIM34B2RNG4 842 aa22.81■■□□□ 1.24
HOXA9-201ENST00000343483 HSCBQ8IWL3 235 aa22.81■■□□□ 1.24
HOXA9-201ENST00000343483 SPRYD3Q8NCJ5 442 aa22.81■■□□□ 1.24
HOXA9-201ENST00000343483 ATP5J2-PTCD1G3V325 749 aa22.8■■□□□ 1.24
HOXA9-201ENST00000343483 GSE1Q14687 1217 aa22.8■■□□□ 1.24
HOXA9-201ENST00000343483 PIGBQ92521 554 aa22.8■■□□□ 1.24
HOXA9-201ENST00000343483 RILPL2Q969X0 211 aa22.8■■□□□ 1.24
HOXA9-201ENST00000343483 AOX1Q06278 1338 aa22.8■■□□□ 1.24
HOXA9-201ENST00000343483 KIF2CQ99661 725 aa22.8■■□□□ 1.24
HOXA9-201ENST00000343483 ASAP1Q9ULH1 1129 aa22.79■■□□□ 1.24
HOXA9-201ENST00000343483 JARID2Q92833 1246 aaPredicted RBP22.78■■□□□ 1.24
HOXA9-201ENST00000343483 EXOC5O00471 708 aa22.78■■□□□ 1.24
HOXA9-201ENST00000343483 FAM98CQ17RN3 349 aaKnown RBP22.78■■□□□ 1.24
HOXA9-201ENST00000343483 TTLL7Q6ZT98 887 aa22.78■■□□□ 1.24
HOXA9-201ENST00000343483 UBE3BQ7Z3V4 1068 aa22.77■■□□□ 1.24
HOXA9-201ENST00000343483 ERC1Q8IUD2 1116 aa22.77■■□□□ 1.24
HOXA9-201ENST00000343483 USP26Q9BXU7 913 aa22.77■■□□□ 1.24
HOXA9-201ENST00000343483 SPATA31A5Q5VU36 1347 aa22.77■■□□□ 1.24
HOXA9-201ENST00000343483 SPATA31A7Q8IWB4 1347 aa22.77■■□□□ 1.24
HOXA9-201ENST00000343483 ERC2O15083 957 aa22.77■■□□□ 1.23
HOXA9-201ENST00000343483 REC8O95072 547 aa22.77■■□□□ 1.23
HOXA9-201ENST00000343483 EPHA10Q5JZY3 1008 aa22.76■■□□□ 1.23
HOXA9-201ENST00000343483 CLASRPQ8N2M8 674 aaKnown RBP22.76■■□□□ 1.23
HOXA9-201ENST00000343483 ARFGEF2Q9Y6D5 1785 aa22.76■■□□□ 1.23
HOXA9-201ENST00000343483 A0A087WZG4 1122 aa22.75■■□□□ 1.23
HOXA9-201ENST00000343483 SNX21Q969T3 373 aa22.75■■□□□ 1.23
HOXA9-201ENST00000343483 ZBTB3Q9H5J0 574 aa22.75■■□□□ 1.23
HOXA9-201ENST00000343483 ATG3Q9NT62 314 aa22.75■■□□□ 1.23
HOXA9-201ENST00000343483 SPATA31A1Q5TZJ5 1347 aa22.75■■□□□ 1.23
HOXA9-201ENST00000343483 G3BP1Q13283 466 aaKnown RBP eCLIP22.74■■□□□ 1.23
HOXA9-201ENST00000343483 PI4K2BQ8TCG2 481 aa22.74■■□□□ 1.23
HOXA9-201ENST00000343483 SYTL4Q96C24 671 aaPredicted RBP22.74■■□□□ 1.23
HOXA9-201ENST00000343483 RBM42Q9BTD8 480 aaKnown RBP22.74■■□□□ 1.23
HOXA9-201ENST00000343483 SIL1Q9H173 461 aa22.73■■□□□ 1.23
HOXA9-201ENST00000343483 ZNF330Q9Y3S2 320 aaPredicted RBP22.73■■□□□ 1.23
HOXA9-201ENST00000343483 MAP4K4O95819 1239 aaPredicted RBP22.73■■□□□ 1.23
HOXA9-201ENST00000343483 A0A0G2JS52 829 aa22.72■■□□□ 1.23
HOXA9-201ENST00000343483 DNAJC10Q8IXB1 793 aa22.72■■□□□ 1.23
HOXA9-201ENST00000343483 KLHDC4Q8TBB5 520 aa22.72■■□□□ 1.23
HOXA9-201ENST00000343483 IFIT2P09913 472 aaKnown RBP22.72■■□□□ 1.23
HOXA9-201ENST00000343483 CHMLP26374 656 aa22.72■■□□□ 1.23
HOXA9-201ENST00000343483 CHMP5Q9NZZ3 219 aa22.72■■□□□ 1.23
HOXA9-201ENST00000343483 VSIG10Q8N0Z9 540 aa22.71■■□□□ 1.23
HOXA9-201ENST00000343483 ESYT1Q9BSJ8 1104 aa22.71■■□□□ 1.23
HOXA9-201ENST00000343483 TEX13AQ9BXU3 409 aaPredicted RBP22.71■■□□□ 1.23
HOXA9-201ENST00000343483 BCL9O00512 1426 aa22.71■■□□□ 1.23
HOXA9-201ENST00000343483 AFDNP55196 1824 aaKnown RBP22.7■■□□□ 1.23
HOXA9-201ENST00000343483 TUBGCP6Q96RT7 1819 aa22.7■■□□□ 1.23
HOXA9-201ENST00000343483 AACSQ86V21 672 aa22.7■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms