RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 MYRIPQ8NFW9 859 aa11.21□□□□□ -0.62
TRERF1-201ENST00000340840 FERMT3Q86UX7 667 aa11.2□□□□□ -0.62
TRERF1-201ENST00000340840 AACSQ86V21 672 aa11.2□□□□□ -0.62
TRERF1-201ENST00000340840 SCAND2PQ9GZW5 306 aaPredicted RBP11.2□□□□□ -0.62
TRERF1-201ENST00000340840 SNX14Q9Y5W7 946 aa11.2□□□□□ -0.62
TRERF1-201ENST00000340840 CDC42BPGQ6DT37 1551 aa11.2□□□□□ -0.62
TRERF1-201ENST00000340840 NEXNQ0ZGT2 675 aa11.2□□□□□ -0.62
TRERF1-201ENST00000340840 SPATA32Q96LK8 384 aa11.2□□□□□ -0.62
TRERF1-201ENST00000340840 DIP2BQ9P265 1576 aa11.2□□□□□ -0.62
TRERF1-201ENST00000340840 PDCL2Q8N4E4 241 aa11.2□□□□□ -0.62
TRERF1-201ENST00000340840 PLEKHG3A1L390 1219 aa11.2□□□□□ -0.62
TRERF1-201ENST00000340840 DNM1Q05193 864 aaKnown RBP11.2□□□□□ -0.62
TRERF1-201ENST00000340840 SSH3Q8TE77 659 aa11.19□□□□□ -0.62
TRERF1-201ENST00000340840 SF3B2Q13435 895 aaKnown RBP11.19□□□□□ -0.62
TRERF1-201ENST00000340840 EVI5LQ96CN4 794 aa11.19□□□□□ -0.62
TRERF1-201ENST00000340840 BABAM1Q9NWV8 329 aa11.19□□□□□ -0.62
TRERF1-201ENST00000340840 SBNO1A3KN83 1393 aa11.19□□□□□ -0.62
TRERF1-201ENST00000340840 TTC41PQ6P2S7 1318 aa11.19□□□□□ -0.62
TRERF1-201ENST00000340840 ZNF335Q9H4Z2 1342 aaPredicted RBP11.19□□□□□ -0.62
TRERF1-201ENST00000340840 PI4KAP2A4QPH2 592 aa11.19□□□□□ -0.62
TRERF1-201ENST00000340840 PI4KAP1Q8N8J0 262 aa11.19□□□□□ -0.62
TRERF1-201ENST00000340840 FAM200AQ8TCP9 573 aa11.19□□□□□ -0.62
TRERF1-201ENST00000340840 CCDC94Q9BW85 323 aaPredicted RBP11.19□□□□□ -0.62
TRERF1-201ENST00000340840 STRN4Q9NRL3 753 aa11.19□□□□□ -0.62
TRERF1-201ENST00000340840 METP08581 1390 aa11.19□□□□□ -0.62
TRERF1-201ENST00000340840 VPS53Q5VIR6 699 aa11.18□□□□□ -0.62
TRERF1-201ENST00000340840 ZNF592Q92610 1267 aa11.18□□□□□ -0.62
TRERF1-201ENST00000340840 CHMP4CQ96CF2 233 aa11.18□□□□□ -0.62
TRERF1-201ENST00000340840 USP44Q9H0E7 712 aa11.18□□□□□ -0.62
TRERF1-201ENST00000340840 DLC1Q96QB1 1528 aa11.18□□□□□ -0.62
TRERF1-201ENST00000340840 CCDC73Q6ZRK6 1079 aa11.18□□□□□ -0.62
TRERF1-201ENST00000340840 UNC5CLQ8IV45 518 aa11.18□□□□□ -0.62
TRERF1-201ENST00000340840 DDX19AQ9NUU7 478 aaKnown RBP11.18□□□□□ -0.62
TRERF1-201ENST00000340840 DDX54Q8TDD1 881 aaKnown RBP11.18□□□□□ -0.62
TRERF1-201ENST00000340840 CAMK4Q16566 473 aa11.17□□□□□ -0.62
TRERF1-201ENST00000340840 TPD52L1Q16890 204 aaPredicted RBP11.17□□□□□ -0.62
TRERF1-201ENST00000340840 PLEKHO1Q53GL0 409 aaPredicted RBP11.17□□□□□ -0.62
TRERF1-201ENST00000340840 KIF20BQ96Q89 1820 aa11.17□□□□□ -0.62
TRERF1-201ENST00000340840 DIP2CQ9Y2E4 1556 aa11.17□□□□□ -0.62
TRERF1-201ENST00000340840 MAP3K5Q99683 1374 aa11.17□□□□□ -0.62
TRERF1-201ENST00000340840 TPM4P67936 248 aa11.17□□□□□ -0.62
TRERF1-201ENST00000340840 ZNF530Q6P9A1 599 aaPredicted RBP11.17□□□□□ -0.62
TRERF1-201ENST00000340840 SMAP1Q8IYB5 467 aaPredicted RBP11.17□□□□□ -0.62
TRERF1-201ENST00000340840 AK9Q5TCS8 1911 aa11.17□□□□□ -0.62
TRERF1-201ENST00000340840 KRT32Q14532 448 aa11.17□□□□□ -0.62
TRERF1-201ENST00000340840 CERKQ8TCT0 537 aa11.17□□□□□ -0.62
TRERF1-201ENST00000340840 PRR36Q9H6K5 1346 aa11.17□□□□□ -0.62
TRERF1-201ENST00000340840 ANKRD26Q9UPS8 1709 aa11.17□□□□□ -0.62
TRERF1-201ENST00000340840 TMEM87AQ8NBN3 555 aa11.17□□□□□ -0.62
TRERF1-201ENST00000340840 PRDM10Q9NQV6 1147 aa11.17□□□□□ -0.62
TRERF1-201ENST00000340840 STK3Q13188 491 aa11.16□□□□□ -0.62
TRERF1-201ENST00000340840 NECAB1Q8N987 351 aa11.16□□□□□ -0.62
TRERF1-201ENST00000340840 CCDC112Q8NEF3 446 aa11.16□□□□□ -0.62
TRERF1-201ENST00000340840 PHAXQ9H814 394 aaKnown RBP11.16□□□□□ -0.62
TRERF1-201ENST00000340840 BTBD11A6QL63 1104 aa11.16□□□□□ -0.62
TRERF1-201ENST00000340840 SF3A1Q15459 793 aaKnown RBP11.16□□□□□ -0.62
TRERF1-201ENST00000340840 CKAP2LQ8IYA6 745 aa11.16□□□□□ -0.62
TRERF1-201ENST00000340840 DBF4Q9UBU7 674 aaPredicted RBP11.16□□□□□ -0.62
TRERF1-201ENST00000340840 MAP2P11137 1827 aaKnown RBP11.16□□□□□ -0.62
TRERF1-201ENST00000340840 CPA1P15085 419 aa11.16□□□□□ -0.62
TRERF1-201ENST00000340840 RIC3Q7Z5B4 369 aa11.16□□□□□ -0.62
TRERF1-201ENST00000340840 RBM8AQ9Y5S9 174 aaKnown RBP11.16□□□□□ -0.62
TRERF1-201ENST00000340840 A2ML1A8K2U0 1454 aa11.16□□□□□ -0.62
TRERF1-201ENST00000340840 CBX1P83916 185 aa11.15□□□□□ -0.62
TRERF1-201ENST00000340840 AIMP1Q12904 312 aaKnown RBP11.15□□□□□ -0.62
TRERF1-201ENST00000340840 KLHL34Q8N239 644 aa11.15□□□□□ -0.62
TRERF1-201ENST00000340840 CFAP45Q9UL16 551 aa11.15□□□□□ -0.62
TRERF1-201ENST00000340840 KCNA6P17658 529 aa11.15□□□□□ -0.62
TRERF1-201ENST00000340840 PPP4R3BQ5MIZ7 849 aa11.15□□□□□ -0.62
TRERF1-201ENST00000340840 USHBP1Q8N6Y0 703 aa11.15□□□□□ -0.62
TRERF1-201ENST00000340840 TM6SF1Q9BZW5 370 aa11.15□□□□□ -0.62
TRERF1-201ENST00000340840 CHPF2Q9P2E5 772 aa11.15□□□□□ -0.62
TRERF1-201ENST00000340840 KINO60870 393 aaKnown RBP11.15□□□□□ -0.63
TRERF1-201ENST00000340840 RUFY3Q7L099 469 aa11.15□□□□□ -0.63
TRERF1-201ENST00000340840 TYRO3Q06418 890 aa11.14□□□□□ -0.63
TRERF1-201ENST00000340840 C17orf53Q8N3J3 647 aaPredicted RBP11.14□□□□□ -0.63
TRERF1-201ENST00000340840 PRDM11Q9NQV5 511 aa11.14□□□□□ -0.63
TRERF1-201ENST00000340840 TFIP11Q9UBB9 837 aaKnown RBP11.14□□□□□ -0.63
TRERF1-201ENST00000340840 CAVIN2O95810 425 aa11.14□□□□□ -0.63
TRERF1-201ENST00000340840 LSG1Q9H089 658 aaKnown RBP11.14□□□□□ -0.63
TRERF1-201ENST00000340840 SIL1Q9H173 461 aa11.14□□□□□ -0.63
TRERF1-201ENST00000340840 NPHP3Q7Z494 1330 aa11.14□□□□□ -0.63
TRERF1-201ENST00000340840 ALDH1L1O75891 902 aa11.14□□□□□ -0.63
TRERF1-201ENST00000340840 ZNF771Q7L3S4 317 aaPredicted RBP11.14□□□□□ -0.63
TRERF1-201ENST00000340840 C8orf37Q96NL8 207 aa11.14□□□□□ -0.63
TRERF1-201ENST00000340840 CCDC171Q6TFL3 1326 aa11.14□□□□□ -0.63
TRERF1-201ENST00000340840 CRB1P82279 1406 aa11.13□□□□□ -0.63
TRERF1-201ENST00000340840 NPHP1O15259 732 aa11.13□□□□□ -0.63
TRERF1-201ENST00000340840 ZNF165P49910 485 aa11.13□□□□□ -0.63
TRERF1-201ENST00000340840 RASEFQ8IZ41 740 aa11.13□□□□□ -0.63
TRERF1-201ENST00000340840 NAT10Q9H0A0 1025 aaKnown RBP11.13□□□□□ -0.63
TRERF1-201ENST00000340840 BOLA2Q9H3K6 86 aa11.13□□□□□ -0.63
TRERF1-201ENST00000340840 DACT1Q9NYF0 836 aa11.13□□□□□ -0.63
TRERF1-201ENST00000340840 MTMR6Q9Y217 621 aa11.13□□□□□ -0.63
TRERF1-201ENST00000340840 TMEM131LA2VDJ0 1609 aa11.13□□□□□ -0.63
TRERF1-201ENST00000340840 IGSF1Q8N6C5 1336 aa11.13□□□□□ -0.63
TRERF1-201ENST00000340840 ANXA1P04083 346 aa11.13□□□□□ -0.63
TRERF1-201ENST00000340840 CCDC8Q9H0W5 538 aaPredicted RBP11.13□□□□□ -0.63
TRERF1-201ENST00000340840 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.13□□□□□ -0.63
TRERF1-201ENST00000340840 HMG20BQ9P0W2 317 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms