RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 NPHP3Q7Z494 1330 aa14.6□□□□□ -0.07
SSX2IP-201ENST00000342203 IDI1Q13907 227 aa14.6□□□□□ -0.07
SSX2IP-201ENST00000342203 ABTB2Q8N961 1025 aa14.6□□□□□ -0.07
SSX2IP-201ENST00000342203 CCDC191Q8NCU4 936 aa14.6□□□□□ -0.07
SSX2IP-201ENST00000342203 SMARCE1Q969G3 411 aa14.6□□□□□ -0.07
SSX2IP-201ENST00000342203 LIG1P18858 919 aa14.6□□□□□ -0.07
SSX2IP-201ENST00000342203 PDIA4P13667 645 aaKnown RBP14.59□□□□□ -0.07
SSX2IP-201ENST00000342203 USHBP1Q8N6Y0 703 aa14.59□□□□□ -0.07
SSX2IP-201ENST00000342203 ARFGAP3Q9NP61 516 aa14.59□□□□□ -0.07
SSX2IP-201ENST00000342203 ZNF215Q9UL58 517 aaPredicted RBP14.59□□□□□ -0.07
SSX2IP-201ENST00000342203 KDM5CP41229 1560 aa14.59□□□□□ -0.07
SSX2IP-201ENST00000342203 PI4KAP2A4QPH2 592 aa14.59□□□□□ -0.07
SSX2IP-201ENST00000342203 PI4KAP1Q8N8J0 262 aa14.59□□□□□ -0.07
SSX2IP-201ENST00000342203 NPC1L1Q9UHC9 1359 aa14.59□□□□□ -0.07
SSX2IP-201ENST00000342203 CLSTN1O94985 981 aa14.59□□□□□ -0.07
SSX2IP-201ENST00000342203 CCDC12Q8WUD4 166 aaPredicted RBP14.59□□□□□ -0.07
SSX2IP-201ENST00000342203 C8orf76Q96K31 380 aa14.59□□□□□ -0.07
SSX2IP-201ENST00000342203 RPGRIP1LQ68CZ1 1315 aa14.59□□□□□ -0.07
SSX2IP-201ENST00000342203 EPB41L2O43491 1005 aaKnown RBP14.58□□□□□ -0.07
SSX2IP-201ENST00000342203 ANKRD36BQ8N2N9 1353 aa14.58□□□□□ -0.07
SSX2IP-201ENST00000342203 HSP90AB2PQ58FF8 381 aa14.58□□□□□ -0.08
SSX2IP-201ENST00000342203 RSPH14Q9UHP6 348 aa14.58□□□□□ -0.08
SSX2IP-201ENST00000342203 ATP8B2P98198 1209 aa14.58□□□□□ -0.08
SSX2IP-201ENST00000342203 GABPB1Q06547 395 aaPredicted RBP14.58□□□□□ -0.08
SSX2IP-201ENST00000342203 DHX8Q14562 1220 aaKnown RBP14.58□□□□□ -0.08
SSX2IP-201ENST00000342203 ATP2B3Q16720 1220 aa14.58□□□□□ -0.08
SSX2IP-201ENST00000342203 ZNF530Q6P9A1 599 aaPredicted RBP14.58□□□□□ -0.08
SSX2IP-201ENST00000342203 NRBP1Q9UHY1 535 aa14.58□□□□□ -0.08
SSX2IP-201ENST00000342203 NSD2O96028 1365 aa14.58□□□□□ -0.08
SSX2IP-201ENST00000342203 CCDC82Q8N4S0 544 aa14.58□□□□□ -0.08
SSX2IP-201ENST00000342203 IFNKQ9P0W0 207 aa14.58□□□□□ -0.08
SSX2IP-201ENST00000342203 ZNF692Q9BU19 519 aaPredicted RBP14.58□□□□□ -0.08
SSX2IP-201ENST00000342203 GNAT3A8MTJ3 354 aa14.57□□□□□ -0.08
SSX2IP-201ENST00000342203 DENND4BO75064 1496 aaPredicted RBP14.57□□□□□ -0.08
SSX2IP-201ENST00000342203 BCORL1Q5H9F3 1711 aa14.57□□□□□ -0.08
SSX2IP-201ENST00000342203 ZNF75DP51815 510 aa14.57□□□□□ -0.08
SSX2IP-201ENST00000342203 DNAAF4Q8WXU2 420 aa14.57□□□□□ -0.08
SSX2IP-201ENST00000342203 FOXO3O43524 673 aa14.57□□□□□ -0.08
SSX2IP-201ENST00000342203 KIAA0754O94854 1291 aa14.57□□□□□ -0.08
SSX2IP-201ENST00000342203 MTMR7Q9Y216 660 aa14.57□□□□□ -0.08
SSX2IP-201ENST00000342203 MSH6P52701 1360 aa14.57□□□□□ -0.08
SSX2IP-201ENST00000342203 CCDC85AQ96PX6 553 aaPredicted RBP14.57□□□□□ -0.08
SSX2IP-201ENST00000342203 CRACR2AQ9BSW2 395 aa14.57□□□□□ -0.08
SSX2IP-201ENST00000342203 PA2G4Q9UQ80 394 aaKnown RBP14.57□□□□□ -0.08
SSX2IP-201ENST00000342203 ERO1AQ96HE7 468 aa14.56□□□□□ -0.08
SSX2IP-201ENST00000342203 RAI14Q9P0K7 980 aa14.56□□□□□ -0.08
SSX2IP-201ENST00000342203 TXLNBQ8N3L3 684 aa14.56□□□□□ -0.08
SSX2IP-201ENST00000342203 NEK1Q96PY6 1258 aa14.56□□□□□ -0.08
SSX2IP-201ENST00000342203 ERICH2A1L162 156 aa14.56□□□□□ -0.08
SSX2IP-201ENST00000342203 CAVIN2O95810 425 aa14.56□□□□□ -0.08
SSX2IP-201ENST00000342203 UBASH3AP57075 661 aa14.56□□□□□ -0.08
SSX2IP-201ENST00000342203 EVI5LQ96CN4 794 aa14.56□□□□□ -0.08
SSX2IP-201ENST00000342203 KIF5CO60282 957 aa14.56□□□□□ -0.08
SSX2IP-201ENST00000342203 CAPN2P17655 700 aa14.56□□□□□ -0.08
SSX2IP-201ENST00000342203 LARP1Q6PKG0 1096 aaKnown RBP14.56□□□□□ -0.08
SSX2IP-201ENST00000342203 SLC52A1Q9NWF4 448 aa14.56□□□□□ -0.08
SSX2IP-201ENST00000342203 KDM5BQ9UGL1 1544 aa14.56□□□□□ -0.08
SSX2IP-201ENST00000342203 MARCH6O60337 910 aa14.56□□□□□ -0.08
SSX2IP-201ENST00000342203 GTF2A1P52655 376 aaPredicted RBP14.56□□□□□ -0.08
SSX2IP-201ENST00000342203 SNX14Q9Y5W7 946 aa14.56□□□□□ -0.08
SSX2IP-201ENST00000342203 PNMA6EA0A0J9YXQ4 647 aa14.55□□□□□ -0.08
SSX2IP-201ENST00000342203 NAA30Q147X3 362 aaPredicted RBP14.55□□□□□ -0.08
SSX2IP-201ENST00000342203 ERCC6LQ2NKX8 1250 aa14.55□□□□□ -0.08
SSX2IP-201ENST00000342203 KRBA2Q6ZNG9 492 aa14.55□□□□□ -0.08
SSX2IP-201ENST00000342203 SIRT2Q8IXJ6 389 aa14.55□□□□□ -0.08
SSX2IP-201ENST00000342203 DNMT1P26358 1616 aaKnown RBP14.55□□□□□ -0.08
SSX2IP-201ENST00000342203 PPIP5K1Q6PFW1 1433 aa14.55□□□□□ -0.08
SSX2IP-201ENST00000342203 CCDC150Q8NCX0 1101 aa14.55□□□□□ -0.08
SSX2IP-201ENST00000342203 HAND2P61296 217 aa14.54□□□□□ -0.08
SSX2IP-201ENST00000342203 ZSCAN25Q6NSZ9 544 aa14.54□□□□□ -0.08
SSX2IP-201ENST00000342203 PSME1Q06323 249 aa14.54□□□□□ -0.08
SSX2IP-201ENST00000342203 IBTKQ9P2D0 1353 aaPredicted RBP14.54□□□□□ -0.08
SSX2IP-201ENST00000342203 BTBD11A6QL63 1104 aa14.54□□□□□ -0.08
SSX2IP-201ENST00000342203 ZMYM3Q14202 1370 aa14.54□□□□□ -0.08
SSX2IP-201ENST00000342203 KARSQ15046 597 aaKnown RBP14.54□□□□□ -0.08
SSX2IP-201ENST00000342203 UTP14CQ5TAP6 766 aaKnown RBP14.54□□□□□ -0.08
SSX2IP-201ENST00000342203 KIAA1524Q8TCG1 905 aa14.54□□□□□ -0.08
SSX2IP-201ENST00000342203 CDC37L1Q7L3B6 337 aa14.53□□□□□ -0.08
SSX2IP-201ENST00000342203 PDLIM2Q96JY6 352 aa14.53□□□□□ -0.08
SSX2IP-201ENST00000342203 ZNF608Q9ULD9 1512 aaPredicted RBP14.53□□□□□ -0.08
SSX2IP-201ENST00000342203 MARCKSP29966 332 aaPredicted RBP14.53□□□□□ -0.08
SSX2IP-201ENST00000342203 CHST3Q7LGC8 479 aa14.53□□□□□ -0.08
SSX2IP-201ENST00000342203 CNNM3Q8NE01 707 aa14.53□□□□□ -0.08
SSX2IP-201ENST00000342203 UTP14AQ9BVJ6 771 aaKnown RBP14.53□□□□□ -0.08
SSX2IP-201ENST00000342203 NLRP2Q9NX02 1062 aa14.53□□□□□ -0.08
SSX2IP-201ENST00000342203 SMARCC1Q92922 1105 aaPredicted RBP14.53□□□□□ -0.08
SSX2IP-201ENST00000342203 CARD6Q9BX69 1037 aa14.53□□□□□ -0.08
SSX2IP-201ENST00000342203 EVCP57679 992 aa14.53□□□□□ -0.08
SSX2IP-201ENST00000342203 NUP133Q8WUM0 1156 aa14.53□□□□□ -0.08
SSX2IP-201ENST00000342203 VPS18Q9P253 973 aa14.53□□□□□ -0.08
SSX2IP-201ENST00000342203 PUF60Q9UHX1 559 aaKnown RBP14.53□□□□□ -0.08
SSX2IP-201ENST00000342203 CREB3L3Q68CJ9 461 aa14.53□□□□□ -0.08
SSX2IP-201ENST00000342203 SLC26A8Q96RN1 970 aa14.53□□□□□ -0.08
SSX2IP-201ENST00000342203 A0A1W2PP64 1363 aa14.52□□□□□ -0.08
SSX2IP-201ENST00000342203 ATP10BO94823 1461 aa14.52□□□□□ -0.08
SSX2IP-201ENST00000342203 A0A1B0GVL5 298 aa14.52□□□□□ -0.08
SSX2IP-201ENST00000342203 IRX3P78415 501 aaPredicted RBP14.52□□□□□ -0.08
SSX2IP-201ENST00000342203 NMIQ13287 307 aaPredicted RBP14.52□□□□□ -0.08
SSX2IP-201ENST00000342203 Q6ZUG5 572 aa14.52□□□□□ -0.08
SSX2IP-201ENST00000342203 DDX46Q7L014 1031 aaKnown RBP14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms