RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 MED12Q93074 2177 aa4.36□□□□□ -1.71
GEN1-201ENST00000317402 SYCE3A1L190 88 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 SKOR2Q2VWA4 1001 aaPredicted RBP4.35□□□□□ -1.71
GEN1-201ENST00000317402 CFAP53Q96M91 514 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 FRMPD1Q5SYB0 1578 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 A0A1W2PP64 1363 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 DNAJC25Q9H1X3 360 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 POLKQ9UBT6 870 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 METP08581 1390 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 ZFYVE16Q7Z3T8 1539 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 KCNJ4P48050 445 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 LMOD3Q0VAK6 560 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 ST3GAL1Q11201 340 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 TTC12Q9H892 705 aaPredicted RBP4.35□□□□□ -1.71
GEN1-201ENST00000317402 NSD2O96028 1365 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 HDGFP51858 240 aaKnown RBP4.35□□□□□ -1.71
GEN1-201ENST00000317402 GTF3C1Q12789 2109 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 ITSN1Q15811 1721 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 CBX1P83916 185 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 CENPQQ7L2Z9 268 aaPredicted RBP4.35□□□□□ -1.71
GEN1-201ENST00000317402 GTF2A1P52655 376 aaPredicted RBP4.35□□□□□ -1.71
GEN1-201ENST00000317402 GPS2Q13227 327 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 ATP2B3Q16720 1220 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 KIAA1211Q6ZU35 1233 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 ASXL2Q76L83 1435 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 SLX4Q8IY92 1834 aa4.35□□□□□ -1.71
GEN1-201ENST00000317402 SYAP1Q96A49 352 aaPredicted RBP4.35□□□□□ -1.71
GEN1-201ENST00000317402 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.35□□□□□ -1.71
GEN1-201ENST00000317402 ADGRL1O94910 1474 aa4.34□□□□□ -1.71
GEN1-201ENST00000317402 RPGRIP1LQ68CZ1 1315 aa4.34□□□□□ -1.71
GEN1-201ENST00000317402 ZBTB7BO15156 539 aaPredicted RBP4.34□□□□□ -1.71
GEN1-201ENST00000317402 HTATSF1O43719 755 aaKnown RBP4.34□□□□□ -1.71
GEN1-201ENST00000317402 ADCK5Q3MIX3 580 aa4.34□□□□□ -1.71
GEN1-201ENST00000317402 DRC7Q8IY82 874 aa4.34□□□□□ -1.71
GEN1-201ENST00000317402 DICER1Q9UPY3 1922 aaKnown RBP4.34□□□□□ -1.71
GEN1-201ENST00000317402 SPEF2Q9C093 1822 aa4.34□□□□□ -1.71
GEN1-201ENST00000317402 SLURP2P0DP57 97 aa4.34□□□□□ -1.71
GEN1-201ENST00000317402 MRPL50Q8N5N7 158 aaKnown RBP4.34□□□□□ -1.71
GEN1-201ENST00000317402 EFCAB6Q5THR3 1501 aa4.34□□□□□ -1.71
GEN1-201ENST00000317402 GOLGA6L4A6NEF3 574 aa4.34□□□□□ -1.71
GEN1-201ENST00000317402 MTHFSDQ2M296 383 aaKnown RBP4.34□□□□□ -1.71
GEN1-201ENST00000317402 ATG2BQ96BY7 2078 aa4.34□□□□□ -1.71
GEN1-201ENST00000317402 DZIP1LQ8IYY4 767 aaKnown RBP4.34□□□□□ -1.71
GEN1-201ENST00000317402 HEATR5BQ9P2D3 2071 aa4.34□□□□□ -1.71
GEN1-201ENST00000317402 MVPQ14764 893 aaKnown RBP4.34□□□□□ -1.71
GEN1-201ENST00000317402 RASEFQ8IZ41 740 aa4.34□□□□□ -1.71
GEN1-201ENST00000317402 BLMP54132 1417 aaPredicted RBP4.34□□□□□ -1.71
GEN1-201ENST00000317402 MARCH10Q8NA82 808 aaPredicted RBP4.34□□□□□ -1.71
GEN1-201ENST00000317402 RDXP35241 583 aaKnown RBP4.34□□□□□ -1.72
GEN1-201ENST00000317402 ESCO1Q5FWF5 840 aa4.34□□□□□ -1.72
GEN1-201ENST00000317402 PYCARDQ9ULZ3 195 aa4.34□□□□□ -1.72
GEN1-201ENST00000317402 CNPY2Q9Y2B0 182 aa4.34□□□□□ -1.72
GEN1-201ENST00000317402 USP27XA6NNY8 438 aa4.34□□□□□ -1.72
GEN1-201ENST00000317402 PTH1RQ03431 593 aa4.34□□□□□ -1.72
GEN1-201ENST00000317402 HSP90AB1P08238 724 aaKnown RBP4.33□□□□□ -1.72
GEN1-201ENST00000317402 MCCP23508 829 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 ARID4AP29374 1257 aaPredicted RBP4.33□□□□□ -1.72
GEN1-201ENST00000317402 CWF19L2Q2TBE0 894 aaKnown RBP4.33□□□□□ -1.72
GEN1-201ENST00000317402 NUDT16Q96DE0 195 aaKnown RBP4.33□□□□□ -1.72
GEN1-201ENST00000317402 TFIP11Q9UBB9 837 aaKnown RBP4.33□□□□□ -1.72
GEN1-201ENST00000317402 ZDBF2Q9HCK1 2354 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 UQCRHLA0A096LP55 91 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 UQCRHP07919 91 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 TDO2P48775 406 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 GBP4Q96PP9 640 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 GRPEL1Q9HAV7 217 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 ZNFX1Q9P2E3 1918 aaKnown RBP4.33□□□□□ -1.72
GEN1-201ENST00000317402 ZNF622Q969S3 477 aaKnown RBP eCLIP4.33□□□□□ -1.72
GEN1-201ENST00000317402 POLR2AP24928 1970 aaKnown RBP4.33□□□□□ -1.72
GEN1-201ENST00000317402 VAMP4O75379 141 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 ANK1P16157 1881 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 PPRC1Q5VV67 1664 aaKnown RBP4.33□□□□□ -1.72
GEN1-201ENST00000317402 ERICH4A6NGS2 130 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 SDSP20132 328 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 HSCBQ8IWL3 235 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 LRMPQ12912 555 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 GIMAP6Q6P9H5 292 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 PAIP2Q9BPZ3 127 aaKnown RBP4.33□□□□□ -1.72
GEN1-201ENST00000317402 SHANK1Q9Y566 2161 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 FREM3P0C091 2139 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 MROH2AA6NES4 1674 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 BANK1Q8NDB2 785 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 NGDNQ8NEJ9 315 aaKnown RBP4.33□□□□□ -1.72
GEN1-201ENST00000317402 CCDC8Q9H0W5 538 aaPredicted RBP4.33□□□□□ -1.72
GEN1-201ENST00000317402 PRM3Q9NNZ6 103 aa4.33□□□□□ -1.72
GEN1-201ENST00000317402 GOLIM4O00461 696 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 ZNF710Q8N1W2 664 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 MPHOSPH10O00566 681 aaKnown RBP4.32□□□□□ -1.72
GEN1-201ENST00000317402 ADAMTS3O15072 1205 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 DIAPH1O60610 1272 aaKnown RBP4.32□□□□□ -1.72
GEN1-201ENST00000317402 CHD1LQ86WJ1 897 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 TMX4Q9H1E5 349 aaPredicted RBP4.32□□□□□ -1.72
GEN1-201ENST00000317402 SOS1Q07889 1333 aaPredicted RBP4.32□□□□□ -1.72
GEN1-201ENST00000317402 ATP5J2-PTCD1G3V325 749 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 PTCD1O75127 700 aaKnown RBP4.32□□□□□ -1.72
GEN1-201ENST00000317402 PROSER2Q86WR7 435 aaPredicted RBP4.32□□□□□ -1.72
GEN1-201ENST00000317402 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.32□□□□□ -1.72
GEN1-201ENST00000317402 ZBTB40Q9NUA8 1239 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 MSH6P52701 1360 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 ZFYVE9O95405 1425 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms