RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 CEP57L1Q8IYX8 460 aa18.1■□□□□ 0.49
GCFC2-201ENST00000321027 OFD1O75665 1012 aa18.1■□□□□ 0.49
GCFC2-201ENST00000321027 XBP1P17861 261 aa18.1■□□□□ 0.49
GCFC2-201ENST00000321027 UBE2HP62256 183 aa18.1■□□□□ 0.49
GCFC2-201ENST00000321027 SART3Q15020 963 aaKnown RBP18.1■□□□□ 0.49
GCFC2-201ENST00000321027 ZSCAN22P10073 491 aaPredicted RBP18.09■□□□□ 0.49
GCFC2-201ENST00000321027 HOXC9P31274 260 aa18.09■□□□□ 0.49
GCFC2-201ENST00000321027 A0A087WZG4 1122 aa18.09■□□□□ 0.49
GCFC2-201ENST00000321027 STARD3NLO95772 234 aa18.09■□□□□ 0.49
GCFC2-201ENST00000321027 HSPA2P54652 639 aa18.09■□□□□ 0.49
GCFC2-201ENST00000321027 CCT2P78371 535 aaKnown RBP18.09■□□□□ 0.49
GCFC2-201ENST00000321027 EVI5LQ96CN4 794 aa18.09■□□□□ 0.49
GCFC2-201ENST00000321027 BCORL1Q5H9F3 1711 aa18.09■□□□□ 0.49
GCFC2-201ENST00000321027 ZFYVE16Q7Z3T8 1539 aa18.08■□□□□ 0.49
GCFC2-201ENST00000321027 ATP5J2-PTCD1G3V325 749 aa18.08■□□□□ 0.49
GCFC2-201ENST00000321027 PDCL3Q9H2J4 239 aa18.08■□□□□ 0.49
GCFC2-201ENST00000321027 TTC12Q9H892 705 aaPredicted RBP18.08■□□□□ 0.49
GCFC2-201ENST00000321027 ADAMTS2O95450 1211 aa18.08■□□□□ 0.48
GCFC2-201ENST00000321027 BRMS1Q9HCU9 246 aa18.08■□□□□ 0.48
GCFC2-201ENST00000321027 PA2G4Q9UQ80 394 aaKnown RBP18.08■□□□□ 0.48
GCFC2-201ENST00000321027 PRDM15P57071 1507 aaPredicted RBP18.08■□□□□ 0.48
GCFC2-201ENST00000321027 PDCL2Q8N4E4 241 aa18.08■□□□□ 0.48
GCFC2-201ENST00000321027 ZBTB3Q9H5J0 574 aa18.08■□□□□ 0.48
GCFC2-201ENST00000321027 C19orf44Q9H6X5 657 aa18.08■□□□□ 0.48
GCFC2-201ENST00000321027 MSH6P52701 1360 aa18.08■□□□□ 0.48
GCFC2-201ENST00000321027 C16orf45Q96MC5 204 aaPredicted RBP18.07■□□□□ 0.48
GCFC2-201ENST00000321027 CPA1P15085 419 aa18.07■□□□□ 0.48
GCFC2-201ENST00000321027 CHMLP26374 656 aa18.07■□□□□ 0.48
GCFC2-201ENST00000321027 ANAPC15P60006 121 aa18.07■□□□□ 0.48
GCFC2-201ENST00000321027 SETQ01105 290 aaPredicted RBP18.07■□□□□ 0.48
GCFC2-201ENST00000321027 RUFY1Q96T51 708 aa18.07■□□□□ 0.48
GCFC2-201ENST00000321027 MPHOSPH8Q99549 860 aa18.07■□□□□ 0.48
GCFC2-201ENST00000321027 RBSNQ9H1K0 784 aa18.07■□□□□ 0.48
GCFC2-201ENST00000321027 CBX1P83916 185 aa18.07■□□□□ 0.48
GCFC2-201ENST00000321027 DNM1Q05193 864 aaKnown RBP18.07■□□□□ 0.48
GCFC2-201ENST00000321027 ORAI2Q96SN7 254 aa18.06■□□□□ 0.48
GCFC2-201ENST00000321027 NPHP3Q7Z494 1330 aa18.06■□□□□ 0.48
GCFC2-201ENST00000321027 ZKSCAN5Q9Y2L8 839 aa18.06■□□□□ 0.48
GCFC2-201ENST00000321027 ADCY10Q96PN6 1610 aa18.06■□□□□ 0.48
GCFC2-201ENST00000321027 AKAP4Q5JQC9 854 aa18.06■□□□□ 0.48
GCFC2-201ENST00000321027 UBE3BQ7Z3V4 1068 aa18.06■□□□□ 0.48
GCFC2-201ENST00000321027 PHAXQ9H814 394 aaKnown RBP18.06■□□□□ 0.48
GCFC2-201ENST00000321027 LRRC2Q9BYS8 371 aa18.05■□□□□ 0.48
GCFC2-201ENST00000321027 CTDP1Q9Y5B0 961 aaPredicted RBP18.05■□□□□ 0.48
GCFC2-201ENST00000321027 JMYQ8N9B5 988 aa18.05■□□□□ 0.48
GCFC2-201ENST00000321027 CCDC43Q96MW1 224 aaKnown RBP18.05■□□□□ 0.48
GCFC2-201ENST00000321027 IDH1O75874 414 aaKnown RBP18.05■□□□□ 0.48
GCFC2-201ENST00000321027 MCM5P33992 734 aa18.05■□□□□ 0.48
GCFC2-201ENST00000321027 ZNF165P49910 485 aa18.05■□□□□ 0.48
GCFC2-201ENST00000321027 PDIA4P13667 645 aaKnown RBP18.04■□□□□ 0.48
GCFC2-201ENST00000321027 AK2P54819 239 aa18.04■□□□□ 0.48
GCFC2-201ENST00000321027 RBM8AQ9Y5S9 174 aaKnown RBP18.04■□□□□ 0.48
GCFC2-201ENST00000321027 METP08581 1390 aa18.04■□□□□ 0.48
GCFC2-201ENST00000321027 PLEKHG3A1L390 1219 aa18.04■□□□□ 0.48
GCFC2-201ENST00000321027 GSPT1P15170 499 aaKnown RBP18.04■□□□□ 0.48
GCFC2-201ENST00000321027 IP6K1Q92551 441 aa18.04■□□□□ 0.48
GCFC2-201ENST00000321027 CLIP2Q9UDT6 1046 aa18.04■□□□□ 0.48
GCFC2-201ENST00000321027 MYOM2P54296 1465 aa18.03■□□□□ 0.48
GCFC2-201ENST00000321027 TRMT1Q9NXH9 659 aaKnown RBP18.03■□□□□ 0.48
GCFC2-201ENST00000321027 U3KPZ7 1027 aaPredicted RBP18.03■□□□□ 0.48
GCFC2-201ENST00000321027 SNRPA1P09661 255 aaKnown RBP18.03■□□□□ 0.48
GCFC2-201ENST00000321027 PIP4K2AP48426 406 aaPredicted RBP18.03■□□□□ 0.48
GCFC2-201ENST00000321027 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.03■□□□□ 0.48
GCFC2-201ENST00000321027 IFIT1P09914 478 aaKnown RBP18.03■□□□□ 0.48
GCFC2-201ENST00000321027 CTNNA3Q9UI47 895 aa18.03■□□□□ 0.48
GCFC2-201ENST00000321027 CAGE1Q8TC20 777 aa18.03■□□□□ 0.48
GCFC2-201ENST00000321027 NUP133Q8WUM0 1156 aa18.03■□□□□ 0.48
GCFC2-201ENST00000321027 CHAMP1Q96JM3 812 aa18.03■□□□□ 0.48
GCFC2-201ENST00000321027 KDM5AP29375 1690 aaKnown RBP18.02■□□□□ 0.48
GCFC2-201ENST00000321027 CHL1O00533 1208 aa18.02■□□□□ 0.48
GCFC2-201ENST00000321027 PKP1Q13835 747 aa18.02■□□□□ 0.48
GCFC2-201ENST00000321027 ANKRD13DQ6ZTN6 518 aa18.02■□□□□ 0.48
GCFC2-201ENST00000321027 DDX46Q7L014 1031 aaKnown RBP18.02■□□□□ 0.48
GCFC2-201ENST00000321027 COPS6Q7L5N1 327 aa18.02■□□□□ 0.48
GCFC2-201ENST00000321027 ACBD3Q9H3P7 528 aa18.02■□□□□ 0.48
GCFC2-201ENST00000321027 SNRKQ9NRH2 765 aa18.02■□□□□ 0.48
GCFC2-201ENST00000321027 GOLIM4O00461 696 aa18.02■□□□□ 0.47
GCFC2-201ENST00000321027 XAGE3Q8WTP9 111 aa18.02■□□□□ 0.47
GCFC2-201ENST00000321027 GAS2L3Q86XJ1 694 aa18.01■□□□□ 0.47
GCFC2-201ENST00000321027 RAB11FIP4Q86YS3 637 aa18.01■□□□□ 0.47
GCFC2-201ENST00000321027 MAP3K5Q99683 1374 aa18.01■□□□□ 0.47
GCFC2-201ENST00000321027 PNMA6EA0A0J9YXQ4 647 aa18.01■□□□□ 0.47
GCFC2-201ENST00000321027 F13A1P00488 732 aa18.01■□□□□ 0.47
GCFC2-201ENST00000321027 BRF1Q92994 677 aa18.01■□□□□ 0.47
GCFC2-201ENST00000321027 PLEKHF1Q96S99 279 aa18.01■□□□□ 0.47
GCFC2-201ENST00000321027 CWF19L2Q2TBE0 894 aaKnown RBP18.01■□□□□ 0.47
GCFC2-201ENST00000321027 FILIP1LQ4L180 1135 aa18.01■□□□□ 0.47
GCFC2-201ENST00000321027 METTL24Q5JXM2 366 aa18.01■□□□□ 0.47
GCFC2-201ENST00000321027 ANTXR1Q9H6X2 564 aa18.01■□□□□ 0.47
GCFC2-201ENST00000321027 BIN1O00499 593 aa18.01■□□□□ 0.47
GCFC2-201ENST00000321027 CD2BP2O95400 341 aaKnown RBP18.01■□□□□ 0.47
GCFC2-201ENST00000321027 TNNT1P13805 278 aa18.01■□□□□ 0.47
GCFC2-201ENST00000321027 GPTP24298 496 aa18.01■□□□□ 0.47
GCFC2-201ENST00000321027 IMMTQ16891 758 aaKnown RBP18.01■□□□□ 0.47
GCFC2-201ENST00000321027 NFATC2IPQ8NCF5 419 aa18.01■□□□□ 0.47
GCFC2-201ENST00000321027 DDX19AQ9NUU7 478 aaKnown RBP18.01■□□□□ 0.47
GCFC2-201ENST00000321027 KAT6BQ8WYB5 2073 aa18■□□□□ 0.47
GCFC2-201ENST00000321027 IKQ13123 557 aaPredicted RBP18■□□□□ 0.47
GCFC2-201ENST00000321027 PTPN14Q15678 1187 aa18■□□□□ 0.47
GCFC2-201ENST00000321027 CT47A1Q5JQC4 288 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms