RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 DDX41Q9UJV9 622 aaKnown RBP20.52■□□□□ 0.88
PRKCD-201ENST00000330452 NBPF6Q5VWK0 638 aa20.52■□□□□ 0.88
PRKCD-201ENST00000330452 CLEC17AQ6ZS10 378 aa20.52■□□□□ 0.88
PRKCD-201ENST00000330452 IL17REQ8NFR9 667 aa20.52■□□□□ 0.88
PRKCD-201ENST00000330452 NBPF4Q96M43 638 aa20.52■□□□□ 0.88
PRKCD-201ENST00000330452 CHD2O14647 1828 aaKnown RBP20.52■□□□□ 0.88
PRKCD-201ENST00000330452 PNMA6EA0A0J9YXQ4 647 aa20.51■□□□□ 0.87
PRKCD-201ENST00000330452 NOP2P46087 812 aaKnown RBP20.51■□□□□ 0.87
PRKCD-201ENST00000330452 AK9Q5TCS8 1911 aa20.51■□□□□ 0.87
PRKCD-201ENST00000330452 BAG4O95429 457 aaKnown RBP20.51■□□□□ 0.87
PRKCD-201ENST00000330452 PKP1Q13835 747 aa20.51■□□□□ 0.87
PRKCD-201ENST00000330452 CCDC30Q5VVM6 783 aa20.51■□□□□ 0.87
PRKCD-201ENST00000330452 CTIFO43310 598 aaKnown RBP20.5■□□□□ 0.87
PRKCD-201ENST00000330452 ERC2O15083 957 aa20.5■□□□□ 0.87
PRKCD-201ENST00000330452 RIOK3O14730 519 aaKnown RBP20.5■□□□□ 0.87
PRKCD-201ENST00000330452 REC8O95072 547 aa20.5■□□□□ 0.87
PRKCD-201ENST00000330452 BANK1Q8NDB2 785 aa20.5■□□□□ 0.87
PRKCD-201ENST00000330452 OSBPL3Q9H4L5 887 aa20.5■□□□□ 0.87
PRKCD-201ENST00000330452 RSPH14Q9UHP6 348 aa20.5■□□□□ 0.87
PRKCD-201ENST00000330452 MORC2Q9Y6X9 1032 aaPredicted RBP20.5■□□□□ 0.87
PRKCD-201ENST00000330452 ZGPATQ8N5A5 531 aaKnown RBP20.49■□□□□ 0.87
PRKCD-201ENST00000330452 HTATSF1O43719 755 aaKnown RBP20.48■□□□□ 0.87
PRKCD-201ENST00000330452 GTF2A1P52655 376 aaPredicted RBP20.48■□□□□ 0.87
PRKCD-201ENST00000330452 C17orf53Q8N3J3 647 aaPredicted RBP20.48■□□□□ 0.87
PRKCD-201ENST00000330452 ADGRL3Q9HAR2 1447 aa20.48■□□□□ 0.87
PRKCD-201ENST00000330452 MYCBPQ99417 103 aaPredicted RBP20.48■□□□□ 0.87
PRKCD-201ENST00000330452 AXIN2Q9Y2T1 843 aa20.48■□□□□ 0.87
PRKCD-201ENST00000330452 ANKARQ7Z5J8 1434 aa20.47■□□□□ 0.87
PRKCD-201ENST00000330452 ST18O60284 1047 aa20.47■□□□□ 0.87
PRKCD-201ENST00000330452 LRRCC1Q9C099 1032 aa20.47■□□□□ 0.87
PRKCD-201ENST00000330452 SPTLC3Q9NUV7 552 aa20.47■□□□□ 0.87
PRKCD-201ENST00000330452 LRRFIP2Q9Y608 721 aaKnown RBP20.47■□□□□ 0.87
PRKCD-201ENST00000330452 GNAI3P08754 354 aa20.47■□□□□ 0.87
PRKCD-201ENST00000330452 CT47A1Q5JQC4 288 aaPredicted RBP20.47■□□□□ 0.87
PRKCD-201ENST00000330452 ATP8B2P98198 1209 aa20.46■□□□□ 0.87
PRKCD-201ENST00000330452 RAD51AP2Q09MP3 1159 aa20.46■□□□□ 0.87
PRKCD-201ENST00000330452 SALL3Q9BXA9 1300 aa20.46■□□□□ 0.87
PRKCD-201ENST00000330452 GCP02774 474 aa20.46■□□□□ 0.87
PRKCD-201ENST00000330452 MCTP1Q6DN14 999 aa20.46■□□□□ 0.87
PRKCD-201ENST00000330452 KRT28Q7Z3Y7 464 aa20.46■□□□□ 0.87
PRKCD-201ENST00000330452 MAP3K5Q99683 1374 aa20.45■□□□□ 0.86
PRKCD-201ENST00000330452 DHX16O60231 1041 aaKnown RBP20.45■□□□□ 0.86
PRKCD-201ENST00000330452 TAF7Q15545 349 aaPredicted RBP20.45■□□□□ 0.86
PRKCD-201ENST00000330452 NCAPGQ9BPX3 1015 aa20.45■□□□□ 0.86
PRKCD-201ENST00000330452 MX1P20591 662 aa20.45■□□□□ 0.86
PRKCD-201ENST00000330452 LGR6Q9HBX8 967 aa20.45■□□□□ 0.86
PRKCD-201ENST00000330452 DIAPH3Q9NSV4 1193 aa20.45■□□□□ 0.86
PRKCD-201ENST00000330452 CYP2E1P05181 493 aaPredicted RBP20.44■□□□□ 0.86
PRKCD-201ENST00000330452 HNRNPH2P55795 449 aaKnown RBP20.44■□□□□ 0.86
PRKCD-201ENST00000330452 NUCB2P80303 420 aa20.44■□□□□ 0.86
PRKCD-201ENST00000330452 NCBP1Q09161 790 aaKnown RBP20.44■□□□□ 0.86
PRKCD-201ENST00000330452 PHAXQ9H814 394 aaKnown RBP20.44■□□□□ 0.86
PRKCD-201ENST00000330452 NWD1Q149M9 1564 aa20.44■□□□□ 0.86
PRKCD-201ENST00000330452 RILPL2Q969X0 211 aa20.44■□□□□ 0.86
PRKCD-201ENST00000330452 TMX1Q9H3N1 280 aa20.44■□□□□ 0.86
PRKCD-201ENST00000330452 USP44Q9H0E7 712 aa20.43■□□□□ 0.86
PRKCD-201ENST00000330452 LRSAM1Q6UWE0 723 aa20.43■□□□□ 0.86
PRKCD-201ENST00000330452 EGFL6Q8IUX8 553 aa20.43■□□□□ 0.86
PRKCD-201ENST00000330452 TMEM94Q12767 1356 aa20.43■□□□□ 0.86
PRKCD-201ENST00000330452 HDGFL1Q5TGJ6 251 aa20.42■□□□□ 0.86
PRKCD-201ENST00000330452 ESYT1Q9BSJ8 1104 aa20.42■□□□□ 0.86
PRKCD-201ENST00000330452 NEK4P51957 841 aa20.42■□□□□ 0.86
PRKCD-201ENST00000330452 ZNF142P52746 1687 aaPredicted RBP20.42■□□□□ 0.86
PRKCD-201ENST00000330452 CHRNA2Q15822 529 aa20.42■□□□□ 0.86
PRKCD-201ENST00000330452 MPRIPQ6WCQ1 1025 aa20.42■□□□□ 0.86
PRKCD-201ENST00000330452 MARF1Q9Y4F3 1742 aaKnown RBP20.42■□□□□ 0.86
PRKCD-201ENST00000330452 KCNQ3O43525 872 aa20.41■□□□□ 0.86
PRKCD-201ENST00000330452 UNC5CLQ8IV45 518 aa20.41■□□□□ 0.86
PRKCD-201ENST00000330452 IL1RAPL2Q9NP60 686 aa20.41■□□□□ 0.86
PRKCD-201ENST00000330452 LMBRD1Q9NUN5 540 aa20.41■□□□□ 0.86
PRKCD-201ENST00000330452 LRRC37A3O60309 1634 aa20.41■□□□□ 0.86
PRKCD-201ENST00000330452 KRT222Q8N1A0 295 aa20.41■□□□□ 0.86
PRKCD-201ENST00000330452 MPNDQ8N594 471 aa20.41■□□□□ 0.86
PRKCD-201ENST00000330452 CHAMP1Q96JM3 812 aa20.41■□□□□ 0.86
PRKCD-201ENST00000330452 RBM27Q9P2N5 1060 aaKnown RBP20.41■□□□□ 0.86
PRKCD-201ENST00000330452 EIF2S2P20042 333 aaKnown RBP20.4■□□□□ 0.86
PRKCD-201ENST00000330452 KIF18AQ8NI77 898 aa20.4■□□□□ 0.86
PRKCD-201ENST00000330452 IP6K1Q92551 441 aa20.4■□□□□ 0.86
PRKCD-201ENST00000330452 CWC22Q9HCG8 908 aaKnown RBP20.4■□□□□ 0.86
PRKCD-201ENST00000330452 PALD1Q9ULE6 856 aa20.4■□□□□ 0.86
PRKCD-201ENST00000330452 ZDHHC9Q9Y397 364 aa20.4■□□□□ 0.86
PRKCD-201ENST00000330452 FAM208AQ9UK61 1670 aaKnown RBP20.4■□□□□ 0.86
PRKCD-201ENST00000330452 UBTFL1P0CB47 393 aaPredicted RBP20.4■□□□□ 0.86
PRKCD-201ENST00000330452 ATF3P18847 181 aa20.4■□□□□ 0.86
PRKCD-201ENST00000330452 RNF214Q8ND24 703 aa20.4■□□□□ 0.86
PRKCD-201ENST00000330452 PHF14O94880 888 aa20.4■□□□□ 0.86
PRKCD-201ENST00000330452 ICE2Q659A1 982 aa20.4■□□□□ 0.86
PRKCD-201ENST00000330452 C19orf44Q9H6X5 657 aa20.4■□□□□ 0.86
PRKCD-201ENST00000330452 CEP83Q9Y592 693 aa20.4■□□□□ 0.86
PRKCD-201ENST00000330452 ANXA1P04083 346 aa20.39■□□□□ 0.85
PRKCD-201ENST00000330452 CHMLP26374 656 aa20.39■□□□□ 0.85
PRKCD-201ENST00000330452 CHAF1AQ13111 956 aaPredicted RBP20.39■□□□□ 0.85
PRKCD-201ENST00000330452 ANO2Q9NQ90 1003 aa20.39■□□□□ 0.85
PRKCD-201ENST00000330452 FOXD4L5Q5VV16 416 aaPredicted RBP20.39■□□□□ 0.85
PRKCD-201ENST00000330452 FOXD4L4Q8WXT5 416 aaPredicted RBP20.39■□□□□ 0.85
PRKCD-201ENST00000330452 RASSF4Q9H2L5 321 aa20.39■□□□□ 0.85
PRKCD-201ENST00000330452 NOL8Q76FK4 1167 aaKnown RBP20.38■□□□□ 0.85
PRKCD-201ENST00000330452 NUTM1Q86Y26 1132 aa20.38■□□□□ 0.85
PRKCD-201ENST00000330452 TTC12Q9H892 705 aaPredicted RBP20.38■□□□□ 0.85
PRKCD-201ENST00000330452 CREBRFQ8IUR6 639 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms