RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 USP48Q86UV5 1035 aa18.93■□□□□ 0.62
SMAD3-201ENST00000327367 NBPF11Q86T75 865 aa18.93■□□□□ 0.62
SMAD3-201ENST00000327367 SH2B1Q9NRF2 756 aaPredicted RBP18.93■□□□□ 0.62
SMAD3-201ENST00000327367 TMCO4Q5TGY1 634 aa18.93■□□□□ 0.62
SMAD3-201ENST00000327367 TRMT1LQ7Z2T5 733 aaKnown RBP18.93■□□□□ 0.62
SMAD3-201ENST00000327367 CPSF2Q9P2I0 782 aaKnown RBP18.93■□□□□ 0.62
SMAD3-201ENST00000327367 DNAJC25Q9H1X3 360 aa18.93■□□□□ 0.62
SMAD3-201ENST00000327367 OGFRQ9NZT2 677 aa18.93■□□□□ 0.62
SMAD3-201ENST00000327367 LRP2BPQ9P2M1 347 aa18.93■□□□□ 0.62
SMAD3-201ENST00000327367 TCERG1LQ5VWI1 586 aa18.92■□□□□ 0.62
SMAD3-201ENST00000327367 SYT10Q6XYQ8 523 aa18.92■□□□□ 0.62
SMAD3-201ENST00000327367 IGHDP01880 384 aa18.92■□□□□ 0.62
SMAD3-201ENST00000327367 AOPEPQ8N6M6 819 aa18.92■□□□□ 0.62
SMAD3-201ENST00000327367 A0A1B0GUL7 405 aa18.92■□□□□ 0.62
SMAD3-201ENST00000327367 NSRP1Q9H0G5 558 aaKnown RBP18.92■□□□□ 0.62
SMAD3-201ENST00000327367 CCDC8Q9H0W5 538 aaPredicted RBP18.92■□□□□ 0.62
SMAD3-201ENST00000327367 MPHOSPH10O00566 681 aaKnown RBP18.92■□□□□ 0.62
SMAD3-201ENST00000327367 CCDC155Q8N6L0 562 aa18.92■□□□□ 0.62
SMAD3-201ENST00000327367 GOLGA8BA8MQT2 603 aa18.91■□□□□ 0.62
SMAD3-201ENST00000327367 SARNPP82979 210 aaKnown RBP18.91■□□□□ 0.62
SMAD3-201ENST00000327367 RPAP2Q8IXW5 612 aaPredicted RBP18.91■□□□□ 0.62
SMAD3-201ENST00000327367 ABTB2Q8N961 1025 aa18.91■□□□□ 0.62
SMAD3-201ENST00000327367 PLEKHH1Q9ULM0 1364 aa18.91■□□□□ 0.62
SMAD3-201ENST00000327367 GOLGA1Q92805 767 aa18.91■□□□□ 0.62
SMAD3-201ENST00000327367 NECAB1Q8N987 351 aa18.91■□□□□ 0.62
SMAD3-201ENST00000327367 RSRC1Q96IZ7 334 aaKnown RBP18.91■□□□□ 0.62
SMAD3-201ENST00000327367 SEPT6Q14141 434 aa18.91■□□□□ 0.62
SMAD3-201ENST00000327367 CCDC40Q4G0X9 1142 aa18.91■□□□□ 0.62
SMAD3-201ENST00000327367 MPHOSPH8Q99549 860 aa18.9■□□□□ 0.62
SMAD3-201ENST00000327367 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.9■□□□□ 0.62
SMAD3-201ENST00000327367 PLEKHO1Q53GL0 409 aaPredicted RBP18.9■□□□□ 0.62
SMAD3-201ENST00000327367 U3KPZ7 1027 aaPredicted RBP18.9■□□□□ 0.62
SMAD3-201ENST00000327367 ANKS4BQ8N8V4 417 aa18.9■□□□□ 0.62
SMAD3-201ENST00000327367 SSRP1Q08945 709 aaKnown RBP18.9■□□□□ 0.62
SMAD3-201ENST00000327367 CFAP57Q96MR6 1250 aa18.9■□□□□ 0.62
SMAD3-201ENST00000327367 ANKRD18BA2A2Z9 1011 aa18.89■□□□□ 0.62
SMAD3-201ENST00000327367 ZSCAN29Q8IWY8 852 aaPredicted RBP18.89■□□□□ 0.62
SMAD3-201ENST00000327367 N4BP3O15049 544 aa18.89■□□□□ 0.61
SMAD3-201ENST00000327367 SYT1P21579 422 aa18.89■□□□□ 0.61
SMAD3-201ENST00000327367 RRS1Q15050 365 aaKnown RBP18.89■□□□□ 0.61
SMAD3-201ENST00000327367 TBC1D32Q96NH3 1257 aa18.89■□□□□ 0.61
SMAD3-201ENST00000327367 OPA1O60313 960 aa18.89■□□□□ 0.61
SMAD3-201ENST00000327367 CKAP4Q07065 602 aaKnown RBP18.89■□□□□ 0.61
SMAD3-201ENST00000327367 KIAA0753Q2KHM9 967 aa18.89■□□□□ 0.61
SMAD3-201ENST00000327367 ABCF2Q9UG63 623 aa18.89■□□□□ 0.61
SMAD3-201ENST00000327367 KIF5BP33176 963 aa18.89■□□□□ 0.61
SMAD3-201ENST00000327367 WDR66Q8TBY9 1149 aa18.89■□□□□ 0.61
SMAD3-201ENST00000327367 IFT81Q8WYA0 676 aa18.89■□□□□ 0.61
SMAD3-201ENST00000327367 COMMD10Q9Y6G5 202 aa18.89■□□□□ 0.61
SMAD3-201ENST00000327367 LZTFL1Q9NQ48 299 aa18.88■□□□□ 0.61
SMAD3-201ENST00000327367 PRC1O43663 620 aa18.88■□□□□ 0.61
SMAD3-201ENST00000327367 CLNS1AP54105 237 aaKnown RBP18.88■□□□□ 0.61
SMAD3-201ENST00000327367 CPLX4Q7Z7G2 160 aa18.88■□□□□ 0.61
SMAD3-201ENST00000327367 AFMP43652 599 aa18.88■□□□□ 0.61
SMAD3-201ENST00000327367 F6X3S4 739 aa18.88■□□□□ 0.61
SMAD3-201ENST00000327367 RGS22Q8NE09 1264 aa18.88■□□□□ 0.61
SMAD3-201ENST00000327367 RARSP54136 660 aaKnown RBP18.87■□□□□ 0.61
SMAD3-201ENST00000327367 CHMP4BP1P59074 171 aa18.87■□□□□ 0.61
SMAD3-201ENST00000327367 SSH1Q8WYL5 1049 aa18.87■□□□□ 0.61
SMAD3-201ENST00000327367 CEP126Q9P2H0 1117 aa18.87■□□□□ 0.61
SMAD3-201ENST00000327367 SLC12A7Q9Y666 1083 aa18.87■□□□□ 0.61
SMAD3-201ENST00000327367 GOLGA8AA7E2F4 631 aa18.87■□□□□ 0.61
SMAD3-201ENST00000327367 SF3A3Q12874 501 aaKnown RBP eCLIP18.87■□□□□ 0.611e-10■■■■■ 34.8
SMAD3-201ENST00000327367 SEC63Q9UGP8 760 aaKnown RBP18.87■□□□□ 0.61
SMAD3-201ENST00000327367 CTAGE9A4FU28 777 aa18.86■□□□□ 0.61
SMAD3-201ENST00000327367 NLRP5P59047 1200 aa18.86■□□□□ 0.61
SMAD3-201ENST00000327367 ZBTB16Q05516 673 aa18.86■□□□□ 0.61
SMAD3-201ENST00000327367 CCDC129Q6ZRS4 1044 aa18.86■□□□□ 0.61
SMAD3-201ENST00000327367 C17orf53Q8N3J3 647 aaPredicted RBP18.86■□□□□ 0.61
SMAD3-201ENST00000327367 KIF1BPQ96EK5 621 aa18.86■□□□□ 0.61
SMAD3-201ENST00000327367 IKBKGQ9Y6K9 419 aa18.86■□□□□ 0.61
SMAD3-201ENST00000327367 PDIA4P13667 645 aaKnown RBP18.86■□□□□ 0.61
SMAD3-201ENST00000327367 IDEP14735 1019 aa18.86■□□□□ 0.61
SMAD3-201ENST00000327367 FERP16591 822 aa18.86■□□□□ 0.61
SMAD3-201ENST00000327367 WDR97A6NE52 1622 aa18.86■□□□□ 0.61
SMAD3-201ENST00000327367 FGFR1OPO95684 399 aaKnown RBP18.86■□□□□ 0.61
SMAD3-201ENST00000327367 TRIM21P19474 475 aaKnown RBP18.86■□□□□ 0.61
SMAD3-201ENST00000327367 KRT13P13646 458 aa18.86■□□□□ 0.61
SMAD3-201ENST00000327367 TMX3Q96JJ7 454 aa18.86■□□□□ 0.61
SMAD3-201ENST00000327367 RRBP1Q9P2E9 1410 aaKnown RBP18.86■□□□□ 0.61
SMAD3-201ENST00000327367 TMEM110-MUSTN1A8MSY1 372 aa18.85■□□□□ 0.61
SMAD3-201ENST00000327367 AKR1B10O60218 316 aa18.85■□□□□ 0.61
SMAD3-201ENST00000327367 GLRX3O76003 335 aaKnown RBP18.85■□□□□ 0.61
SMAD3-201ENST00000327367 CABP4P57796 275 aa18.85■□□□□ 0.61
SMAD3-201ENST00000327367 FLIIQ13045 1269 aa18.85■□□□□ 0.61
SMAD3-201ENST00000327367 MROH2BQ7Z745 1585 aa18.85■□□□□ 0.61
SMAD3-201ENST00000327367 HGSO14964 777 aaPredicted RBP18.85■□□□□ 0.61
SMAD3-201ENST00000327367 ZSCAN22P10073 491 aaPredicted RBP18.85■□□□□ 0.61
SMAD3-201ENST00000327367 BTBD11A6QL63 1104 aa18.85■□□□□ 0.61
SMAD3-201ENST00000327367 RANBP6O60518 1105 aaKnown RBP18.85■□□□□ 0.61
SMAD3-201ENST00000327367 MCM10Q7L590 875 aa18.85■□□□□ 0.61
SMAD3-201ENST00000327367 SLC4A8Q2Y0W8 1093 aa18.84■□□□□ 0.61
SMAD3-201ENST00000327367 TLDC2A0PJX2 215 aa18.84■□□□□ 0.61
SMAD3-201ENST00000327367 MIPOL1Q8TD10 442 aa18.84■□□□□ 0.61
SMAD3-201ENST00000327367 TRIM47Q96LD4 638 aa18.84■□□□□ 0.61
SMAD3-201ENST00000327367 ZNF569Q5MCW4 686 aa18.84■□□□□ 0.61
SMAD3-201ENST00000327367 FGD6Q6ZV73 1430 aa18.84■□□□□ 0.61
SMAD3-201ENST00000327367 PSMC4P43686 418 aa18.84■□□□□ 0.61
SMAD3-201ENST00000327367 RRAGBQ5VZM2 374 aa18.84■□□□□ 0.61
SMAD3-201ENST00000327367 PRAM1Q96QH2 718 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms