RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 KRT32Q14532 448 aa19.35■□□□□ 0.69
RDX-201ENST00000343115 VPS37DQ86XT2 251 aa19.35■□□□□ 0.69
RDX-201ENST00000343115 TET3O43151 1660 aa19.35■□□□□ 0.69
RDX-201ENST00000343115 KSR2Q6VAB6 950 aa19.34■□□□□ 0.69
RDX-201ENST00000343115 PRR36Q9H6K5 1346 aa19.34■□□□□ 0.69
RDX-201ENST00000343115 ANKRD13DQ6ZTN6 518 aa19.34■□□□□ 0.69
RDX-201ENST00000343115 MTMR7Q9Y216 660 aa19.34■□□□□ 0.69
RDX-201ENST00000343115 E9PCH4 1651 aa19.34■□□□□ 0.69
RDX-201ENST00000343115 NFATC2IPQ8NCF5 419 aa19.34■□□□□ 0.69
RDX-201ENST00000343115 USP44Q9H0E7 712 aa19.34■□□□□ 0.69
RDX-201ENST00000343115 IDH1O75874 414 aaKnown RBP19.33■□□□□ 0.69
RDX-201ENST00000343115 FAM173BQ6P4H8 233 aa19.33■□□□□ 0.69
RDX-201ENST00000343115 SHROOM2Q13796 1616 aa19.33■□□□□ 0.69
RDX-201ENST00000343115 IFIT1P09914 478 aaKnown RBP19.33■□□□□ 0.69
RDX-201ENST00000343115 HAND2P61296 217 aa19.33■□□□□ 0.69
RDX-201ENST00000343115 TTC12Q9H892 705 aaPredicted RBP19.33■□□□□ 0.69
RDX-201ENST00000343115 EFCAB6Q5THR3 1501 aa19.33■□□□□ 0.68
RDX-201ENST00000343115 ZNF853P0CG23 659 aa19.33■□□□□ 0.68
RDX-201ENST00000343115 UBE2HP62256 183 aa19.33■□□□□ 0.68
RDX-201ENST00000343115 KIF6Q6ZMV9 814 aa19.33■□□□□ 0.68
RDX-201ENST00000343115 ZNF396Q96N95 335 aaPredicted RBP19.33■□□□□ 0.68
RDX-201ENST00000343115 LMBRD1Q9NUN5 540 aa19.33■□□□□ 0.68
RDX-201ENST00000343115 NMIQ13287 307 aaPredicted RBP19.32■□□□□ 0.68
RDX-201ENST00000343115 GCP02774 474 aa19.32■□□□□ 0.68
RDX-201ENST00000343115 SYT1P21579 422 aa19.32■□□□□ 0.68
RDX-201ENST00000343115 NBPF6Q5VWK0 638 aa19.32■□□□□ 0.68
RDX-201ENST00000343115 BRF1Q92994 677 aa19.32■□□□□ 0.68
RDX-201ENST00000343115 NBPF4Q96M43 638 aa19.32■□□□□ 0.68
RDX-201ENST00000343115 HMGN5P82970 282 aaKnown RBP19.31■□□□□ 0.68
RDX-201ENST00000343115 AKAP4Q5JQC9 854 aa19.31■□□□□ 0.68
RDX-201ENST00000343115 CFAP45Q9UL16 551 aa19.31■□□□□ 0.68
RDX-201ENST00000343115 HECW2Q9P2P5 1572 aa19.31■□□□□ 0.68
RDX-201ENST00000343115 SAFBQ15424 915 aaKnown RBP eCLIP19.31■□□□□ 0.68
RDX-201ENST00000343115 SCAND2PQ9GZW5 306 aaPredicted RBP19.31■□□□□ 0.68
RDX-201ENST00000343115 TBC1D2BQ9UPU7 963 aa19.31■□□□□ 0.68
RDX-201ENST00000343115 PLEKHG3A1L390 1219 aa19.31■□□□□ 0.68
RDX-201ENST00000343115 UNC5CLQ8IV45 518 aa19.31■□□□□ 0.68
RDX-201ENST00000343115 NAT10Q9H0A0 1025 aaKnown RBP19.31■□□□□ 0.68
RDX-201ENST00000343115 NDUFB9Q9Y6M9 179 aa19.31■□□□□ 0.68
RDX-201ENST00000343115 PIP4K2BP78356 416 aa19.31■□□□□ 0.68
RDX-201ENST00000343115 PDILTQ8N807 584 aa19.31■□□□□ 0.68
RDX-201ENST00000343115 ERICH2A1L162 156 aa19.3■□□□□ 0.68
RDX-201ENST00000343115 RRP9O43818 475 aaKnown RBP19.3■□□□□ 0.68
RDX-201ENST00000343115 POLR1AO95602 1720 aaPredicted RBP19.3■□□□□ 0.68
RDX-201ENST00000343115 NUTM2BA6NNL0 878 aaPredicted RBP19.3■□□□□ 0.68
RDX-201ENST00000343115 NUTM2EB1AL46 878 aaPredicted RBP19.3■□□□□ 0.68
RDX-201ENST00000343115 NUTM2AQ8IVF1 878 aaPredicted RBP19.3■□□□□ 0.68
RDX-201ENST00000343115 LINS1Q8NG48 757 aa19.3■□□□□ 0.68
RDX-201ENST00000343115 ORAI2Q96SN7 254 aa19.3■□□□□ 0.68
RDX-201ENST00000343115 TMEM63CQ9P1W3 806 aa19.3■□□□□ 0.68
RDX-201ENST00000343115 GADD45BO75293 160 aaPredicted RBP19.29■□□□□ 0.68
RDX-201ENST00000343115 SPHKAPQ2M3C7 1700 aa19.29■□□□□ 0.68
RDX-201ENST00000343115 F13A1P00488 732 aa19.29■□□□□ 0.68
RDX-201ENST00000343115 GPTP24298 496 aa19.29■□□□□ 0.68
RDX-201ENST00000343115 LMBR1LQ6UX01 489 aa19.29■□□□□ 0.68
RDX-201ENST00000343115 TBX22Q9Y458 520 aa19.29■□□□□ 0.68
RDX-201ENST00000343115 SBNO1A3KN83 1393 aa19.29■□□□□ 0.68
RDX-201ENST00000343115 TMEM2Q9UHN6 1383 aa19.29■□□□□ 0.68
RDX-201ENST00000343115 DHX16O60231 1041 aaKnown RBP19.29■□□□□ 0.68
RDX-201ENST00000343115 CCDC82Q8N4S0 544 aa19.29■□□□□ 0.68
RDX-201ENST00000343115 NEK1Q96PY6 1258 aa19.29■□□□□ 0.68
RDX-201ENST00000343115 BICC1Q9H694 974 aaKnown RBP19.29■□□□□ 0.68
RDX-201ENST00000343115 TPM3P06753 285 aa19.28■□□□□ 0.68
RDX-201ENST00000343115 IFNL2Q8IZJ0 200 aa19.28■□□□□ 0.68
RDX-201ENST00000343115 IP6K1Q92551 441 aa19.28■□□□□ 0.68
RDX-201ENST00000343115 FAM227BQ96M60 508 aa19.28■□□□□ 0.68
RDX-201ENST00000343115 RNF17Q9BXT8 1623 aaKnown RBP19.28■□□□□ 0.68
RDX-201ENST00000343115 CHST3Q7LGC8 479 aa19.27■□□□□ 0.68
RDX-201ENST00000343115 SNX14Q9Y5W7 946 aa19.27■□□□□ 0.68
RDX-201ENST00000343115 ABCA6Q8N139 1617 aa19.27■□□□□ 0.68
RDX-201ENST00000343115 ALDH1L1O75891 902 aa19.27■□□□□ 0.68
RDX-201ENST00000343115 METTL24Q5JXM2 366 aa19.27■□□□□ 0.68
RDX-201ENST00000343115 DDX17Q92841 729 aaKnown RBP19.27■□□□□ 0.68
RDX-201ENST00000343115 U3KPZ7 1027 aaPredicted RBP19.27■□□□□ 0.68
RDX-201ENST00000343115 SGSM2O43147 1006 aa19.26■□□□□ 0.67
RDX-201ENST00000343115 PRKCSHP14314 528 aaPredicted RBP19.26■□□□□ 0.67
RDX-201ENST00000343115 CREB3L3Q68CJ9 461 aa19.26■□□□□ 0.67
RDX-201ENST00000343115 DACT1Q9NYF0 836 aa19.26■□□□□ 0.67
RDX-201ENST00000343115 INTS4Q96HW7 963 aaKnown RBP19.26■□□□□ 0.67
RDX-201ENST00000343115 MAP7D2Q96T17 732 aa19.26■□□□□ 0.67
RDX-201ENST00000343115 ABCC3O15438 1527 aa19.26■□□□□ 0.67
RDX-201ENST00000343115 SNRPA1P09661 255 aaKnown RBP19.25■□□□□ 0.67
RDX-201ENST00000343115 EDC3Q96F86 508 aaKnown RBP19.25■□□□□ 0.67
RDX-201ENST00000343115 KIAA0232Q92628 1395 aa19.25■□□□□ 0.67
RDX-201ENST00000343115 RNMTO43148 476 aaKnown RBP19.25■□□□□ 0.67
RDX-201ENST00000343115 FAM177A1Q8N128 213 aaPredicted RBP19.25■□□□□ 0.67
RDX-201ENST00000343115 ZKSCAN5Q9Y2L8 839 aa19.25■□□□□ 0.67
RDX-201ENST00000343115 ZNF165P49910 485 aa19.25■□□□□ 0.67
RDX-201ENST00000343115 BRPF1P55201 1214 aaPredicted RBP19.25■□□□□ 0.67
RDX-201ENST00000343115 ZNF771Q7L3S4 317 aaPredicted RBP19.25■□□□□ 0.67
RDX-201ENST00000343115 NUP133Q8WUM0 1156 aa19.25■□□□□ 0.67
RDX-201ENST00000343115 BIN1O00499 593 aa19.25■□□□□ 0.67
RDX-201ENST00000343115 POLR3DP05423 398 aaPredicted RBP19.25■□□□□ 0.67
RDX-201ENST00000343115 ABCA9Q8IUA7 1624 aa19.25■□□□□ 0.67
RDX-201ENST00000343115 ROBO2Q9HCK4 1378 aa19.24■□□□□ 0.67
RDX-201ENST00000343115 IMMTQ16891 758 aaKnown RBP19.24■□□□□ 0.67
RDX-201ENST00000343115 C16orf45Q96MC5 204 aaPredicted RBP19.24■□□□□ 0.67
RDX-201ENST00000343115 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.24■□□□□ 0.674e-7■■□□□ 11.4
RDX-201ENST00000343115 OLFM4Q6UX06 510 aa19.23■□□□□ 0.67
RDX-201ENST00000343115 FAM135BQ49AJ0 1406 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms