RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 SNRPA1P09661 255 aaKnown RBP28.25■■■□□ 2.11
CLPTM1-201ENST00000337392 CHAMP1Q96JM3 812 aa28.25■■■□□ 2.11
CLPTM1-201ENST00000337392 NEURL1BA8MQ27 555 aa28.25■■■□□ 2.11
CLPTM1-201ENST00000337392 RAB11FIP3O75154 756 aa28.25■■■□□ 2.11
CLPTM1-201ENST00000337392 DDX58O95786 925 aaKnown RBP28.25■■■□□ 2.11
CLPTM1-201ENST00000337392 UPF3BQ9BZI7 483 aaKnown RBP28.25■■■□□ 2.11
CLPTM1-201ENST00000337392 CCDC8Q9H0W5 538 aaPredicted RBP28.25■■■□□ 2.11
CLPTM1-201ENST00000337392 WDR17Q8IZU2 1322 aa28.25■■■□□ 2.11
CLPTM1-201ENST00000337392 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.24■■■□□ 2.11
CLPTM1-201ENST00000337392 CPDO75976 1380 aa28.24■■■□□ 2.11
CLPTM1-201ENST00000337392 SOS2Q07890 1332 aaPredicted RBP28.24■■■□□ 2.11
CLPTM1-201ENST00000337392 ANKRD13DQ6ZTN6 518 aa28.24■■■□□ 2.11
CLPTM1-201ENST00000337392 ZCRB1Q8TBF4 217 aaKnown RBP28.24■■■□□ 2.11
CLPTM1-201ENST00000337392 NEK4P51957 841 aa28.23■■■□□ 2.11
CLPTM1-201ENST00000337392 FMNL2Q96PY5 1086 aa28.23■■■□□ 2.11
CLPTM1-201ENST00000337392 SASH1O94885 1247 aa28.23■■■□□ 2.11
CLPTM1-201ENST00000337392 KAT6BQ8WYB5 2073 aa28.23■■■□□ 2.11
CLPTM1-201ENST00000337392 DTNBO60941 627 aa28.22■■■□□ 2.11
CLPTM1-201ENST00000337392 CWC27Q6UX04 472 aaKnown RBP28.22■■■□□ 2.11
CLPTM1-201ENST00000337392 CHMP4AQ9BY43 222 aa28.22■■■□□ 2.11
CLPTM1-201ENST00000337392 NBPF26B4DH59 902 aa28.22■■■□□ 2.11
CLPTM1-201ENST00000337392 A1BGP04217 495 aa28.22■■■□□ 2.11
CLPTM1-201ENST00000337392 GCKRQ14397 625 aa28.22■■■□□ 2.11
CLPTM1-201ENST00000337392 NBPF14Q5TI25 921 aa28.22■■■□□ 2.11
CLPTM1-201ENST00000337392 NBPF10Q6P3W6 841 aaKnown RBP28.22■■■□□ 2.11
CLPTM1-201ENST00000337392 AACSQ86V21 672 aa28.22■■■□□ 2.11
CLPTM1-201ENST00000337392 NBPF15Q8N660 670 aa28.22■■■□□ 2.11
CLPTM1-201ENST00000337392 UBE3BQ7Z3V4 1068 aa28.21■■■□□ 2.11
CLPTM1-201ENST00000337392 ZNF330Q9Y3S2 320 aaPredicted RBP28.21■■■□□ 2.11
CLPTM1-201ENST00000337392 MTX1Q13505 466 aa28.2■■■□□ 2.1
CLPTM1-201ENST00000337392 FOXD4L5Q5VV16 416 aaPredicted RBP28.2■■■□□ 2.1
CLPTM1-201ENST00000337392 TTLL7Q6ZT98 887 aa28.2■■■□□ 2.1
CLPTM1-201ENST00000337392 FOXD4L4Q8WXT5 416 aaPredicted RBP28.2■■■□□ 2.1
CLPTM1-201ENST00000337392 LARP6Q9BRS8 491 aaKnown RBP28.2■■■□□ 2.1
CLPTM1-201ENST00000337392 EVA1CP58658 441 aa28.2■■■□□ 2.1
CLPTM1-201ENST00000337392 RAB3GAP1Q15042 981 aa28.2■■■□□ 2.1
CLPTM1-201ENST00000337392 EAF2Q96CJ1 260 aaPredicted RBP28.2■■■□□ 2.1
CLPTM1-201ENST00000337392 CLASRPQ8N2M8 674 aaKnown RBP28.19■■■□□ 2.1
CLPTM1-201ENST00000337392 CCDC9Q9Y3X0 531 aaKnown RBP28.19■■■□□ 2.1
CLPTM1-201ENST00000337392 NDUFB9Q9Y6M9 179 aa28.19■■■□□ 2.1
CLPTM1-201ENST00000337392 COL5A2P05997 1499 aaPredicted RBP28.19■■■□□ 2.1
CLPTM1-201ENST00000337392 NEXNQ0ZGT2 675 aa28.19■■■□□ 2.1
CLPTM1-201ENST00000337392 METTL22Q9BUU2 404 aaPredicted RBP28.19■■■□□ 2.1
CLPTM1-201ENST00000337392 TRAK2O60296 914 aa28.18■■■□□ 2.1
CLPTM1-201ENST00000337392 IFIT2P09913 472 aaKnown RBP28.16■■■□□ 2.1
CLPTM1-201ENST00000337392 ZBTB3Q9H5J0 574 aa28.16■■■□□ 2.1
CLPTM1-201ENST00000337392 ST18O60284 1047 aa28.15■■■□□ 2.1
CLPTM1-201ENST00000337392 IL2RBP14784 551 aa28.15■■■□□ 2.1
CLPTM1-201ENST00000337392 EDC3Q96F86 508 aaKnown RBP28.15■■■□□ 2.1
CLPTM1-201ENST00000337392 CPA1P15085 419 aa28.14■■■□□ 2.09
CLPTM1-201ENST00000337392 PCDH11XQ9BZA7 1347 aa28.14■■■□□ 2.09
CLPTM1-201ENST00000337392 PCDH11YQ9BZA8 1340 aa28.14■■■□□ 2.09
CLPTM1-201ENST00000337392 PKD1L3Q7Z443 1732 aa28.14■■■□□ 2.09
CLPTM1-201ENST00000337392 A0A087WZG4 1122 aa28.13■■■□□ 2.09
CLPTM1-201ENST00000337392 G3BP1Q13283 466 aaKnown RBP eCLIP28.13■■■□□ 2.09
CLPTM1-201ENST00000337392 CHGBP05060 677 aa28.13■■■□□ 2.09
CLPTM1-201ENST00000337392 UTYO14607 1347 aa28.13■■■□□ 2.09
CLPTM1-201ENST00000337392 BOLA2Q9H3K6 86 aa28.12■■■□□ 2.09
CLPTM1-201ENST00000337392 BTG4Q9NY30 223 aa28.12■■■□□ 2.09
CLPTM1-201ENST00000337392 HSP90AB4PQ58FF6 505 aa28.12■■■□□ 2.09
CLPTM1-201ENST00000337392 CNTROBQ8N137 903 aa28.12■■■□□ 2.09
CLPTM1-201ENST00000337392 CHMP3Q9Y3E7 222 aa28.11■■■□□ 2.09
CLPTM1-201ENST00000337392 MRC1P22897 1456 aa28.11■■■□□ 2.09
CLPTM1-201ENST00000337392 RASEFQ8IZ41 740 aa28.11■■■□□ 2.09
CLPTM1-201ENST00000337392 ECHDC1Q9NTX5 307 aa28.11■■■□□ 2.09
CLPTM1-201ENST00000337392 SGSM2O43147 1006 aa28.1■■■□□ 2.09
CLPTM1-201ENST00000337392 TMX3Q96JJ7 454 aa28.1■■■□□ 2.09
CLPTM1-201ENST00000337392 AOX1Q06278 1338 aa28.1■■■□□ 2.09
CLPTM1-201ENST00000337392 GLI3P10071 1580 aa28.09■■■□□ 2.09
CLPTM1-201ENST00000337392 PTH1RQ03431 593 aa28.09■■■□□ 2.09
CLPTM1-201ENST00000337392 COL9A3Q14050 684 aaPredicted RBP28.09■■■□□ 2.09
CLPTM1-201ENST00000337392 GLRX3O76003 335 aaKnown RBP28.08■■■□□ 2.09
CLPTM1-201ENST00000337392 FAM227BQ96M60 508 aa28.08■■■□□ 2.09
CLPTM1-201ENST00000337392 CARD10Q9BWT7 1032 aa28.08■■■□□ 2.09
CLPTM1-201ENST00000337392 ASAP1Q9ULH1 1129 aa28.08■■■□□ 2.09
CLPTM1-201ENST00000337392 CIZ1Q9ULV3 898 aaPredicted RBP28.08■■■□□ 2.09
CLPTM1-201ENST00000337392 LSG1Q9H089 658 aaKnown RBP28.07■■■□□ 2.08
CLPTM1-201ENST00000337392 TFCP2Q12800 502 aa28.05■■■□□ 2.08
CLPTM1-201ENST00000337392 FOXD4L6Q3SYB3 417 aaPredicted RBP28.05■■■□□ 2.08
CLPTM1-201ENST00000337392 FOXD4L3Q6VB84 417 aaPredicted RBP28.05■■■□□ 2.08
CLPTM1-201ENST00000337392 CCDC85AQ96PX6 553 aaPredicted RBP28.05■■■□□ 2.08
CLPTM1-201ENST00000337392 DIAPH3Q9NSV4 1193 aa28.05■■■□□ 2.08
CLPTM1-201ENST00000337392 PTPN12Q05209 780 aaKnown RBP28.05■■■□□ 2.08
CLPTM1-201ENST00000337392 LMBR1LQ6UX01 489 aa28.05■■■□□ 2.08
CLPTM1-201ENST00000337392 ZDHHC9Q9Y397 364 aa28.05■■■□□ 2.08
CLPTM1-201ENST00000337392 MCCP23508 829 aa28.05■■■□□ 2.08
CLPTM1-201ENST00000337392 TTC41PQ6P2S7 1318 aa28.04■■■□□ 2.08
CLPTM1-201ENST00000337392 HSPA4P34932 840 aa28.04■■■□□ 2.08
CLPTM1-201ENST00000337392 PLBD2Q8NHP8 589 aa28.04■■■□□ 2.08
CLPTM1-201ENST00000337392 AFDNP55196 1824 aaKnown RBP28.03■■■□□ 2.08
CLPTM1-201ENST00000337392 RFX5P48382 616 aaPredicted RBP28.03■■■□□ 2.08
CLPTM1-201ENST00000337392 BAG4O95429 457 aaKnown RBP28.03■■■□□ 2.08
CLPTM1-201ENST00000337392 MCTP1Q6DN14 999 aa28.03■■■□□ 2.08
CLPTM1-201ENST00000337392 SNX14Q9Y5W7 946 aa28.03■■■□□ 2.08
CLPTM1-201ENST00000337392 USP42Q9H9J4 1324 aaKnown RBP28.02■■■□□ 2.08
CLPTM1-201ENST00000337392 ERC1Q8IUD2 1116 aa28.02■■■□□ 2.08
CLPTM1-201ENST00000337392 ZNF594Q96JF6 807 aaPredicted RBP28.02■■■□□ 2.08
CLPTM1-201ENST00000337392 RAD50Q92878 1312 aa28.02■■■□□ 2.08
CLPTM1-201ENST00000337392 DDX11L8A8MPP1 907 aa28.02■■■□□ 2.08
CLPTM1-201ENST00000337392 EIF5BO60841 1220 aaKnown RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms