RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 SDSP20132 328 aa9.06□□□□□ -0.96
HIPK1-201ENST00000340480 TRIM29Q14134 588 aa9.06□□□□□ -0.96
HIPK1-201ENST00000340480 NUTM1Q86Y26 1132 aa9.06□□□□□ -0.96
HIPK1-201ENST00000340480 FBXW7Q969H0 707 aa9.06□□□□□ -0.96
HIPK1-201ENST00000340480 R3HCC1Q9Y3T6 440 aaKnown RBP9.06□□□□□ -0.96
HIPK1-201ENST00000340480 CHRNA2Q15822 529 aa9.06□□□□□ -0.96
HIPK1-201ENST00000340480 ZNF790Q6PG37 636 aa9.06□□□□□ -0.96
HIPK1-201ENST00000340480 CCAR1Q8IX12 1150 aaKnown RBP9.06□□□□□ -0.96
HIPK1-201ENST00000340480 SART3Q15020 963 aaKnown RBP9.05□□□□□ -0.96
HIPK1-201ENST00000340480 SLIT1O75093 1534 aa9.05□□□□□ -0.96
HIPK1-201ENST00000340480 XAGE3Q8WTP9 111 aa9.05□□□□□ -0.96
HIPK1-201ENST00000340480 SLC52A2Q9HAB3 445 aa9.05□□□□□ -0.96
HIPK1-201ENST00000340480 ERICH2A1L162 156 aa9.05□□□□□ -0.96
HIPK1-201ENST00000340480 SIL1Q9H173 461 aa9.05□□□□□ -0.96
HIPK1-201ENST00000340480 PDE4CQ08493 712 aa9.05□□□□□ -0.96
HIPK1-201ENST00000340480 WWC2Q6AWC2 1192 aa9.05□□□□□ -0.96
HIPK1-201ENST00000340480 SKAP1Q86WV1 359 aa9.05□□□□□ -0.96
HIPK1-201ENST00000340480 SMARCC1Q92922 1105 aaPredicted RBP9.05□□□□□ -0.96
HIPK1-201ENST00000340480 U3KPZ7 1027 aaPredicted RBP9.05□□□□□ -0.96
HIPK1-201ENST00000340480 ARHGAP23Q9P227 1491 aa9.05□□□□□ -0.96
HIPK1-201ENST00000340480 VPS37CA5D8V6 355 aaPredicted RBP9.04□□□□□ -0.96
HIPK1-201ENST00000340480 RAD21O60216 631 aa9.04□□□□□ -0.96
HIPK1-201ENST00000340480 KRT24Q2M2I5 525 aa9.04□□□□□ -0.96
HIPK1-201ENST00000340480 NACAP1Q9BZK3 213 aa9.04□□□□□ -0.96
HIPK1-201ENST00000340480 APPP05067 770 aa9.04□□□□□ -0.96
HIPK1-201ENST00000340480 IFIT5Q13325 482 aaKnown RBP9.04□□□□□ -0.96
HIPK1-201ENST00000340480 IL17REQ8NFR9 667 aa9.04□□□□□ -0.96
HIPK1-201ENST00000340480 MPHOSPH8Q99549 860 aa9.04□□□□□ -0.96
HIPK1-201ENST00000340480 PDRG1Q9NUG6 133 aa9.04□□□□□ -0.96
HIPK1-201ENST00000340480 KDRP35968 1356 aa9.04□□□□□ -0.96
HIPK1-201ENST00000340480 ERVV-2B6SEH9 535 aa9.04□□□□□ -0.96
HIPK1-201ENST00000340480 PTCD1O75127 700 aaKnown RBP9.04□□□□□ -0.96
HIPK1-201ENST00000340480 IL15P40933 162 aaPredicted RBP9.04□□□□□ -0.96
HIPK1-201ENST00000340480 TSR1Q2NL82 804 aaKnown RBP9.04□□□□□ -0.96
HIPK1-201ENST00000340480 MCTP1Q6DN14 999 aa9.04□□□□□ -0.96
HIPK1-201ENST00000340480 COPS6Q7L5N1 327 aa9.04□□□□□ -0.96
HIPK1-201ENST00000340480 NCOA3Q9Y6Q9 1424 aa9.04□□□□□ -0.96
HIPK1-201ENST00000340480 TOM1O60784 492 aa9.04□□□□□ -0.96
HIPK1-201ENST00000340480 ESYT1Q9BSJ8 1104 aa9.04□□□□□ -0.96
HIPK1-201ENST00000340480 CWC27Q6UX04 472 aaKnown RBP9.04□□□□□ -0.96
HIPK1-201ENST00000340480 GOLGA6L1Q8N7Z2 621 aa9.04□□□□□ -0.96
HIPK1-201ENST00000340480 SSH2Q76I76 1423 aa9.03□□□□□ -0.96
HIPK1-201ENST00000340480 USP19O94966 1318 aa9.03□□□□□ -0.96
HIPK1-201ENST00000340480 SLAIN2Q9P270 581 aa9.03□□□□□ -0.96
HIPK1-201ENST00000340480 IFT172Q9UG01 1749 aa9.03□□□□□ -0.96
HIPK1-201ENST00000340480 ZFYP08048 801 aaPredicted RBP9.03□□□□□ -0.96
HIPK1-201ENST00000340480 IGHMBP2P38935 993 aaKnown RBP9.03□□□□□ -0.96
HIPK1-201ENST00000340480 UBE3BQ7Z3V4 1068 aa9.03□□□□□ -0.96
HIPK1-201ENST00000340480 ERBB3P21860 1342 aa9.03□□□□□ -0.96
HIPK1-201ENST00000340480 SAFBQ15424 915 aaKnown RBP eCLIP9.03□□□□□ -0.96
HIPK1-201ENST00000340480 CEP170BQ9Y4F5 1589 aaPredicted RBP9.03□□□□□ -0.96
HIPK1-201ENST00000340480 G2E3Q7L622 706 aa9.02□□□□□ -0.96
HIPK1-201ENST00000340480 PLBD2Q8NHP8 589 aa9.02□□□□□ -0.96
HIPK1-201ENST00000340480 JAKMIP1Q96N16 626 aaKnown RBP9.02□□□□□ -0.96
HIPK1-201ENST00000340480 LIMCH1Q9UPQ0 1083 aa9.02□□□□□ -0.96
HIPK1-201ENST00000340480 ANKRD18BA2A2Z9 1011 aa9.02□□□□□ -0.97
HIPK1-201ENST00000340480 CCDC73Q6ZRK6 1079 aa9.02□□□□□ -0.97
HIPK1-201ENST00000340480 SSH3Q8TE77 659 aa9.02□□□□□ -0.97
HIPK1-201ENST00000340480 METTL22Q9BUU2 404 aaPredicted RBP9.02□□□□□ -0.97
HIPK1-201ENST00000340480 NFATC2IPQ8NCF5 419 aa9.02□□□□□ -0.97
HIPK1-201ENST00000340480 TTF1Q15361 905 aaPredicted RBP9.02□□□□□ -0.97
HIPK1-201ENST00000340480 TPD52L1Q16890 204 aaPredicted RBP9.02□□□□□ -0.97
HIPK1-201ENST00000340480 ZNF396Q96N95 335 aaPredicted RBP9.02□□□□□ -0.97
HIPK1-201ENST00000340480 IFIT1P09914 478 aaKnown RBP9.02□□□□□ -0.97
HIPK1-201ENST00000340480 HOOK1Q9UJC3 728 aaKnown RBP9.02□□□□□ -0.97
HIPK1-201ENST00000340480 GIGYF1O75420 1035 aaPredicted RBP9.02□□□□□ -0.97
HIPK1-201ENST00000340480 CDKL5O76039 1030 aa9.02□□□□□ -0.97
HIPK1-201ENST00000340480 SLC3A2P08195 630 aaKnown RBP9.02□□□□□ -0.97
HIPK1-201ENST00000340480 HSPA2P54652 639 aa9.01□□□□□ -0.97
HIPK1-201ENST00000340480 KRT85P78386 507 aa9.01□□□□□ -0.97
HIPK1-201ENST00000340480 PHKG2P15735 406 aa9.01□□□□□ -0.97
HIPK1-201ENST00000340480 XBP1P17861 261 aa9.01□□□□□ -0.97
HIPK1-201ENST00000340480 METTL24Q5JXM2 366 aa9.01□□□□□ -0.97
HIPK1-201ENST00000340480 OSBPL3Q9H4L5 887 aa9.01□□□□□ -0.97
HIPK1-201ENST00000340480 UQCRFS1P1P0C7P4 283 aa9.01□□□□□ -0.97
HIPK1-201ENST00000340480 MYOM1P52179 1685 aa9.01□□□□□ -0.97
HIPK1-201ENST00000340480 COL3A1P02461 1466 aaPredicted RBP9□□□□□ -0.97
HIPK1-201ENST00000340480 IMMTQ16891 758 aaKnown RBP9□□□□□ -0.97
HIPK1-201ENST00000340480 CREBRFQ8IUR6 639 aa9□□□□□ -0.97
HIPK1-201ENST00000340480 PHAXQ9H814 394 aaKnown RBP9□□□□□ -0.97
HIPK1-201ENST00000340480 NFXL1Q6ZNB6 911 aa9□□□□□ -0.97
HIPK1-201ENST00000340480 CCDC191Q8NCU4 936 aa9□□□□□ -0.97
HIPK1-201ENST00000340480 INTS4Q96HW7 963 aaKnown RBP9□□□□□ -0.97
HIPK1-201ENST00000340480 TPM1P09493 284 aa9□□□□□ -0.97
HIPK1-201ENST00000340480 HMGN5P82970 282 aaKnown RBP9□□□□□ -0.97
HIPK1-201ENST00000340480 FOXD4L5Q5VV16 416 aaPredicted RBP9□□□□□ -0.97
HIPK1-201ENST00000340480 BICD2Q8TD16 824 aa9□□□□□ -0.97
HIPK1-201ENST00000340480 FOXD4L4Q8WXT5 416 aaPredicted RBP9□□□□□ -0.97
HIPK1-201ENST00000340480 LGR6Q9HBX8 967 aa9□□□□□ -0.97
HIPK1-201ENST00000340480 CD163L1Q9NR16 1453 aa9□□□□□ -0.97
HIPK1-201ENST00000340480 SLC39A6Q13433 755 aa9□□□□□ -0.97
HIPK1-201ENST00000340480 JMYQ8N9B5 988 aa9□□□□□ -0.97
HIPK1-201ENST00000340480 TRMT112Q9UI30 125 aaKnown RBP9□□□□□ -0.97
HIPK1-201ENST00000340480 ANXA1P04083 346 aa9□□□□□ -0.97
HIPK1-201ENST00000340480 BOLA2Q9H3K6 86 aa9□□□□□ -0.97
HIPK1-201ENST00000340480 FBXO3Q9UK99 471 aa9□□□□□ -0.97
HIPK1-201ENST00000340480 CASTP20810 708 aaKnown RBP8.99□□□□□ -0.97
HIPK1-201ENST00000340480 ZBTB3Q9H5J0 574 aa8.99□□□□□ -0.97
HIPK1-201ENST00000340480 GOLGA6L19H0YKK7 550 aa8.99□□□□□ -0.97
HIPK1-201ENST00000340480 WDHD1O75717 1129 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms