RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 BICC1Q9H694 974 aaKnown RBP15.89■□□□□ 0.13
LIN28A-202ENST00000326279 ANKRD44Q8N8A2 993 aa15.88■□□□□ 0.13
LIN28A-202ENST00000326279 DDX49Q9Y6V7 483 aaKnown RBP15.88■□□□□ 0.13
LIN28A-202ENST00000326279 ANKIB1Q9P2G1 1089 aa15.88■□□□□ 0.13
LIN28A-202ENST00000326279 IGHMBP2P38935 993 aaKnown RBP15.88■□□□□ 0.13
LIN28A-202ENST00000326279 KIF1BPQ96EK5 621 aa15.88■□□□□ 0.13
LIN28A-202ENST00000326279 SETDB2Q96T68 719 aa15.88■□□□□ 0.13
LIN28A-202ENST00000326279 LOC102724428A0A0B4J2F2 783 aa15.87■□□□□ 0.13
LIN28A-202ENST00000326279 SIK1P57059 783 aa15.87■□□□□ 0.13
LIN28A-202ENST00000326279 CEP85Q6P2H3 762 aa15.87■□□□□ 0.13
LIN28A-202ENST00000326279 ZNF622Q969S3 477 aaKnown RBP eCLIP15.87■□□□□ 0.13
LIN28A-202ENST00000326279 LARP6Q9BRS8 491 aaKnown RBP15.87■□□□□ 0.13
LIN28A-202ENST00000326279 PPLO60437 1756 aa15.87■□□□□ 0.13
LIN28A-202ENST00000326279 SLC4A8Q2Y0W8 1093 aa15.87■□□□□ 0.13
LIN28A-202ENST00000326279 CCDC158Q5M9N0 1113 aa15.87■□□□□ 0.13
LIN28A-202ENST00000326279 TRPC5Q9UL62 973 aaPredicted RBP15.87■□□□□ 0.13
LIN28A-202ENST00000326279 SMC5Q8IY18 1101 aa15.87■□□□□ 0.13
LIN28A-202ENST00000326279 PTMAP06454 111 aaKnown RBP15.86■□□□□ 0.13
LIN28A-202ENST00000326279 SMARCC1Q92922 1105 aaPredicted RBP15.86■□□□□ 0.13
LIN28A-202ENST00000326279 TBC1D2Q9BYX2 928 aa15.86■□□□□ 0.13
LIN28A-202ENST00000326279 MYO3AQ8NEV4 1616 aa15.86■□□□□ 0.13
LIN28A-202ENST00000326279 TECPR2O15040 1411 aa15.86■□□□□ 0.13
LIN28A-202ENST00000326279 GSE1Q14687 1217 aa15.86■□□□□ 0.13
LIN28A-202ENST00000326279 TIMM10P62072 90 aa15.85■□□□□ 0.13
LIN28A-202ENST00000326279 RHPN1Q8TCX5 695 aa15.85■□□□□ 0.13
LIN28A-202ENST00000326279 IRS4O14654 1257 aaPredicted RBP15.85■□□□□ 0.13
LIN28A-202ENST00000326279 RRP12Q5JTH9 1297 aaKnown RBP15.85■□□□□ 0.13
LIN28A-202ENST00000326279 C3P01024 1663 aa15.85■□□□□ 0.13
LIN28A-202ENST00000326279 ERVV-2B6SEH9 535 aa15.84■□□□□ 0.13
LIN28A-202ENST00000326279 SDSP20132 328 aa15.84■□□□□ 0.13
LIN28A-202ENST00000326279 SUCLG2Q96I99 432 aa15.84■□□□□ 0.13
LIN28A-202ENST00000326279 CDK12Q9NYV4 1490 aaPredicted RBP15.84■□□□□ 0.13
LIN28A-202ENST00000326279 ANKRD18BA2A2Z9 1011 aa15.84■□□□□ 0.13
LIN28A-202ENST00000326279 C6orf229H3BNL8 230 aa15.84■□□□□ 0.13
LIN28A-202ENST00000326279 DDX46Q7L014 1031 aaKnown RBP15.84■□□□□ 0.13
LIN28A-202ENST00000326279 USP44Q9H0E7 712 aa15.84■□□□□ 0.13
LIN28A-202ENST00000326279 CD163L1Q9NR16 1453 aa15.84■□□□□ 0.13
LIN28A-202ENST00000326279 ZNF853P0CG23 659 aa15.84■□□□□ 0.13
LIN28A-202ENST00000326279 BMP2KLQ5H9B9 411 aa15.84■□□□□ 0.13
LIN28A-202ENST00000326279 ERC1Q8IUD2 1116 aa15.84■□□□□ 0.13
LIN28A-202ENST00000326279 HSP90AB3PQ58FF7 597 aa15.84■□□□□ 0.13
LIN28A-202ENST00000326279 SOS2Q07890 1332 aaPredicted RBP15.84■□□□□ 0.13
LIN28A-202ENST00000326279 SYNE4Q8N205 404 aa15.83■□□□□ 0.13
LIN28A-202ENST00000326279 ARHGAP23Q9P227 1491 aa15.83■□□□□ 0.12
LIN28A-202ENST00000326279 PNPLA6Q8IY17 1366 aa15.83■□□□□ 0.12
LIN28A-202ENST00000326279 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.83■□□□□ 0.12
LIN28A-202ENST00000326279 VPS37CA5D8V6 355 aaPredicted RBP15.83■□□□□ 0.12
LIN28A-202ENST00000326279 MCTP1Q6DN14 999 aa15.83■□□□□ 0.12
LIN28A-202ENST00000326279 OVOS2A0A0J9YW53 1432 aa15.82■□□□□ 0.12
LIN28A-202ENST00000326279 OVOS2Q6IE36 1432 aa15.82■□□□□ 0.12
LIN28A-202ENST00000326279 GOLIM4O00461 696 aa15.82■□□□□ 0.12
LIN28A-202ENST00000326279 TRAPPC3LQ5T215 181 aa15.82■□□□□ 0.12
LIN28A-202ENST00000326279 DCTPP1Q9H773 170 aa15.82■□□□□ 0.12
LIN28A-202ENST00000326279 CCDC87Q9NVE4 849 aa15.82■□□□□ 0.12
LIN28A-202ENST00000326279 PPFIA3O75145 1194 aa15.82■□□□□ 0.12
LIN28A-202ENST00000326279 CDCA7Q9BWT1 371 aaPredicted RBP15.82■□□□□ 0.12
LIN28A-202ENST00000326279 RAI14Q9P0K7 980 aa15.82■□□□□ 0.12
LIN28A-202ENST00000326279 LRP2BPQ9P2M1 347 aa15.82■□□□□ 0.12
LIN28A-202ENST00000326279 USP31Q70CQ4 1352 aa15.82■□□□□ 0.12
LIN28A-202ENST00000326279 ATP8B2P98198 1209 aa15.82■□□□□ 0.12
LIN28A-202ENST00000326279 TBC1D32Q96NH3 1257 aa15.82■□□□□ 0.12
LIN28A-202ENST00000326279 MST1RQ04912 1400 aa15.82■□□□□ 0.12
LIN28A-202ENST00000326279 RPGRQ92834 1020 aaKnown RBP15.81■□□□□ 0.12
LIN28A-202ENST00000326279 GOLGA6L3A6NEY3 463 aa15.81■□□□□ 0.12
LIN28A-202ENST00000326279 IFIT1P09914 478 aaKnown RBP15.81■□□□□ 0.12
LIN28A-202ENST00000326279 METTL22Q9BUU2 404 aaPredicted RBP15.81■□□□□ 0.12
LIN28A-202ENST00000326279 CDC42BPGQ6DT37 1551 aa15.81■□□□□ 0.12
LIN28A-202ENST00000326279 DLC1Q96QB1 1528 aa15.81■□□□□ 0.12
LIN28A-202ENST00000326279 TAF5LO75529 589 aa15.8■□□□□ 0.12
LIN28A-202ENST00000326279 RXRBP28702 533 aa15.8■□□□□ 0.12
LIN28A-202ENST00000326279 CRKLP46109 303 aaKnown RBP15.8■□□□□ 0.12
LIN28A-202ENST00000326279 PDE1AP54750 535 aa15.8■□□□□ 0.12
LIN28A-202ENST00000326279 GNL2Q13823 731 aaKnown RBP15.8■□□□□ 0.12
LIN28A-202ENST00000326279 RABEP1Q15276 862 aa15.8■□□□□ 0.12
LIN28A-202ENST00000326279 ZRSR1Q15695 479 aaKnown RBP15.8■□□□□ 0.12
LIN28A-202ENST00000326279 TTC22Q5TAA0 569 aa15.8■□□□□ 0.12
LIN28A-202ENST00000326279 FAM196AQ6ZSG2 479 aa15.8■□□□□ 0.12
LIN28A-202ENST00000326279 PLBD2Q8NHP8 589 aa15.8■□□□□ 0.12
LIN28A-202ENST00000326279 IQGAP1P46940 1657 aa15.8■□□□□ 0.12
LIN28A-202ENST00000326279 GCKRQ14397 625 aa15.8■□□□□ 0.12
LIN28A-202ENST00000326279 SRP68Q9UHB9 627 aaKnown RBP15.8■□□□□ 0.12
LIN28A-202ENST00000326279 KRT27Q7Z3Y8 459 aa15.8■□□□□ 0.12
LIN28A-202ENST00000326279 DTNBO60941 627 aa15.79■□□□□ 0.12
LIN28A-202ENST00000326279 RBM5P52756 815 aaKnown RBP eCLIP15.79■□□□□ 0.12
LIN28A-202ENST00000326279 UTP14AQ9BVJ6 771 aaKnown RBP15.79■□□□□ 0.12
LIN28A-202ENST00000326279 ATG3Q9NT62 314 aa15.79■□□□□ 0.12
LIN28A-202ENST00000326279 NSFL1CQ9UNZ2 370 aaKnown RBP15.79■□□□□ 0.12
LIN28A-202ENST00000326279 SLIT1O75093 1534 aa15.79■□□□□ 0.12
LIN28A-202ENST00000326279 TFCP2Q12800 502 aa15.79■□□□□ 0.12
LIN28A-202ENST00000326279 PLEKHM2Q8IWE5 1019 aa15.79■□□□□ 0.12
LIN28A-202ENST00000326279 NLRP3Q96P20 1036 aa15.79■□□□□ 0.12
LIN28A-202ENST00000326279 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.79■□□□□ 0.12
LIN28A-202ENST00000326279 RTL1A6NKG5 1358 aa15.79■□□□□ 0.12
LIN28A-202ENST00000326279 K7ELQ4 463 aaPredicted RBP15.78■□□□□ 0.12
LIN28A-202ENST00000326279 ALDH1L1O75891 902 aa15.78■□□□□ 0.12
LIN28A-202ENST00000326279 STK3Q13188 491 aa15.78■□□□□ 0.12
LIN28A-202ENST00000326279 USPL1Q5W0Q7 1092 aa15.78■□□□□ 0.12
LIN28A-202ENST00000326279 MARCH10Q8NA82 808 aaPredicted RBP15.78■□□□□ 0.12
LIN28A-202ENST00000326279 RNF20Q5VTR2 975 aa15.78■□□□□ 0.12
LIN28A-202ENST00000326279 GJD4Q96KN9 370 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms